- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 13 x CU: COPPER (II) ION(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 10 residues within 4Å:- Chain A: H.54, H.55, H.125, E.207, H.300, F.355, H.356, H.401, H.447
- Ligands: CU.1
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:E.207, A:H.401
- Water bridges: A:K.22, A:H.447
- Salt bridges: A:H.54, A:H.55, A:H.125, A:H.300, A:H.356, A:H.447
SO4.9: 10 residues within 4Å:- Chain B: H.54, H.55, V.124, H.125, F.355, H.356, H.401, H.447
- Ligands: CU.5, CU.6
8 PLIP interactions:8 interactions with chain B- Water bridges: B:K.22, B:R.249, B:R.249
- Salt bridges: B:H.54, B:H.55, B:H.125, B:H.356, B:H.447
SO4.13: 1 residues within 4Å:- Chain C: R.318
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:R.318
SO4.14: 4 residues within 4Å:- Chain C: K.102, Q.111
- Ligands: EDO.17, EDO.18
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Q.111
- Water bridges: C:K.102, C:K.102, C:K.102
- Salt bridges: C:K.102
SO4.15: 7 residues within 4Å:- Chain C: H.54, H.55, H.300, H.356, H.401, H.447
- Ligands: CU.10
6 PLIP interactions:6 interactions with chain C- Water bridges: C:K.22, C:K.22
- Salt bridges: C:H.55, C:H.356, C:H.401, C:H.447
SO4.16: 6 residues within 4Å:- Chain C: G.47, D.48, T.49, C.50, G.93, K.97
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:D.48, C:T.49, C:C.50
- Water bridges: C:T.49, C:E.94, C:G.95
- Salt bridges: C:K.97
SO4.22: 8 residues within 4Å:- Chain D: H.54, H.55, H.125, H.356, H.401, H.447
- Ligands: CU.19, CU.20
5 PLIP interactions:5 interactions with chain D- Water bridges: D:K.22
- Salt bridges: D:H.55, D:H.356, D:H.401, D:H.447
SO4.23: 5 residues within 4Å:- Chain D: G.47, D.48, T.49, C.50, K.97
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:D.48, D:D.48, D:T.49, D:C.50
- Water bridges: D:G.95, D:K.97, D:K.97
- Salt bridges: D:K.97
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.17: 3 residues within 4Å:- Chain C: R.112
- Ligands: SO4.14, EDO.18
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:R.112, C:R.112
- Water bridges: C:Q.111
EDO.18: 8 residues within 4Å:- Chain C: E.69, R.100, Q.111, R.112, R.150, D.153
- Ligands: SO4.14, EDO.17
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:R.112, C:D.153
- Water bridges: C:E.69, C:K.102
EDO.24: 2 residues within 4Å:- Chain D: R.112
- Ligands: EDO.25
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:R.112, D:R.112
EDO.25: 7 residues within 4Å:- Chain D: E.69, R.100, Q.111, R.112, R.150, D.153
- Ligands: EDO.24
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:R.112, D:D.153
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tikhonova, T.V. et al., Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2019-04-10
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 13 x CU: COPPER (II) ION(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tikhonova, T.V. et al., Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2019-04-10
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D