SMTL ID : 6gzo.2 (1 other biounit)

Crystal structure of NadR protein in complex with NAD and AMP-PNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 8 residues within 4Å: Chain A: K.65, Y.69, R.177, Y.240, N.243, S.244, R.293 Ligands: NAD.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:Y.69, A:Y.69, A:Y.69, A:R.177, A:R.177, A:R.177, A:S.244, A:D.291, A:R.293, A:R.293 Salt bridges: A:K.65

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.2: 10 residues within 4Å: Chain A: R.177, V.182, Y.240, N.243, S.244, L.258, D.291, E.292, R.293 Ligands: ANP.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.240, A:S.244, A:R.293 Salt bridges: A:R.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stetsenko, A. et al., Structural and Functional Characterization of NadR fromLactococcus lactis. Molecules (2020)

Release Date

2019-07-17

Peptides

Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase

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