SMTL ID : 6h9c.1

Cryo-EM structure of archaeal extremophilic internal membrane-containing Haloarcula californiae icosahedral virus 1 (HCIV-1) at 3.74 Angstroms resolution.

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 3.74 Å

Oligo State

hetero-15-1-1-1-1-1-12-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Santos-Perez, I. et al., Structural basis for assembly of vertical single beta-barrel viruses. Nat Commun (2019)

Release Date

2019-03-27

Peptides

VP7: ASTUVWXYZ012345
VP9: B
GPS-III molecule located underneath the capsomer close to the icosahedral three-fold axis.: C
GPS-II protein located underneath the two-tower capsomer NOT sitting on the icosahedral 2-fold axis.: D
(Half) GPS-II protein located underneath the two-tower capsomer sitting ON the icosahedral 2-fold axis.: E
Peripentonal unknown polypeptide: F
VP4: GHIJKLMNOPQR

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

S
F

T
E

U
R

V
T

W
S

X
W

Y
K

Z
J

0
M

1
N

2
I

3
L

4
a

5
Y

B
b

C
c

D
d

E
e

F
f

G
Z

H
A

I
B

J
C

K
P

L
Q

M
O

N
V

O
U

P
H

Q
G

R
X

VP7

VP9

GPS-III molecule located underneath the capsomer close to the icosahedral three-fold axis.

GPS-II protein located underneath the two-tower capsomer NOT sitting on the icosahedral 2-fold axis.

(Half) GPS-II protein located underneath the two-tower capsomer sitting ON the icosahedral 2-fold axis.

Peripentonal unknown polypeptide

VP4

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