SMTL ID : 6hc8.1

Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.200, D.202, H.280 Ligands: OGA.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.200, A:D.202, A:H.280, H2O.3 ZN.7: 4 residues within 4Å: Chain C: H.200, D.202, H.280 Ligands: OGA.8 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.200, C:D.202, C:H.280, H2O.9

2 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.2: 13 residues within 4Å: Chain A: Y.146, L.189, T.197, H.200, D.202, N.206, F.208, K.215, H.280, I.282, N.295, W.297 Ligands: ZN.1 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:T.197, A:N.206, A:N.295 Salt bridges: A:K.215, A:H.280 Water bridges: B:N.24 OGA.8: 13 residues within 4Å: Chain C: Y.146, L.189, T.197, H.200, D.202, N.206, F.208, K.215, H.280, I.282, N.295, W.297 Ligands: ZN.7 8 PLIP interactions: 7 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:Y.146, C:T.197, C:T.197, C:N.206, C:N.295 Salt bridges: C:K.215, C:H.280 Water bridges: D:N.24

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.139, G.141, E.142, E.143 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.142, A:E.143 Salt bridges: A:R.139 SO4.9: 4 residues within 4Å: Chain C: R.139, G.141, E.142, E.143 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:E.142, C:E.143, C:E.143 Salt bridges: C:R.139

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: K.100, L.102, Y.231, S.241, Q.242, V.243, D.244 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.231, A:Y.231, A:Q.242 Water bridges: A:S.241, A:F.245 GOL.5: 2 residues within 4Å: Chain A: F.163, W.168 No protein-ligand interaction detected (PLIP) GOL.6: 3 residues within 4Å: Chain A: D.223, K.312, A.313 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.223, A:A.313 Water bridges: A:H.314 GOL.10: 7 residues within 4Å: Chain C: K.100, L.102, Y.231, S.241, Q.242, V.243, D.244 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:Y.231, C:Q.242 Water bridges: C:S.241, C:F.245 GOL.11: 2 residues within 4Å: Chain C: F.163, W.168 No protein-ligand interaction detected (PLIP) GOL.12: 3 residues within 4Å: Chain C: D.223, K.312, A.313 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:D.223, C:D.223, C:A.313

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leissing, T.M. et al., Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339). To Be Published

Release Date

2019-08-28

Peptides

Hypoxia-inducible factor 1-alpha inhibitor: AC
Transient receptor potential cation channel subfamily A member 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
E

D
E

Hypoxia-inducible factor 1-alpha inhibitor

Transient receptor potential cation channel subfamily A member 1

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