SMTL ID : 6hpr.1

Crystal structure of cIAP1 RING domain bound to UbcH5B-Ub and a non-covalent Ub

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-2-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.18, C.21, C.39, C.42 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:C.39, A:C.42 ZN.2: 4 residues within 4Å: Chain A: C.33, H.35, C.49, C.52 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.33, A:H.35, A:C.49, A:C.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, A. et al., Structural insights into non-covalent ubiquitin activation of the cIAP1-UbcH5B∼ubiquitin complex. J. Biol. Chem. (2019)

Release Date

2018-12-12

Peptides

Baculoviral IAP repeat-containing protein 2: A
Polyubiquitin-B: BD
Ubiquitin-conjugating enzyme E2 D2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
D

C
C

Baculoviral IAP repeat-containing protein 2

Polyubiquitin-B

Ubiquitin-conjugating enzyme E2 D2

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