- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 4.00 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 93 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
CLA.1: 22 residues within 4Å:- Chain A: Y.599, N.600, I.604, F.607, W.645, L.650, A.654, I.658, F.672, H.676, F.679, Y.731, G.735, T.738, T.739, F.742
- Chain B: F.617, L.621, W.622
- Ligands: CLA.2, CLA.57, CLA.58
16 PLIP interactions:11 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:F.607, A:W.645, A:L.650, A:A.654, A:I.658, A:F.672, A:F.679, A:F.742, B:F.617, B:F.617, B:L.621, B:L.621, B:W.622
- Hydrogen bonds: A:Y.599
- pi-Stacking: A:F.672
- Metal complexes: A:H.676
CLA.2: 21 residues within 4Å:- Chain A: I.670, L.673, A.674, H.676, F.677, F.679, A.680
- Chain B: V.436, L.522, F.578, W.579, N.582, W.586, L.613, F.617, L.621, F.710
- Ligands: CLA.1, CLA.3, 45D.55, CLA.57
13 PLIP interactions:7 interactions with chain B, 6 interactions with chain A,- Hydrophobic interactions: B:V.436, B:L.522, B:W.579, B:N.582, B:L.613, B:F.710, A:L.673, A:H.676, A:F.677, A:F.679, A:A.680
- pi-Stacking: B:W.586
- Salt bridges: A:H.676
CLA.3: 27 residues within 4Å:- Chain A: F.677, A.680, F.681, L.683, M.684, F.687, Y.692, W.693, L.696
- Chain B: S.421, S.424, L.425, G.428, F.429, L.432, L.522, T.526, L.529, I.530, L.575, F.578, W.579
- Ligands: CLA.2, CLA.40, PQN.42, 45D.55, BCR.116
17 PLIP interactions:8 interactions with chain B, 9 interactions with chain A,- Hydrophobic interactions: B:L.425, B:F.429, B:T.526, B:I.530, B:L.575, B:L.575, B:F.578, A:F.677, A:A.680, A:F.681, A:L.683, A:F.687, A:Y.692, A:W.693
- pi-Stacking: B:W.579, A:W.693
- Hydrogen bonds: A:Y.692
CLA.4: 20 residues within 4Å:- Chain A: W.28, F.34, H.52, A.55, H.56, F.58, A.75, G.78, H.79, L.173
- Ligands: CLA.5, CLA.6, CLA.7, CLA.8, CLA.11, CLA.30, LHG.48, CLA.50, BCR.51, BCR.124
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:F.34, A:H.52, A:L.173
- pi-Stacking: A:H.56
CLA.5: 20 residues within 4Å:- Chain A: H.56, F.58, I.72, A.75, H.76, H.79, L.80, W.348, H.349, Q.351, L.352, N.355, L.356, L.359
- Ligands: CLA.4, CLA.6, CLA.13, CLA.25, CLA.30, BCR.45
15 PLIP interactions:15 interactions with chain A,- Hydrophobic interactions: A:F.58, A:I.72, A:I.72, A:A.75, A:L.80, A:W.348, A:Q.351, A:L.352, A:L.352, A:L.352
- Hydrogen bonds: A:N.355
- Salt bridges: A:H.79
- pi-Stacking: A:H.79
- pi-Cation interactions: A:H.76
- Metal complexes: A:H.76
CLA.6: 15 residues within 4Å:- Chain A: H.56, H.79, V.82, V.83, W.86, L.359, L.400
- Ligands: CLA.4, CLA.5, CLA.8, CLA.29, CLA.30, BCR.45, LHG.48, BCR.51
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:V.83, A:W.86, A:W.86, A:L.359, A:L.400
- Salt bridges: A:H.56
CLA.7: 21 residues within 4Å:- Chain A: V.85, W.86, S.88, G.89, F.92, H.93, F.97, Q.115, W.118
- Chain H: L.8, V.13, M.16, A.17, T.20
- Ligands: CLA.4, CLA.8, CLA.9, BCR.51, LMT.118, CLA.123, BCR.124
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: A:F.92, A:F.92, A:F.92, A:F.97, H:L.8, H:V.13
- Salt bridges: A:H.93
- pi-Stacking: A:H.93, A:H.93
- Metal complexes: A:H.93
CLA.8: 25 residues within 4Å:- Chain A: V.82, W.86, M.90, A.114, Q.115, I.137, Q.138, I.139, T.140, S.141, L.143, A.667, Y.668, W.740
- Ligands: CLA.4, CLA.6, CLA.7, CLA.9, CLA.11, CLA.28, CLA.30, CLA.40, LHG.48, BCR.51, 45D.55
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:V.82, A:I.137, A:A.667, A:Y.668, A:Y.668, A:W.740
- Hydrogen bonds: A:T.140, A:S.141, A:S.141
CLA.9: 19 residues within 4Å:- Chain A: Q.115, V.116, V.117, W.118, V.121, Q.123, L.126, I.137, A.667, M.671
- Chain B: V.440, F.444
- Chain H: I.27
- Ligands: CLA.7, CLA.8, CLA.28, BCR.51, CLA.89, BCR.124
10 PLIP interactions:1 interactions with chain H, 7 interactions with chain A, 2 interactions with chain B,- Hydrophobic interactions: H:I.27, A:V.117, A:V.121, A:L.126, A:I.137, A:A.667, B:V.440
- Hydrogen bonds: A:Q.115, A:W.118
- pi-Stacking: B:F.444
CLA.10: 15 residues within 4Å:- Chain A: E.7, R.8, V.14, V.16, F.73, F.77, L.171, F.174, A.175, F.178, H.179, K.183, W.189
- Ligands: CLA.12, CLA.13
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:R.8, A:V.14, A:F.73, A:F.77, A:F.174, A:A.175, A:F.178
- Salt bridges: A:R.8, A:K.183
- pi-Stacking: A:H.179
- pi-Cation interactions: A:R.8, A:R.8, A:R.8
CLA.11: 21 residues within 4Å:- Chain A: V.21, T.23, S.24, F.25, K.27, W.28, H.33, K.71, S.74, G.78, V.82, V.85, L.173, G.176, W.177, Y.180, H.181
- Chain H: F.7
- Ligands: CLA.4, CLA.8, CLA.50
16 PLIP interactions:15 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: A:T.23, A:K.27, A:W.28, A:W.28, A:V.82, A:V.85, A:W.177, A:Y.180, A:Y.180, H:F.7
- Hydrogen bonds: A:K.71, A:Y.180
- Salt bridges: A:K.27, A:H.33, A:K.71
- pi-Stacking: A:H.181
CLA.12: 15 residues within 4Å:- Chain A: A.10, K.11, A.12, K.13, V.14, W.189, N.192, S.195, H.199, T.313, N.314, W.315
- Ligands: CLA.10, CLA.13, CLA.20
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:A.12, A:W.315, A:W.315
- Hydrogen bonds: A:S.195
- Salt bridges: A:H.199
- pi-Stacking: A:H.199, A:H.199, A:H.199
CLA.13: 16 residues within 4Å:- Chain A: F.73, H.76, F.77, L.80, W.189, F.190, M.196, H.199, H.200, G.203, L.204
- Ligands: CLA.5, CLA.10, CLA.12, CLA.25, BCR.45
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:F.73, A:L.80, A:W.189, A:W.189, A:F.190, A:M.196
- Hydrogen bonds: A:H.76
- Salt bridges: A:H.76
- pi-Stacking: A:H.200
CLA.14: 15 residues within 4Å:- Chain A: S.150, G.151, F.152, Q.157, C.160, T.161, G.211, W.212, H.215, V.219, P.239, H.240
- Ligands: CLA.15, CLA.16, BCR.45
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:T.161, A:W.212, A:W.212, A:H.215, A:P.239, A:H.240
- pi-Cation interactions: A:H.215
CLA.15: 13 residues within 4Å:- Chain A: L.210, G.214, I.217, H.218, I.243, P.246, M.249, F.256, L.260, F.274, L.298
- Ligands: CLA.14, BCR.44
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.210, A:I.217, A:I.243, A:F.256, A:F.256, A:F.274, A:L.298, A:L.298
- pi-Stacking: A:H.218, A:H.218
CLA.16: 4 residues within 4Å:- Chain A: H.240, I.243
- Ligands: CLA.14, BCR.45
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:H.240, A:I.243
- Salt bridges: A:H.240
- pi-Stacking: A:H.240, A:H.240
CLA.17: 19 residues within 4Å:- Chain A: F.263, W.268, G.269, Y.271, S.272, L.275, F.277, H.295, L.298, A.299, V.302, N.500
- Chain I: A.61, L.65
- Ligands: CLA.18, CLA.34, BCR.44, CLA.125, BCR.127
21 PLIP interactions:20 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:F.263, A:W.268, A:W.268, A:W.268, A:W.268, A:W.268, A:Y.271, A:L.275, A:L.298, A:L.298, A:A.299, A:V.302, A:V.302, I:A.61
- Hydrogen bonds: A:N.500
- Salt bridges: A:H.295
- pi-Stacking: A:W.268, A:H.295, A:H.295, A:H.295
- Metal complexes: A:H.295
CLA.18: 17 residues within 4Å:- Chain A: F.277, G.279, L.288, D.292, H.295, H.296, A.299, I.300, L.303, H.369, M.373, P.375, A.505
- Ligands: CLA.17, CLA.19, CLA.27, CLA.33
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.277, A:L.288, A:L.288, A:D.292, A:A.299, A:I.300, A:L.303
- pi-Cation interactions: A:H.296
CLA.19: 18 residues within 4Å:- Chain A: L.146, A.149, L.205, G.208, S.209, W.212, Q.216, L.288, H.296, H.297, I.300, F.304, V.366, M.370, P.375, Y.376
- Ligands: CLA.18, CLA.29
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:L.205, A:W.212, A:L.288, A:I.300, A:F.304, A:V.366, A:P.375, A:Y.376
- Salt bridges: A:H.297
- pi-Stacking: A:W.212, A:H.296
- pi-Cation interactions: A:H.297
CLA.20: 19 residues within 4Å:- Chain A: N.198, H.199, A.202, G.203, L.207, H.309, Y.311, T.313, W.315, I.317
- Chain I: D.32, L.46, P.47, L.50, A.51
- Ligands: CLA.12, BCR.44, CLA.126, BCR.127
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:A.202, A:L.207, A:L.207, I:L.50
- Hydrogen bonds: A:N.198, A:T.313
- pi-Stacking: A:H.309
- Metal complexes: A:H.309
CLA.21: 14 residues within 4Å:- Chain A: M.197, L.201, L.205, L.303, F.304, A.307, M.310, Y.311, M.321, I.324
- Ligands: CLA.22, CLA.23, CLA.24, CLA.25
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.201, A:L.205, A:F.304, A:F.304, A:A.307
CLA.22: 11 residues within 4Å:- Chain A: I.306, H.309, M.310, G.318, H.319
- Chain I: A.23, I.24, Q.25
- Ligands: CLA.21, CLA.23, BCR.44
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.306, A:M.310
- Hydrogen bonds: A:G.318
- Salt bridges: A:H.319
- pi-Stacking: A:H.319
CLA.23: 8 residues within 4Å:- Chain A: H.319, I.324, A.327, H.328
- Ligands: CLA.21, CLA.22, CLA.24, CLA.41
2 PLIP interactions:2 interactions with chain A,- pi-Cation interactions: A:H.328, A:H.328
CLA.24: 15 residues within 4Å:- Chain A: I.324, L.325, H.337, L.340, L.425, M.429
- Ligands: CLA.21, CLA.23, CLA.25, CLA.31, CLA.37, CLA.41, BCR.46, BCR.47, LHG.49
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.425
- Salt bridges: A:H.328
- pi-Stacking: A:H.337
- Metal complexes: A:H.337
CLA.25: 17 residues within 4Å:- Chain A: H.76, V.193, M.196, M.197, H.200, M.321, L.344, W.348, Q.351, I.354, N.355, L.358
- Ligands: CLA.5, CLA.13, CLA.21, CLA.24, BCR.46
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:V.193, A:L.344, A:L.344, A:W.348, A:Q.351, A:I.354, A:N.355, A:L.358, A:L.358, A:L.358
- Hydrogen bonds: A:H.200
- Salt bridges: A:H.200
CLA.26: 13 residues within 4Å:- Chain A: S.361, I.364, I.365, Q.368, I.401, I.542, T.545
- Ligands: CLA.27, CLA.35, CLA.36, CLA.37, BCR.47, LHG.49
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:I.364, A:I.364, A:I.401
- Hydrogen bonds: A:Q.368
CLA.27: 15 residues within 4Å:- Chain A: L.358, L.362, I.365, Q.368, H.369, Y.371, A.372, M.373, S.506, F.509
- Ligands: CLA.18, CLA.26, CLA.33, CLA.35, BCR.47
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:L.358, A:L.362, A:Y.371, A:F.509, A:F.509
- pi-Cation interactions: A:H.369, A:H.369
- Metal complexes: A:H.369
CLA.28: 18 residues within 4Å:- Chain A: W.86, M.90, T.140, S.141, S.388, T.391, H.392, W.395, I.396, F.399, I.736, W.740, L.744
- Ligands: CLA.8, CLA.9, CLA.29, BCR.51, 45D.55
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:W.395, A:I.396, A:F.399, A:I.736, A:W.740, A:W.740, A:L.744
- pi-Stacking: A:W.740
- pi-Cation interactions: A:H.392
CLA.29: 18 residues within 4Å:- Chain A: L.87, S.141, G.142, L.146, L.359, T.363, V.366, M.370, Y.376, L.389, H.392, H.393, I.396, L.400
- Ligands: CLA.6, CLA.19, CLA.28, BCR.45
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:L.359, A:T.363, A:V.366, A:I.396, A:L.400
- Salt bridges: A:H.393
- pi-Stacking: A:H.392
- pi-Cation interactions: A:H.393, A:H.393
CLA.30: 24 residues within 4Å:- Chain A: H.52, A.53, A.55, H.56, D.57, L.352, L.356, F.399, L.400, G.403, H.407, I.410, R.414, R.571, W.588, L.595, L.733
- Ligands: CLA.4, CLA.5, CLA.6, CLA.8, CLA.40, LHG.48, 45D.55
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:H.56, A:D.57, A:L.352, A:L.356, A:L.356, A:L.595, A:L.733
- Hydrogen bonds: A:R.571
- Salt bridges: A:R.414, A:R.571
- pi-Stacking: A:H.407, A:H.407, A:H.407
CLA.31: 15 residues within 4Å:- Chain A: F.332, T.333, L.425, R.428, M.429, H.432, I.436, H.439
- Chain J: T.1, P.2, I.3
- Ligands: CLA.24, CLA.37, LHG.49, CLA.52
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:T.333, A:L.425, A:I.436, A:H.439
- Salt bridges: A:R.428, A:H.432
- pi-Cation interactions: A:H.432, A:H.432
CLA.32: 13 residues within 4Å:- Chain A: W.442, I.445, F.446, F.449, H.450
- Chain J: P.43, L.47
- Ligands: CLA.36, CLA.53, CLA.54, CLA.110, BCR.119, EQ3.120
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain J,- Hydrophobic interactions: A:W.442, J:P.43, J:L.47
- Salt bridges: A:H.450
- pi-Stacking: A:F.446, A:H.450
- Metal complexes: A:H.450
CLA.33: 12 residues within 4Å:- Chain A: W.485, V.486, L.489, H.490, A.493, T.497, A.498
- Ligands: CLA.18, CLA.27, CLA.34, CLA.35, BCR.47
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:W.485, A:V.486, A:L.489, A:T.497
- Hydrogen bonds: A:T.497
- pi-Cation interactions: A:H.490, A:H.490
CLA.34: 9 residues within 4Å:- Chain A: F.277, T.497, A.498, P.499, N.500
- Ligands: CLA.17, CLA.33, BCR.47, CLA.125
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:P.499
- Hydrogen bonds: A:N.500, A:N.500
- Metal complexes: A:T.497
CLA.35: 22 residues within 4Å:- Chain A: Q.368, Y.371, F.482, A.483, V.486, Q.487, H.490, F.509, I.525, L.527, H.535, H.538, I.542, V.605, H.608, F.609, K.612
- Ligands: CLA.26, CLA.27, CLA.33, CLA.36, CLA.37
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:F.482, A:A.483, A:I.525, A:L.527, A:H.538, A:I.542, A:V.605, A:F.609, A:K.612
- Hydrogen bonds: A:Q.487
- pi-Stacking: A:H.535
- pi-Cation interactions: A:H.608
CLA.36: 15 residues within 4Å:- Chain A: F.446, L.447, P.480, I.481, F.482, A.483, F.532, H.535, H.536, H.543
- Ligands: CLA.26, CLA.32, CLA.35, CLA.37, LHG.49
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:F.446, A:F.446, A:L.447, A:L.447, A:I.481, A:F.482, A:F.482
- Hydrogen bonds: A:F.482, A:A.483
- Salt bridges: A:H.535
- pi-Stacking: A:F.532, A:H.536
- pi-Cation interactions: A:H.536
CLA.37: 14 residues within 4Å:- Chain A: I.436, L.440, W.442, V.443, A.539, H.543
- Ligands: CLA.24, CLA.26, CLA.31, CLA.35, CLA.36, BCR.47, LHG.49, CLA.52
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:L.440, A:L.440, A:L.440, A:W.442, A:V.443
- Salt bridges: A:H.543
- pi-Stacking: A:H.543, A:H.543
CLA.38: 21 residues within 4Å:- Chain A: I.700, A.703, H.704, L.707, V.709
- Chain B: S.418, S.421, W.422, F.429
- Chain F: G.80, G.83, R.84, Y.86
- Ligands: CLA.39, PQN.42, CLA.50, CLA.87, CLA.88, CLA.114, BCR.116, C7Z.117
11 PLIP interactions:2 interactions with chain F, 8 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: F:Y.86, F:Y.86, A:I.700, A:I.700, A:L.707, A:V.709, B:F.429
- Salt bridges: A:H.704
- pi-Stacking: A:H.704, A:H.704
- Metal complexes: A:H.704
CLA.39: 22 residues within 4Å:- Chain A: T.45, I.48, W.49, I.700, V.701, H.704, V.709, P.711, P.715, R.716
- Chain F: Y.86, L.87, E.100, I.103, I.109, M.112
- Chain H: M.14, I.15, L.18
- Ligands: CLA.38, PQN.42, CLA.50
12 PLIP interactions:8 interactions with chain A, 3 interactions with chain H, 1 interactions with chain F,- Hydrophobic interactions: A:T.45, A:W.49, A:I.700, A:V.701, A:V.709, A:P.711, A:P.715, A:P.715, H:I.15, H:L.18, H:L.18, F:I.109
CLA.40: 20 residues within 4Å:- Chain A: W.49, F.677, F.681, L.718, Q.722, V.726, A.729, H.730, L.733
- Chain H: L.19, A.23
- Ligands: CLA.3, CLA.8, CLA.30, PQN.42, LHG.48, CLA.50, BCR.51, 45D.55, BCR.124
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: A:W.49, A:F.677, A:F.681, A:L.718, A:V.726, H:A.23
- Hydrogen bonds: A:Q.722
- pi-Stacking: A:H.730, A:H.730
- Metal complexes: A:H.730
CLA.41: 7 residues within 4Å:- Chain A: H.328, K.329, P.331, F.332
- Ligands: CLA.23, CLA.24, LHG.49
0 PLIP interactions:CLA.50: 16 residues within 4Å:- Chain A: I.48, W.49, H.52
- Chain F: V.101
- Chain H: F.7, A.11, P.12, I.15
- Ligands: CLA.4, CLA.11, CLA.38, CLA.39, CLA.40, PQN.42, LHG.48, BCR.124
5 PLIP interactions:2 interactions with chain A, 1 interactions with chain F, 2 interactions with chain H,- Hydrophobic interactions: A:W.49, F:V.101, H:F.7, H:P.12
- pi-Stacking: A:H.52
CLA.52: 16 residues within 4Å:- Chain A: A.435, H.439, W.442
- Chain B: A.678, R.681, T.682, P.683
- Chain J: T.1, I.3, S.4, I.13
- Ligands: CLA.31, CLA.37, CLA.54, EQ3.120, CLA.129
8 PLIP interactions:2 interactions with chain A, 3 interactions with chain B, 3 interactions with chain J,- Salt bridges: A:H.439
- pi-Stacking: A:H.439
- Hydrophobic interactions: B:R.681, B:T.682, B:P.683, J:I.3, J:I.3
- Hydrogen bonds: J:T.1
CLA.53: 23 residues within 4Å:- Chain A: F.449, G.453, L.454, I.456, H.457, T.460, M.461, R.466, D.469, F.471
- Chain J: F.39, L.40, P.43, W.44, L.47, G.48, P.49, L.50
- Ligands: CLA.32, CLA.65, CLA.66, BCR.119, EQ3.120
12 PLIP interactions:6 interactions with chain A, 6 interactions with chain J,- Hydrophobic interactions: A:L.454, A:H.457, A:T.460, J:F.39, J:L.40, J:P.43, J:P.43, J:L.47, J:P.49
- Hydrogen bonds: A:R.466, A:R.466
- pi-Cation interactions: A:H.457
CLA.54: 16 residues within 4Å:- Chain A: S.438, N.441, W.442, I.445
- Chain B: I.675, A.678, H.679, T.682, A.685, V.688
- Ligands: CLA.32, CLA.52, BCR.102, CLA.110, EQ3.120, CLA.129
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:I.675, B:I.675, B:T.682, B:A.685, B:V.688, A:I.445
- pi-Stacking: B:H.679
- Hydrogen bonds: A:N.441
CLA.57: 25 residues within 4Å:- Chain A: L.646, L.650, W.651
- Chain B: T.431, L.432, Y.435, V.516, A.519, W.586, F.589, L.613, W.616, L.621, S.625, I.629, F.647, H.651, W.654, Y.714, T.717, Y.718, F.721
- Ligands: CLA.1, CLA.2, CLA.58
24 PLIP interactions:21 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:T.431, B:L.432, B:Y.435, B:Y.435, B:V.516, B:A.519, B:W.586, B:W.586, B:F.589, B:W.616, B:W.616, B:L.621, B:I.629, B:F.647, B:W.654, B:W.654, B:F.721, A:L.650, A:L.650, A:W.651
- pi-Stacking: B:F.647, B:H.651, B:H.651
- pi-Cation interactions: B:H.651
CLA.58: 22 residues within 4Å:- Chain A: F.452, I.456, F.540, F.596, W.597, N.600, I.642, L.646, Y.731
- Chain B: W.645, L.648, F.649, H.651, L.652, W.654, A.655
- Ligands: CLA.1, CLA.57, CLA.59, CLA.65, CLA.66, BCR.102
16 PLIP interactions:7 interactions with chain A, 9 interactions with chain B,- Hydrophobic interactions: A:F.452, A:I.456, A:F.540, A:F.540, A:W.597, A:I.642, A:Y.731, B:L.648, B:F.649, B:F.649, B:H.651, B:L.652, B:L.652, B:W.654, B:A.655
- Salt bridges: B:H.651
CLA.59: 22 residues within 4Å:- Chain A: N.441, C.444, I.445, G.448, F.449, F.452, F.540, L.547, I.548, F.596, W.597
- Chain B: L.652, A.655, T.656, F.658, M.659, Y.667, W.668, L.671
- Ligands: CLA.58, CLA.95, BCR.102
13 PLIP interactions:6 interactions with chain B, 7 interactions with chain A,- Hydrophobic interactions: B:L.652, B:A.655, B:F.658, B:M.659, B:Y.667, B:W.668, A:I.445, A:F.449, A:F.452, A:I.548, A:F.596
- pi-Stacking: A:W.597, A:W.597
CLA.60: 16 residues within 4Å:- Chain B: F.8, G.24, I.25, A.28, H.29, F.31, S.49, H.53, I.56
- Chain K: S.26, L.29, Y.30
- Ligands: CLA.61, CLA.62, LMG.104, ECH.130
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain K,- Hydrophobic interactions: B:I.25, B:A.28, B:F.31, B:I.56, K:L.29
- pi-Stacking: B:H.29, B:H.29
- Metal complexes: B:H.29
CLA.61: 25 residues within 4Å:- Chain B: H.29, F.31, I.46, S.49, H.50, H.53, I.54, I.57, F.168, R.174, H.178, L.182, L.328, H.329, Q.331, L.332, A.335, L.336, L.339
- Ligands: CLA.60, CLA.62, CLA.69, CLA.80, CLA.85, BCR.99
18 PLIP interactions:18 interactions with chain B,- Hydrophobic interactions: B:H.29, B:F.31, B:F.31, B:I.46, B:I.46, B:I.46, B:F.168, B:L.182, B:L.328, B:L.328, B:L.328, B:Q.331, B:L.332, B:L.332, B:L.339
- Salt bridges: B:H.53
- pi-Stacking: B:H.53
- pi-Cation interactions: B:H.50
CLA.62: 12 residues within 4Å:- Chain B: H.29, H.53, I.57, W.60, L.339
- Ligands: CLA.60, CLA.61, CLA.83, CLA.84, CLA.85, BCR.99, LMG.104
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:I.57, B:I.57, B:W.60, B:W.60, B:L.339
- Salt bridges: B:H.29
- pi-Stacking: B:H.53
- Metal complexes: B:H.53
CLA.63: 23 residues within 4Å:- Chain B: L.59, W.60, S.62, G.63, F.66, H.67, W.70, Q.71, A.90, W.92, L.143
- Chain G: Y.5, L.10, P.11, L.14, I.15, V.18
- Chain K: I.8, A.11, A.15
- Ligands: CLA.64, CLA.65, BCR.119
16 PLIP interactions:9 interactions with chain B, 3 interactions with chain K, 4 interactions with chain G,- Hydrophobic interactions: B:F.66, B:F.66, B:W.70, B:W.70, B:L.143, K:I.8, K:A.11, K:A.15, G:L.10, G:L.14, G:L.14, G:I.15
- Hydrogen bonds: B:Q.71
- Salt bridges: B:H.67
- pi-Stacking: B:H.67, B:H.67
CLA.64: 14 residues within 4Å:- Chain B: A.88, H.89, I.115, A.116, Y.117, S.118, V.642, W.643, M.646
- Ligands: CLA.63, CLA.65, CLA.83, BCR.102, BCR.119
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:A.88, B:Y.117, B:V.642, B:W.643, B:W.643
- Hydrogen bonds: B:Y.117, B:S.118, B:S.118
- pi-Stacking: B:H.89
- Metal complexes: B:H.89
CLA.65: 20 residues within 4Å:- Chain A: T.460, A.463, L.464
- Chain B: H.89, I.91, W.92, D.93, H.95, F.96, N.114, V.642
- Chain G: I.15, V.18
- Ligands: CLA.53, CLA.58, CLA.63, CLA.64, CLA.66, BCR.102, BCR.119
12 PLIP interactions:3 interactions with chain A, 7 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: A:T.460, A:A.463, A:L.464, B:I.91, B:I.91, B:D.93, B:V.642, B:V.642, G:I.15, G:I.15
- Hydrogen bonds: B:W.92
- pi-Stacking: B:H.95
CLA.66: 11 residues within 4Å:- Chain B: H.95
- Chain G: G.19, W.20
- Chain J: W.44, P.49, I.62
- Ligands: CLA.53, CLA.58, CLA.65, BCR.119, EQ3.120
3 PLIP interactions:1 interactions with chain G, 1 interactions with chain J, 1 interactions with chain B,- Hydrophobic interactions: G:W.20, J:I.62
- pi-Stacking: B:H.95
CLA.67: 14 residues within 4Å:- Chain B: F.47, F.51, L.148, F.149, F.151, A.152, L.155, H.156, K.160, F.161, W.167
- Ligands: CLA.68, CLA.69, SQD.108
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:F.47, B:F.149, B:F.151, B:A.152, B:L.155
- pi-Stacking: B:H.156, B:H.156
- Metal complexes: B:H.156
CLA.68: 10 residues within 4Å:- Chain B: W.167, S.173, H.177, N.294, W.295
- Ligands: CLA.67, CLA.69, CLA.76, BCR.99, SQD.108
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:W.295
- pi-Stacking: B:H.177, B:H.177
- Metal complexes: B:H.177
CLA.69: 14 residues within 4Å:- Chain B: F.47, H.50, F.51, I.54, W.167, R.174, H.177, H.178, G.181, L.182
- Ligands: CLA.61, CLA.67, CLA.68, BCR.99
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:F.47, B:W.167, B:R.174, B:R.174, B:H.177, B:L.182, B:L.182, B:L.182
- Salt bridges: B:H.50
- pi-Stacking: B:H.178, B:H.178
- Metal complexes: B:H.178
CLA.70: 17 residues within 4Å:- Chain B: I.127, M.129, E.134, S.137, G.138, F.141, S.186, A.189, W.190, H.193, H.196, V.197, G.208, W.209, F.212
- Ligands: CLA.71, ECH.100
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:F.141, B:W.190, B:W.190, B:W.190, B:H.193, B:V.197, B:W.209, B:W.209, B:W.209, B:F.212
- Hydrogen bonds: B:W.209
- pi-Stacking: B:H.193, B:H.193, B:W.209, B:W.209
CLA.71: 16 residues within 4Å:- Chain B: L.188, A.189, G.192, V.195, H.196, L.213, S.214, T.215, P.216, P.217, G.221, L.222, L.255
- Ligands: CLA.70, BCR.98, ECH.100
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.188, B:L.188, B:V.195, B:L.213, B:L.222, B:L.222, B:L.222, B:L.255
- pi-Stacking: B:H.196
CLA.72: 12 residues within 4Å:- Chain B: W.230, Y.233, L.255, T.256, F.257, H.275, L.278, A.279, A.489, W.490
- Ligands: CLA.73, BCR.98
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:W.230, B:W.230, B:W.230, B:Y.233, B:L.278, B:L.278, B:A.279, B:W.490
- pi-Stacking: B:H.275, B:H.275
- Metal complexes: B:H.275
CLA.73: 16 residues within 4Å:- Chain B: T.256, F.257, L.268, D.272, I.273, H.275, H.276, I.283, H.349, L.353, W.494
- Ligands: CLA.72, CLA.74, CLA.82, CLA.90, CLA.91
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:F.257, B:F.257, B:F.257, B:L.268, B:D.272, B:I.273, B:H.275, B:I.283, B:W.494
- Hydrogen bonds: B:H.349
CLA.74: 17 residues within 4Å:- Chain B: W.123, F.183, S.186, S.187, W.190, L.194, I.273, H.276, H.277, I.280, F.284, V.346, M.350, S.355, Y.356
- Ligands: CLA.73, CLA.84
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:W.190, B:W.190, B:I.280, B:F.284, B:V.346
- Salt bridges: B:H.277
- pi-Stacking: B:W.190, B:H.276, B:H.277
- Metal complexes: B:H.277
CLA.75: 15 residues within 4Å:- Chain B: L.179, I.283, F.284, A.287, M.290, Y.291, I.301, I.304
- Ligands: CLA.77, CLA.78, CLA.79, CLA.80, CLA.82, LHG.105, LMG.106
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.179, B:I.283, B:F.284, B:F.284, B:A.287
- Hydrogen bonds: B:Y.291
CLA.76: 11 residues within 4Å:- Chain B: N.176, H.177, A.180, V.185, G.288, H.289, T.293, W.295, I.297
- Ligands: CLA.68, BCR.98
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:N.176, B:V.185, B:W.295, B:W.295
- Hydrogen bonds: B:N.176
- Metal complexes: B:H.289
CLA.77: 9 residues within 4Å:- Chain B: I.286, H.289, M.290, I.297, G.298, H.299
- Ligands: CLA.75, CLA.78, BCR.98
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:I.286, B:M.290, B:I.297
- Hydrogen bonds: B:G.298
- Salt bridges: B:H.299
- pi-Cation interactions: B:H.299, B:H.299
- Metal complexes: B:H.299
CLA.78: 10 residues within 4Å:- Chain B: M.290, H.299, I.304, A.307, H.308
- Ligands: CLA.75, CLA.77, CLA.79, CLA.96, BCR.103
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:I.304
- Salt bridges: B:H.308
- pi-Stacking: B:H.308
- Metal complexes: B:H.308
CLA.79: 14 residues within 4Å:- Chain B: I.304, L.305, H.308, H.317, I.324, V.405, M.409
- Ligands: CLA.75, CLA.78, CLA.80, CLA.86, CLA.96, BCR.103, LHG.105
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.305, B:I.324, B:V.405, B:V.405
- Salt bridges: B:H.308
- pi-Stacking: B:H.317
- Metal complexes: B:H.317
CLA.80: 15 residues within 4Å:- Chain B: A.171, R.174, L.175, H.178, L.305, Y.321, I.324, N.325, L.334, A.335, S.338, I.342
- Ligands: CLA.61, CLA.75, CLA.79
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:L.175, B:L.305, B:Y.321, B:I.324, B:I.324, B:N.325, B:L.334, B:A.335, B:I.342
- Hydrogen bonds: B:R.174
- Salt bridges: B:H.178
CLA.81: 24 residues within 4Å:- Chain B: V.341, S.344, L.345, Q.348, Q.374, G.378, M.381, V.382, F.385, L.524, T.527, A.528, L.531, I.532, M.580, L.584, L.587
- Ligands: CLA.82, CLA.90, CLA.92, CLA.93, CLA.94, BCR.101, LHG.105
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:V.382, B:F.385, B:F.385, B:L.524, B:T.527, B:A.528, B:L.531, B:I.532, B:M.580, B:L.584, B:L.587
- Hydrogen bonds: B:Q.374
CLA.82: 15 residues within 4Å:- Chain B: V.341, L.345, Q.348, H.349, Y.351, S.352, L.353, L.505, F.506
- Ligands: CLA.73, CLA.75, CLA.81, CLA.90, CLA.92, BCR.101
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:V.341, B:Y.351, B:L.353, B:L.505, B:F.506
- Metal complexes: B:H.349
CLA.83: 18 residues within 4Å:- Chain B: W.60, Y.117, S.118, A.368, T.371, H.372, Y.375, I.376, F.379, M.646, V.715, Y.718, A.719, L.722
- Ligands: CLA.62, CLA.64, CLA.84, LMG.104
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:A.368, B:T.371, B:Y.375, B:Y.375, B:I.376, B:F.379, B:V.715, B:Y.718, B:A.719, B:L.722
- pi-Stacking: B:H.372, B:H.372
CLA.84: 19 residues within 4Å:- Chain B: W.60, T.61, G.119, L.339, I.342, T.343, V.346, M.350, Y.356, L.369, H.372, H.373, I.376, L.380
- Ligands: CLA.62, CLA.74, CLA.83, BCR.99, ECH.100
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.60, B:T.61, B:L.339, B:L.339, B:I.342, B:T.343, B:V.346, B:I.376, B:L.380
- Hydrogen bonds: B:Y.356
- Salt bridges: B:H.373
- pi-Stacking: B:H.372, B:H.372, B:H.373
- Metal complexes: B:H.373
CLA.85: 20 residues within 4Å:- Chain B: A.26, A.28, H.29, D.30, H.329, L.332, L.336, F.379, V.382, G.383, A.386, H.387, I.390, R.394, Y.552, W.570, F.573
- Ligands: CLA.61, CLA.62, LMG.104
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:D.30, B:L.332, B:L.332, B:L.336, B:A.386, B:F.573, B:F.573
- Hydrogen bonds: B:H.29, B:D.30
- Salt bridges: B:H.29, B:R.394
- pi-Stacking: B:H.387, B:H.387
CLA.86: 13 residues within 4Å:- Chain B: L.312, T.313, R.408, M.409, H.412, L.416, H.419
- Ligands: CLA.79, CLA.87, CLA.94, BCR.103, LHG.105, SQD.113
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:T.313, B:L.416
- Salt bridges: B:R.408, B:H.412
- pi-Cation interactions: B:H.412
CLA.87: 15 residues within 4Å:- Chain A: W.702, K.706, L.707
- Chain B: A.415, H.419, W.422
- Chain F: Y.126, V.132, D.135
- Ligands: CLA.38, CLA.86, CLA.88, CLA.94, SQD.113, C7Z.117
8 PLIP interactions:4 interactions with chain B, 1 interactions with chain F, 3 interactions with chain A,- Hydrophobic interactions: B:W.422, F:V.132, A:K.706, A:L.707, A:L.707
- Salt bridges: B:H.419
- pi-Stacking: B:H.419
- Metal complexes: B:H.419
CLA.88: 19 residues within 4Å:- Chain B: W.422, L.425, F.426, F.429, H.430
- Chain F: F.65, S.69, F.72, A.76, I.79, G.80
- Ligands: CLA.38, 45D.55, CLA.87, CLA.89, CLA.93, BCR.116, C7Z.117, C7Z.121
10 PLIP interactions:4 interactions with chain F, 6 interactions with chain B,- Hydrophobic interactions: F:F.65, F:F.72, F:A.76, B:F.426, B:F.426, B:F.429
- pi-Stacking: F:F.72, B:H.430
- Salt bridges: B:H.430
- Metal complexes: B:H.430
CLA.89: 20 residues within 4Å:- Chain A: V.121
- Chain B: G.433, L.434, V.436, H.437, V.440, K.449, I.451
- Chain F: Y.40
- Chain H: F.29, N.30, D.35, L.36, L.37
- Ligands: CLA.9, BCR.51, 45D.55, CLA.88, BCR.116, C7Z.121
12 PLIP interactions:4 interactions with chain H, 1 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: H:F.29, A:V.121, B:L.434, B:V.440, B:V.440, B:I.451
- Hydrogen bonds: H:N.30, H:D.35, H:D.35
- Salt bridges: B:K.449
- pi-Stacking: B:H.437
- pi-Cation interactions: B:H.437
CLA.90: 14 residues within 4Å:- Chain B: W.460, I.461, T.464, S.465, L.475, L.476, W.490, W.494
- Ligands: CLA.73, CLA.81, CLA.82, CLA.91, CLA.92, BCR.101
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:W.460, B:W.460, B:I.461
CLA.91: 11 residues within 4Å:- Chain B: L.475, I.482, A.483, T.486, A.488, W.490
- Ligands: CLA.73, CLA.90, BCR.101, LMG.106, LHG.107
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:L.475, B:I.482, B:T.486
- Hydrogen bonds: B:T.486
CLA.92: 23 residues within 4Å:- Chain B: Q.348, Y.351, Y.370, F.457, A.458, I.461, Q.462, F.506, L.507, I.509, H.517, I.520, L.524, L.587, Y.590, W.591
- Ligands: CLA.81, CLA.82, CLA.90, CLA.93, CLA.94, LHG.105, CLA.115
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:Y.351, B:I.509, B:I.520, B:L.524, B:L.587, B:Y.590, B:Y.590
- Hydrogen bonds: B:Q.462
- Metal complexes: B:H.517
CLA.93: 21 residues within 4Å:- Chain B: V.423, F.426, L.427, E.454, P.455, V.456, F.457, A.458, F.514, H.517, H.518, H.525
- Chain F: V.55, F.65, S.69, L.73
- Ligands: CLA.81, CLA.88, CLA.92, CLA.94, C7Z.117
20 PLIP interactions:16 interactions with chain B, 4 interactions with chain F,- Hydrophobic interactions: B:V.423, B:F.426, B:F.426, B:F.426, B:L.427, B:F.457, B:F.457, B:A.458, B:F.514, F:V.55, F:F.65, F:F.65, F:L.73
- Hydrogen bonds: B:F.457, B:A.458
- Salt bridges: B:H.517
- pi-Stacking: B:F.514
- pi-Cation interactions: B:H.518, B:H.518
- Metal complexes: B:H.518
CLA.94: 16 residues within 4Å:- Chain B: L.416, H.419, L.420, W.422, V.423, A.521, L.524, H.525, I.532
- Ligands: CLA.81, CLA.86, CLA.87, CLA.92, CLA.93, BCR.101, LHG.105
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:H.419, B:L.420, B:L.420, B:L.420, B:W.422, B:V.423, B:I.532
- Salt bridges: B:H.525
- pi-Cation interactions: B:H.525
- Metal complexes: B:H.525
CLA.95: 15 residues within 4Å:- Chain B: W.22, F.649, L.652, V.653, T.656, M.659, F.660, L.697, V.705, H.709
- Ligands: CLA.59, PQN.97, BCR.102, LMG.104, BCR.119
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.649, B:L.652, B:V.653, B:T.656, B:L.697
- Salt bridges: B:H.709
- pi-Stacking: B:H.709
CLA.96: 7 residues within 4Å:- Chain B: H.308, K.309, G.310, P.311
- Ligands: CLA.78, CLA.79, LHG.105
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:P.311
- Hydrogen bonds: B:K.309
CLA.110: 20 residues within 4Å:- Chain B: T.18, I.21, I.675, V.676, H.679, V.688, R.689, W.690, K.691, D.692, P.694
- Chain G: F.31, I.34
- Chain J: A.74, Y.78, V.81, T.82
- Ligands: CLA.32, CLA.54, PQN.97
12 PLIP interactions:7 interactions with chain B, 2 interactions with chain J, 3 interactions with chain G,- Hydrophobic interactions: B:T.18, B:I.21, B:I.675, B:V.676, B:W.690, B:P.694, J:Y.78, G:F.31, G:F.31, G:I.34
- Hydrogen bonds: B:K.691, J:T.82
CLA.114: 11 residues within 4Å:- Chain F: I.75, W.78, I.79, V.82, M.112
- Chain H: L.18, T.22, L.26
- Ligands: CLA.38, BCR.51, BCR.116
6 PLIP interactions:4 interactions with chain F, 2 interactions with chain H,- Hydrophobic interactions: F:W.78, F:I.79, F:I.79, F:V.82, H:L.18, H:T.22
CLA.115: 10 residues within 4Å:- Chain B: V.456, F.457, W.460, F.472
- Chain F: D.56, G.57, R.58, F.59
- Ligands: CLA.92, C7Z.117
8 PLIP interactions:4 interactions with chain F, 4 interactions with chain B,- Hydrophobic interactions: F:R.58, F:F.59, F:F.59, B:V.456, B:F.457, B:W.460, B:F.472
- Hydrogen bonds: F:F.59
CLA.122: 7 residues within 4Å:- Chain F: I.67, I.70, L.71
- Chain H: F.29, H.39, P.40
- Ligands: C7Z.121
6 PLIP interactions:3 interactions with chain H, 3 interactions with chain F,- Hydrophobic interactions: H:F.29, F:I.67, F:I.67, F:I.70
- pi-Stacking: H:H.39
- pi-Cation interactions: H:H.39
CLA.123: 9 residues within 4Å:- Chain A: W.118
- Chain H: F.21, G.24, I.25, E.28, R.31, F.32
- Ligands: CLA.7, BCR.124
7 PLIP interactions:7 interactions with chain H,- Hydrophobic interactions: H:F.21, H:I.25, H:E.28, H:F.32, H:F.32
- pi-Cation interactions: H:R.31
- Metal complexes: H:E.28
CLA.125: 7 residues within 4Å:- Chain A: N.500
- Chain I: I.58, L.59, G.62, M.63
- Ligands: CLA.17, CLA.34
2 PLIP interactions:2 interactions with chain I,- Hydrophobic interactions: I:I.58, I:L.59
CLA.126: 12 residues within 4Å:- Chain A: F.263, F.264, L.266
- Chain I: W.1, V.5, M.9, C.10, N.13, K.41, H.57
- Ligands: CLA.20, BCR.127
7 PLIP interactions:4 interactions with chain I, 3 interactions with chain A,- Hydrophobic interactions: I:V.5, I:K.41, A:F.263, A:F.264, A:L.266
- pi-Stacking: I:H.57, I:H.57
CLA.129: 17 residues within 4Å:- Chain B: L.684, L.687, V.688
- Chain J: F.12, L.16, E.31, V.32, A.35, H.36, F.39, A.71, L.75, W.99, F.102
- Ligands: CLA.52, CLA.54, EQ3.120
17 PLIP interactions:13 interactions with chain J, 4 interactions with chain B,- Hydrophobic interactions: J:F.12, J:V.32, J:V.32, J:A.35, J:F.39, J:F.39, J:A.71, J:L.75, J:W.99, J:F.102, J:F.102, B:L.684, B:L.684, B:L.687, B:V.688
- pi-Cation interactions: J:H.36, J:H.36
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.42: 17 residues within 4Å:- Chain A: W.49, M.684, F.685, S.688, G.689, R.690, W.693, A.717, L.718, G.723
- Chain H: L.19
- Ligands: CLA.3, CLA.38, CLA.39, CLA.40, CLA.50, BCR.116
12 PLIP interactions:11 interactions with chain A, 1 interactions with chain H- Hydrophobic interactions: A:W.49, A:W.49, A:F.685, A:F.685, A:R.690, A:W.693, A:L.718, A:L.718, H:L.19
- Hydrogen bonds: A:S.688, A:L.718
- pi-Stacking: A:W.693
PQN.97: 14 residues within 4Å:- Chain B: M.659, F.660, S.663, W.664, R.665, W.668, I.672, A.696, L.697, A.702
- Ligands: CLA.95, BCR.102, LMG.104, CLA.110
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:R.665, B:W.668, B:W.668, B:I.672, B:L.697, B:L.697, B:A.702
- Hydrogen bonds: B:L.697
- pi-Stacking: B:W.668
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.43: 11 residues within 4Å:- Chain A: C.574, G.576, P.577, C.583, I.720, R.724
- Chain B: C.556, G.558, P.559, C.565, W.664
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A,- Metal complexes: B:C.556, B:C.565, A:C.574, A:C.583
SF4.111: 13 residues within 4Å:- Chain C: C.20, P.21, L.22, V.24, L.25, C.47, V.48, G.49, C.50, K.51, R.52, C.53, V.66
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.20, C:C.47, C:C.50, C:C.53
SF4.112: 14 residues within 4Å:- Chain C: C.10, I.11, G.12, C.13, T.14, C.16, M.27, A.39, A.56, C.57, P.58, T.59, S.63, I.64
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.10, C:C.13, C:C.16, C:C.57
- 14 x BCR: BETA-CAROTENE(Non-covalent)
BCR.44: 15 residues within 4Å:- Chain A: L.210, F.263, F.264, L.298, I.305, H.309
- Chain I: I.24, A.51, S.54, F.55
- Ligands: CLA.15, CLA.17, CLA.20, CLA.22, BCR.127
12 PLIP interactions:5 interactions with chain I, 7 interactions with chain A- Hydrophobic interactions: I:I.24, I:A.51, I:F.55, I:F.55, I:F.55, A:L.210, A:F.263, A:F.264, A:L.298, A:I.305, A:I.305, A:H.309
BCR.45: 8 residues within 4Å:- Chain A: V.83, F.84
- Ligands: CLA.5, CLA.6, CLA.13, CLA.14, CLA.16, CLA.29
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.83, A:F.84
BCR.46: 10 residues within 4Å:- Chain A: I.343, L.344, A.350, A.353, I.354, F.411
- Ligands: CLA.24, CLA.25, BCR.47, LHG.49
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:I.343, A:L.344, A:A.350, A:A.353, A:I.354, A:F.411, A:F.411
BCR.47: 12 residues within 4Å:- Chain A: A.357, S.361, I.401, G.405, L.549
- Ligands: CLA.24, CLA.26, CLA.27, CLA.33, CLA.34, CLA.37, BCR.46
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:A.357, A:I.401, A:L.549
BCR.51: 17 residues within 4Å:- Chain A: V.82, V.85, W.86
- Chain H: A.23, L.26
- Ligands: CLA.4, CLA.6, CLA.7, CLA.8, CLA.9, CLA.28, CLA.40, 45D.55, CLA.89, CLA.114, BCR.116, BCR.124
5 PLIP interactions:3 interactions with chain H, 2 interactions with chain A- Hydrophobic interactions: H:A.23, H:L.26, H:L.26, A:V.82, A:V.85
BCR.98: 10 residues within 4Å:- Chain B: L.188, F.225, L.278, I.285, I.286, H.289
- Ligands: CLA.71, CLA.72, CLA.76, CLA.77
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:L.188, B:F.225, B:L.278, B:I.285, B:I.286
BCR.99: 12 residues within 4Å:- Chain B: I.57, F.58, F.149, G.181, L.182, V.185, S.186
- Ligands: CLA.61, CLA.62, CLA.68, CLA.69, CLA.84
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:I.57, B:F.58, B:F.149, B:L.182, B:V.185
BCR.101: 16 residues within 4Å:- Chain B: F.330, L.334, A.337, V.341, M.381, F.385, G.388, F.391, F.392
- Ligands: CLA.81, CLA.82, CLA.90, CLA.91, CLA.94, BCR.103, LHG.105
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:F.330, B:F.330, B:L.334, B:A.337, B:V.341, B:F.385, B:F.391, B:F.392
BCR.102: 13 residues within 4Å:- Chain A: I.445
- Chain B: V.642, W.645, M.646, F.649, W.668
- Ligands: CLA.54, CLA.58, CLA.59, CLA.64, CLA.65, CLA.95, PQN.97
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:V.642, B:W.645, B:F.649, B:F.649, B:W.668, A:I.445
BCR.103: 8 residues within 4Å:- Chain B: M.409, I.532
- Ligands: CLA.78, CLA.79, CLA.86, BCR.101, LHG.105, LMG.106
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.532
BCR.116: 14 residues within 4Å:- Chain B: F.429
- Chain F: P.68, L.71, F.72, I.75
- Chain H: L.26
- Ligands: CLA.3, CLA.38, PQN.42, BCR.51, 45D.55, CLA.88, CLA.89, CLA.114
5 PLIP interactions:1 interactions with chain H, 4 interactions with chain F- Hydrophobic interactions: H:L.26, F:L.71, F:F.72, F:F.72, F:I.75
BCR.119: 11 residues within 4Å:- Chain G: V.18, G.19, P.23
- Ligands: CLA.32, CLA.53, CLA.63, CLA.64, CLA.65, CLA.66, CLA.95, EQ3.120
2 PLIP interactions:2 interactions with chain G- Hydrophobic interactions: G:V.18, G:P.23
BCR.124: 15 residues within 4Å:- Chain A: W.118
- Chain H: P.12, V.13, M.16, T.20, I.27, E.28, R.31
- Ligands: CLA.4, CLA.7, CLA.9, CLA.40, CLA.50, BCR.51, CLA.123
7 PLIP interactions:2 interactions with chain A, 5 interactions with chain H- Hydrophobic interactions: A:W.118, A:W.118, H:V.13, H:T.20, H:I.27, H:I.27, H:E.28
BCR.127: 14 residues within 4Å:- Chain A: F.263, W.268, V.302
- Chain I: P.36, L.38, L.50, M.53, S.54, H.57, I.58
- Ligands: CLA.17, CLA.20, BCR.44, CLA.126
11 PLIP interactions:4 interactions with chain A, 7 interactions with chain I- Hydrophobic interactions: A:F.263, A:F.263, A:W.268, A:V.302, I:P.36, I:P.36, I:L.38, I:L.38, I:L.50, I:M.53, I:H.57
- 4 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
LHG.48: 23 residues within 4Å:- Chain A: W.49, N.50, H.52, A.53, N.54, R.571, W.588, L.595, S.719, I.721, Q.722, A.725, A.729, L.732, L.733, I.736
- Chain E: G.50
- Ligands: CLA.4, CLA.6, CLA.8, CLA.30, CLA.40, CLA.50
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:W.49, A:W.49, A:H.52, A:L.595, A:Q.722, A:L.733, A:I.736
- Hydrogen bonds: A:N.50, A:N.54, A:S.719
- Salt bridges: A:R.571, A:R.571
LHG.49: 15 residues within 4Å:- Chain A: H.328, K.329, G.330, F.332, T.333, G.336, H.337, L.425
- Ligands: CLA.24, CLA.26, CLA.31, CLA.36, CLA.37, CLA.41, BCR.46
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.330, A:F.332, A:T.333, A:T.333
LHG.105: 18 residues within 4Å:- Chain B: H.308, K.309, G.310, P.311, L.312, T.313, G.316, H.317, V.405
- Ligands: CLA.75, CLA.79, CLA.81, CLA.86, CLA.92, CLA.94, CLA.96, BCR.101, BCR.103
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:L.312, B:T.313
LHG.107: 6 residues within 4Å:- Chain B: D.480, S.481, I.482, A.483
- Ligands: CLA.91, LMG.106
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:A.483
- 1 x 45D: beta,beta-carotene-4,4'-dione(Non-covalent)
45D.55: 20 residues within 4Å:- Chain A: M.671, A.674, F.677, V.678, I.736, V.737, W.740
- Chain B: L.432, G.433, V.436
- Ligands: CLA.2, CLA.3, CLA.8, CLA.28, CLA.30, CLA.40, BCR.51, CLA.88, CLA.89, BCR.116
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:A.674, A:F.677, A:F.677, A:V.678, A:I.736, A:V.737, A:V.737, A:W.740, B:L.432, B:L.432
- 1 x CL: CHLORIDE ION(Non-functional Binders)
CL.56: 6 residues within 4Å:- Chain A: R.462, T.641, N.643, G.644, R.647
- Chain B: Y.632
Ligand excluded by PLIP- 2 x ECH: beta,beta-caroten-4-one(Non-covalent)
ECH.100: 12 residues within 4Å:- Chain B: T.61, L.65, W.123, F.124, M.129, G.138, F.141, L.142, L.213
- Ligands: CLA.70, CLA.71, CLA.84
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:T.61, B:L.65, B:W.123, B:F.124, B:F.141, B:L.142, B:L.213
ECH.130: 10 residues within 4Å:- Chain B: I.56, L.150
- Chain K: L.12, A.15, L.16, A.19, F.20, A.22, S.26
- Ligands: CLA.60
8 PLIP interactions:6 interactions with chain K, 2 interactions with chain B- Hydrophobic interactions: K:L.12, K:L.16, K:L.16, K:A.19, K:F.20, K:A.22, B:I.56, B:L.150
- 2 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.104: 21 residues within 4Å:- Chain B: L.12, W.22, Y.23, A.26, S.553, W.570, F.573, M.577, S.698, V.700, Q.701, L.704, A.708, T.711, V.712
- Ligands: CLA.60, CLA.62, CLA.83, CLA.85, CLA.95, PQN.97
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:W.22, B:W.22, B:A.26, B:F.573, B:L.704, B:L.704, B:A.708, B:T.711, B:V.712
- Hydrogen bonds: B:S.553, B:S.553, B:S.698
LMG.106: 6 residues within 4Å:- Chain B: I.286, I.482
- Ligands: CLA.75, CLA.91, BCR.103, LHG.107
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.286
- 2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.108: 9 residues within 4Å:- Chain B: L.148, F.151, W.154, L.155, Q.158, K.160, F.161
- Ligands: CLA.67, CLA.68
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:L.148
- Hydrogen bonds: B:K.160
SQD.113: 12 residues within 4Å:- Chain A: K.706
- Chain B: Y.396, D.403, A.407, E.411
- Chain F: Y.126, V.132, M.133, K.134, D.135
- Ligands: CLA.86, CLA.87
4 PLIP interactions:2 interactions with chain F, 1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: F:M.133
- Salt bridges: F:K.134, A:K.706
- Hydrophobic interactions: B:E.411
- 2 x CA: CALCIUM ION(Non-covalent)
CA.109: 5 residues within 4Å:- Chain B: G.128, E.134, E.201, H.206, V.207
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:E.134, B:E.201
CA.128: 3 residues within 4Å:- Chain A: D.469
- Chain J: P.49, D.52
2 PLIP interactions:2 interactions with chain J- Metal complexes: J:P.49, J:D.52
- 2 x C7Z: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol(Non-covalent)
C7Z.117: 16 residues within 4Å:- Chain A: L.707
- Chain B: F.457
- Chain F: V.55, G.57, F.65, A.76, G.77, G.80, W.81, R.84, A.122
- Ligands: CLA.38, CLA.87, CLA.88, CLA.93, CLA.115
6 PLIP interactions:5 interactions with chain F, 1 interactions with chain B- Hydrophobic interactions: F:W.81, F:W.81, F:A.122, B:F.457
- Hydrogen bonds: F:V.55, F:A.76
C7Z.121: 19 residues within 4Å:- Chain B: F.426, L.427, H.430, L.434, I.451, I.453, F.514, H.518
- Chain F: D.64, P.68
- Chain H: Y.33, L.36, L.37, F.38, H.39, P.40
- Ligands: CLA.88, CLA.89, CLA.122
14 PLIP interactions:6 interactions with chain H, 6 interactions with chain B, 2 interactions with chain F- Hydrophobic interactions: H:Y.33, H:L.36, H:L.36, H:L.36, H:H.39, H:P.40, B:H.430, B:L.434, B:I.451, B:I.453, B:F.514, F:P.68, F:P.68
- Hydrogen bonds: B:F.426
- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.118: 13 residues within 4Å:- Chain F: V.102, I.103, N.104, V.105, P.106
- Chain H: D.2, K.5, S.6, L.8, S.9, V.13, M.14
- Ligands: CLA.7
9 PLIP interactions:6 interactions with chain H, 3 interactions with chain F- Hydrophobic interactions: H:L.8, H:V.13, F:V.105
- Hydrogen bonds: H:D.2, H:D.2, H:S.6, H:S.9, F:I.103, F:V.105
- 1 x EQ3: (3'R)-3'-hydroxy-beta,beta-caroten-4-one(Non-covalent)
EQ3.120: 14 residues within 4Å:- Chain B: T.682, P.683, L.684
- Chain G: W.20
- Chain J: G.63, A.66, L.67
- Ligands: CLA.32, CLA.52, CLA.53, CLA.54, CLA.66, BCR.119, CLA.129
5 PLIP interactions:1 interactions with chain B, 3 interactions with chain J, 1 interactions with chain G- Hydrophobic interactions: B:T.682, J:A.66, J:L.67, J:L.67, G:W.20
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Netzer-El, S.Y. et al., Crystal Structure of Photosystem I Monomer From Synechocystis PCC 6803. Front Plant Sci (2018)
- Release Date
- 2019-01-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit PsaK 2: I
Photosystem I reaction center subunit XI: J
Photosystem I reaction center subunit XII: K - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
IH
JI
KJ
LK
M - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 4.00 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 93 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 14 x BCR: BETA-CAROTENE(Non-covalent)
- 4 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
- 1 x 45D: beta,beta-carotene-4,4'-dione(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x ECH: beta,beta-caroten-4-one(Non-covalent)
- 2 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x C7Z: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol(Non-covalent)
- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 1 x EQ3: (3'R)-3'-hydroxy-beta,beta-caroten-4-one(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Netzer-El, S.Y. et al., Crystal Structure of Photosystem I Monomer From Synechocystis PCC 6803. Front Plant Sci (2018)
- Release Date
- 2019-01-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit PsaK 2: I
Photosystem I reaction center subunit XI: J
Photosystem I reaction center subunit XII: K - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
IH
JI
KJ
LK
M - Membrane
-
We predict this structure to be a membrane protein.