SMTL ID : 6iez.1

Crystal structure of CERT START domain in complex with compound B16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x A50: 2-({4'-pentyl-3'-[2-(pyridin-2-yl)ethyl][1,1'-biphenyl]-4-yl}sulfonyl)ethan-1-ol(Non-covalent)

A50.1: 18 residues within 4Å: Chain A: F.75, E.85, T.87, Q.106, H.108, V.111, A.114, R.117, V.119, Y.121, N.143, I.162, V.164, Y.192, V.196, V.210, E.214, Y.215 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.111, A:A.114, A:R.117, A:V.119, A:I.162, A:V.196, A:V.210, A:E.214 Hydrogen bonds: A:Q.106, A:Q.106 Water bridges: A:R.81, A:H.108 pi-Stacking: A:Y.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakao, N. et al., Natural ligand-nonmimetic inhibitors of the lipid-transfer protein CERT. Commun Chem (2019)

Release Date

2019-02-27

Peptides

LIPID-TRANSFER PROTEIN CERT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LIPID-TRANSFER PROTEIN CERT

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