SMTL ID : 6iln.1 (3 other biounits)

Cryo-EM structure of full Echovirus 6 particle at PH 5.5

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 14 residues within 4Å: Chain A: I.85, T.87, L.97, F.105, V.107, I.134, Y.136, M.171, I.173, Y.182, N.184, L.209, F.230 Chain C: A.24 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:I.85, A:T.87, A:F.105, A:V.107, A:Y.136, A:Y.136, A:I.173, A:L.209, A:F.230, A:F.230, C:A.24 Hydrogen bonds: A:T.87, A:N.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, X. et al., Human Neonatal Fc Receptor Is the Cellular Uncoating Receptor for Enterovirus B. Cell (2019)

Release Date

2019-05-15

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

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