SMTL ID : 6ilk.1 (3 other biounits)

Cryo-EM structure of Echovirus 6 complexed with its attachment receptor CD55 at PH 7.4

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 15 residues within 4Å: Chain A: I.85, T.87, F.105, V.107, I.134, Y.136, P.158, V.160, M.171, I.173, Y.182, S.183, N.184, L.209, F.230 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.85, A:T.87, A:V.107, A:Y.136, A:V.160, A:I.173, A:Y.182, A:L.209 Hydrogen bonds: A:R.88, A:N.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, X. et al., Human Neonatal Fc Receptor Is the Cellular Uncoating Receptor for Enterovirus B. Cell (2019)

Release Date

2019-05-15

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D
Complement decay-accelerating factor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

Complement decay-accelerating factor

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