Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 6jc7.2
(1 other biounit)
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Ala
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.20 Å
Oligo State
homo-dimer
Ligands
2 x
F0G
:
(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine
(Non-covalent)
F0G.1:
15 residues within 4Å:
Chain A:
F.55
,
S.119
,
G.120
,
A.121
,
N.124
,
F.207
,
H.208
,
G.209
,
E.282
,
D.315
,
V.317
,
Q.318
,
K.344
Chain B:
S.373
,
T.374
18
PLIP interactions
:
12 interactions with chain A
,
6 interactions with chain B
Hydrophobic interactions:
A:F.207
,
A:V.317
Hydrogen bonds:
A:G.120
,
A:A.121
,
A:N.124
,
A:Q.318
,
A:K.344
,
B:T.374
,
B:T.374
,
B:T.374
,
B:T.374
Water bridges:
A:S.119
,
B:N.118
,
B:F.375
Salt bridges:
A:K.344
,
A:K.344
,
A:R.486
pi-Stacking:
A:F.207
F0G.4:
17 residues within 4Å:
Chain A:
S.373
,
T.374
Chain B:
F.55
,
S.119
,
G.120
,
A.121
,
N.124
,
F.207
,
H.208
,
G.209
,
E.282
,
G.286
,
D.315
,
V.317
,
Q.318
,
K.344
,
R.486
16
PLIP interactions
:
6 interactions with chain A
,
10 interactions with chain B
Hydrogen bonds:
A:T.374
,
A:T.374
,
A:T.374
,
A:T.374
,
B:G.120
,
B:A.121
,
B:N.124
,
B:Q.318
,
B:K.344
Water bridges:
A:N.118
,
A:F.375
Hydrophobic interactions:
B:F.55
,
B:V.317
Salt bridges:
B:K.344
,
B:R.486
pi-Stacking:
B:F.207
2 x
GOL
:
GLYCEROL
(Non-functional Binders)
GOL.2:
10 residues within 4Å:
Chain A:
R.197
,
A.229
,
L.230
,
S.231
,
S.232
Chain B:
R.197
,
A.229
,
L.230
,
S.231
,
S.232
3
PLIP interactions
:
2 interactions with chain B
,
1 interactions with chain A
Hydrogen bonds:
B:A.229
,
B:S.231
Water bridges:
A:T.228
GOL.5:
7 residues within 4Å:
Chain A:
T.79
,
V.80
,
P.89
,
R.90
Chain B:
E.27
,
Y.28
,
V.29
5
PLIP interactions
:
3 interactions with chain A
,
2 interactions with chain B
Hydrogen bonds:
A:V.80
,
A:R.90
,
A:R.90
,
B:E.27
,
B:V.29
1 x
ACY
:
ACETIC ACID
(Non-functional Binders)
ACY.3:
3 residues within 4Å:
Chain A:
R.104
,
E.105
,
Y.400
2
PLIP interactions
:
2 interactions with chain A
Hydrogen bonds:
A:E.105
Salt bridges:
A:R.104
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Xu, J. et al., Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition. Commun Biol (2020)
Release Date
2020-02-05
Peptides
CrmG:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
CrmG
Related Entries With Identical Sequence
5dds.1
|
5dds.2
|
5ddu.1
|
5ddu.2
|
5ddw.1
|
5ddw.2
|
6jc7.1
|
6jc8.1
|
6jc8.2
|
6jc9.1
|
6jc9.2
|
6jca.1
|
6jcb.1
|
6jcb.2
|
8jt3.1
|
8jt3.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme