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SMTL ID : 6ji8.1

Structure of RyR2 (F/apoCaM dataset)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-4-4-4-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1:	5 residues within 4Å: Chain A: C.4889, I.4891, C.4892, H.4909, H.4914 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.4889, A:C.4892, A:H.4914
ZN.2:	5 residues within 4Å: Chain D: C.4889, I.4891, C.4892, H.4909, H.4914 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.4889, D:C.4892, D:H.4914
ZN.3:	5 residues within 4Å: Chain G: C.4889, I.4891, C.4892, H.4909, H.4914 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:C.4889, G:C.4892, G:H.4914
ZN.4:	5 residues within 4Å: Chain J: C.4889, I.4891, C.4892, H.4909, H.4914 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:C.4889, J:C.4892, J:H.4914

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Gong, D. et al., Modulation of cardiac ryanodine receptor 2 by calmodulin. Nature (2019)

Release Date

2019-07-17

Peptides

RyR2: ADGJ
Peptidyl-prolyl cis-trans isomerase FKBP1B: BEHK
Calmodulin-1: CFIL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

G
G

J
J

B
B

E
E

H
H

K
K

C
C

F
F

I
I

L
L

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

RyR2

Toggle Identical (ADGJ)

Peptidyl-prolyl cis-trans isomerase FKBP1B

Toggle Identical (BEHK)

Calmodulin-1

Toggle Identical (CFIL)

Related Entries With Identical Sequence

1iq5.1 | 1lvc.1 | 1lvc.2 | 1lvc.3 | 1wrz.1 | 2bki.1 | 2r28.1 | 2v01.1 | 2v02.1 | 2w73.1 | 2w73.2 | 2y4v.1 | 3hr4.1 | 3hr4.2 | 3hr4.3 | 3hr4.4 | 3j41.1 | 3oxq.1 | 3oxq.2 | 3sjq.1 | 3sui.1 | 4bw7.1 | 4bw7.2 | 4bw7.3 | 4bw8.1 | 4bw8.2 | 4byf.1 | 4byf.2 | 4c02.1 | 4dck.1 more...less...

4dck.2 | 4g27.1 | 4g28.1 | 4j9y.1 | 4j9z.1 | 4jpz.1 | 4jpz.2 | 4jq0.1 | 4l79.1 | 4ovn.1 | 4ovn.2 | 4ovn.3 | 4ovn.4 | 4ovn.5 | 4q5u.1 | 4umo.1 | 4v0c.1 | 4zlk.1 | 5go9.1 | 5goa.1 | 5j03.1 | 5jqa.1 | 5k7l.1 | 5k7l.2 | 5k7l.3 | 5k8q.1 | 5nin.1 | 5nin.2 | 5t15.1 | 5t9m.1 | 5t9n.1 | 5t9r.1 | 5t9s.1 | 5t9v.1 | 5ta3.1 | 5tal.1 | 5tam.1 | 5tan.1 | 5tap.1 | 5taq.1 | 5tas.1 | 5tat.1 | 5tau.1 | 5tav.1 | 5taw.1 | 5tax.1 | 5tay.1 | 5taz.1 | 5tb0.1 | 5tb1.1 | 5tb2.1 | 5tb3.1 | 5tb4.1 | 5v02.1 | 5v03.1 | 5v7x.1 | 5vms.1 | 5vms.2 | 5vms.3 | 6b8l.1 | 6b8l.2 | 6b8l.3 | 6b8l.4 | 6b8m.1 | 6b8m.2 | 6b8m.3 | 6b8m.4 | 6b8n.1 | 6b8n.2 | 6b8n.3 | 6b8n.4 | 6b8p.1 | 6b8p.2 | 6b8p.3 | 6b8p.4 | 6b8q.1 | 6b8q.2 | 6b8q.3 | 6b8q.4 | 6cnm.1 | 6cnn.1 | 6cno.1 | 6dmw.1 | 6e2f.1 | 6e2g.1 | 6feg.1 | 6feh.1 | 6jg3.1 | 6jgz.1 | 6jh6.1 | 6jhn.1 | 6ji0.1 | 6jii.1 | 6jiu.1 | 6jiy.1 | 6jrr.1 | 6jrs.1 | 6jv2.1 | 6k4k.1 | 6k4k.2 | 6k4l.1 | 6k4l.2 | 6k4r.1 | 6k4r.2 | 6mba.1 | 6mc9.1 | 6mud.1 | 6n5w.1 | 6paw.1 | 6paw.2 | 6paw.3 | 6paw.4 | 6pbx.1 | 6pby.1 | 6pv6.1 | 6s5t.1 | 6sz5.1 | 6uzz.1 | 6v00.1 | 6v01.1 | 6xxf.1 | 6y4o.1 | 7b1g.1 | 7bf1.1 | 7bf2.1 | 7byl.1 | 7bym.1 | 7byn.1 | 7cr3.1 | 7cr4.1 | 7cr7.1 | 7jmf.1 | 7kl5.1 | 7m6a.1 | 7m6l.1 | 7sx3.1 | 7sx4.1 | 7tci.1 | 7tcp.1 | 7u9q.1 | 7u9r.1 | 7u9t.1 | 7u9x.1 | 7u9z.1 | 7ua1.1 | 7ua3.1 | 7ua4.1 | 7ua5.1 | 7ua9.1 | 7vnp.1 | 7vnq.1 | 7vnr.1 | 7wji.1 | 7wr4.1 | 7wr5.1 | 7xn4.1 | 7xn5.1 | 7xn6.1 | 8ahs.1 | 8bx7.1 | 8dgh.1 | 8dgk.1 | 8ijk.1 | 8j07.736 | 8jfk.1 | 8sik.1 | 8sim.1 | 8sin.1 | 8uq2.1 | 8uq3.1 | 8uq4.1 | 8uxc.1 | 8uxe.1 | 8uxf.1 | 8uxg.1 | 8uxh.1 | 8uxi.1 | 8uxl.1 | 8uxm.1 | 8w41.1 | 8w4u.1 | 8x43.1 | 8xya.1 | 8xyb.1

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Background

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