- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-4-4-4-mer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
CA.2: 3 residues within 4Å:- Chain B: E.3923, Q.3926, T.4932
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:E.3923, B:T.4932
CA.6: 3 residues within 4Å:- Chain E: E.3923, Q.3926, T.4932
2 PLIP interactions:2 interactions with chain E- Metal complexes: E:E.3923, E:T.4932
CA.10: 3 residues within 4Å:- Chain H: E.3923, Q.3926, T.4932
2 PLIP interactions:2 interactions with chain H- Metal complexes: H:E.3923, H:T.4932
CA.14: 3 residues within 4Å:- Chain K: E.3923, Q.3926, T.4932
2 PLIP interactions:2 interactions with chain K- Metal complexes: K:E.3923, K:T.4932
- 4 x CFF: CAFFEINE(Non-covalent)
CFF.3: 5 residues within 4Å:- Chain B: E.4195, I.4198, W.4646, I.4927, Y.4945
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.4195
- pi-Stacking: B:W.4646, B:W.4646, B:W.4646
CFF.7: 5 residues within 4Å:- Chain E: E.4195, I.4198, W.4646, I.4927, Y.4945
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:E.4195
- pi-Stacking: E:W.4646, E:W.4646, E:W.4646
CFF.11: 5 residues within 4Å:- Chain H: E.4195, I.4198, W.4646, I.4927, Y.4945
4 PLIP interactions:4 interactions with chain H- Hydrogen bonds: H:E.4195
- pi-Stacking: H:W.4646, H:W.4646, H:W.4646
CFF.15: 5 residues within 4Å:- Chain K: E.4195, I.4198, W.4646, I.4927, Y.4945
4 PLIP interactions:4 interactions with chain K- Hydrogen bonds: K:E.4195
- pi-Stacking: K:W.4646, K:W.4646, K:W.4646
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.4: 11 residues within 4Å:- Chain B: K.4167, K.4170, R.4171, M.4885, K.4888, C.4889, F.4890, I.4891, F.4906, T.4910, L.4916
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:R.4171, B:F.4890, B:T.4910, B:L.4916
- Salt bridges: B:K.4167, B:K.4167, B:K.4170, B:K.4170, B:K.4170
ATP.8: 11 residues within 4Å:- Chain E: K.4167, K.4170, R.4171, M.4885, K.4888, C.4889, F.4890, I.4891, F.4906, T.4910, L.4916
9 PLIP interactions:9 interactions with chain E- Hydrogen bonds: E:F.4890, E:T.4910, E:L.4916
- Salt bridges: E:K.4167, E:K.4167, E:K.4170, E:K.4170, E:K.4170, E:R.4171
ATP.12: 11 residues within 4Å:- Chain H: K.4167, K.4170, R.4171, M.4885, K.4888, C.4889, F.4890, I.4891, F.4906, T.4910, L.4916
9 PLIP interactions:9 interactions with chain H- Hydrogen bonds: H:F.4890, H:T.4910, H:L.4916
- Salt bridges: H:K.4167, H:K.4167, H:K.4170, H:K.4170, H:K.4170, H:R.4171
ATP.16: 11 residues within 4Å:- Chain K: K.4167, K.4170, R.4171, M.4885, K.4888, C.4889, F.4890, I.4891, F.4906, T.4910, L.4916
9 PLIP interactions:9 interactions with chain K- Hydrogen bonds: K:F.4890, K:T.4910, K:L.4916
- Salt bridges: K:K.4167, K:K.4167, K:K.4170, K:K.4170, K:K.4170, K:R.4171
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gong, D. et al., Modulation of cardiac ryanodine receptor 2 by calmodulin. Nature (2019)
- Release Date
- 2019-07-17
- Peptides
- Peptidyl-prolyl cis-trans isomerase FKBP1B: ADGJ
Ryr2: BEHK
Calmodulin-1: CFIL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AD
DG
GJ
JB
BE
EH
HK
KC
CF
FI
IL
L - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 6jii.1
Structure of RyR2 (F/A/C/L-Ca2+/apo-CaM-M dataset)
Peptidyl-prolyl cis-trans isomerase FKBP1B
Toggle Identical (ADGJ)Ryr2
Toggle Identical (BEHK)Calmodulin-1
Toggle Identical (CFIL)Related Entries With Identical Sequence
4c02.1 | 5go9.1 | 5goa.1 | 5t15.1 | 5t9m.1 | 5t9n.1 | 5t9r.1 | 5t9s.1 | 5t9v.1 | 5ta3.1 | 5tal.1 | 5tam.1 | 5tan.1 | 5tap.1 | 5taq.1 | 5tas.1 | 5tat.1 | 5tau.1 | 5tav.1 | 5taw.1 | 5tax.1 | 5tay.1 | 5taz.1 | 5tb0.1 | 5tb1.1 | 5tb2.1 | 5tb3.1 | 5tb4.1 | 6jg3.1 | 6jgz.1 more...less...6jh6.1 | 6jhn.1 | 6ji0.1 | 6ji8.1 | 6jiu.1 | 6jiy.1 | 6jrr.1 | 6jrs.1 | 6jv2.1 | 6m2w.1 | 6pv6.1 | 7jmf.1 | 7m6a.1 | 7m6l.1 | 7u9q.1 | 7u9r.1 | 7u9t.1 | 7u9x.1 | 7u9z.1 | 7ua1.1 | 7ua3.1 | 7ua4.1 | 7ua5.1 | 7ua9.1 | 8duj.1 | 8dve.1 | 8uq2.1 | 8uq3.1 | 8uq4.1 | 8uxc.1 | 8uxe.1 | 8uxf.1 | 8uxg.1 | 8uxh.1 | 8uxi.1 | 8uxl.1 | 8uxm.1 | 8xkh.1 | 8xlh.1 | 8y40.1