SMTL ID : 6jno.1

RXRa structure complexed with CU-6PMN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-tetramer

Ligands

1 x WY5: 7-oxidanyl-2-oxidanylidene-6-(3,5,5,8,8-pentamethyl-6,7-dihydronaphthalen-2-yl)chromene-3-carboxylic acid(Non-covalent)

WY5.1: 8 residues within 4Å: Chain A: S.120, L.217, F.220, K.221, D.225 Chain D: R.83, W.86, L.214 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain D Hydrophobic interactions: A:F.220, D:W.86, D:L.214 Hydrogen bonds: A:K.221, A:K.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, S. et al., Competitive Binding Assay with an Umbelliferone-Based Fluorescent Rexinoid for Retinoid X Receptor Ligand Screening. J.Med.Chem. (2019)

Release Date

2019-11-20

Peptides

Retinoic acid receptor RXR-alpha: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Retinoic acid receptor RXR-alpha

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