SMTL ID : 6jrc.1

ZHD complex with hydrolyzed alpha-ZOL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x C3L: 2-[(~{E},6~{R},10~{S})-6,10-bis(oxidanyl)undec-1-enyl]-4,6-bis(oxidanyl)benzoic acid(Non-covalent)

C3L.1: 14 residues within 4Å: Chain A: S.102, S.103, P.128, T.129, K.130, L.132, L.135, W.183, Y.187, P.188, I.191, P.192, S.220, F.221 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.132, A:P.188, A:P.192, A:F.221, A:F.221 Hydrogen bonds: A:S.103, A:T.129, A:K.130, A:L.132, A:L.132, A:Y.187 Water bridges: A:S.102, A:S.220, A:H.242 pi-Stacking: A:W.183 C3L.6: 15 residues within 4Å: Chain B: S.102, S.103, P.128, T.129, K.130, L.132, L.135, V.158, W.183, Y.187, P.188, I.191, P.192, S.220, F.221 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:P.128, B:L.132, B:V.158, B:P.188, B:P.192, B:F.221 Hydrogen bonds: B:S.103, B:T.129, B:K.130, B:K.130, B:L.132, B:L.132, B:Y.187, B:S.220 Water bridges: B:S.102, B:H.242 pi-Stacking: B:W.183

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: Q.19, R.52, L.91 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.19, A:L.91 Water bridges: A:R.52 GOL.3: 6 residues within 4Å: Chain A: Q.78, P.193, S.194, A.195, P.196, Q.198 3 PLIP interactions: 3 interactions with chain A Water bridges: A:P.193, A:A.195, A:Q.198 GOL.4: 4 residues within 4Å: Chain A: T.6, Y.16, R.63, K.66 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.66 Water bridges: A:K.66 GOL.7: 4 residues within 4Å: Chain B: G.60, A.65, Y.72, V.182 No protein-ligand interaction detected (PLIP) GOL.8: 8 residues within 4Å: Chain B: Q.37, M.38, D.40, S.41, L.168, Y.245, V.246, P.249 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.41 Water bridges: B:Q.37, B:D.40, B:S.42 GOL.9: 8 residues within 4Å: Chain B: L.155, N.156, D.157, V.158, S.159, G.160, S.162, M.241 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.157, B:G.160, B:S.162, B:S.162

2 x K: POTASSIUM ION(Non-covalent)

K.5: 4 residues within 4Å: Chain A: H.248, P.249, D.250, V.251 No protein-ligand interaction detected (PLIP) K.10: 4 residues within 4Å: Chain B: H.248, P.249, D.250, V.251 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, X.J. et al., Structure of ZHD complex. To Be Published

Release Date

2020-04-08

Peptides

Zearalenone hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Zearalenone hydrolase

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