- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-12-mer
- Ligands
- 24 x MG: MAGNESIUM ION(Non-covalent)
- 12 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
NAI.2: 22 residues within 4Å:- Chain A: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.3
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:Y.23, A:N.25, A:N.25, A:Q.26, A:Q.26, A:G.27, A:N.45, A:Y.50, A:D.80, A:D.80, A:V.132
NAI.7: 22 residues within 4Å:- Chain B: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
- Ligands: 9TY.8
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:Y.23, B:Y.23, B:N.25, B:N.25, B:Q.26, B:G.27, B:N.45, B:V.46, B:Y.50, B:D.80, B:D.80, B:V.132
NAI.10: 21 residues within 4Å:- Chain C: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:Y.23, C:G.24, C:N.25, C:N.25, C:Q.26, C:G.27, C:N.45, C:Y.50, C:D.80
NAI.15: 22 residues within 4Å:- Chain D: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
- Ligands: 9TY.16
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:Y.23, D:N.25, D:N.25, D:Q.26, D:N.45, D:Y.50, D:D.80, D:V.132
NAI.18: 21 residues within 4Å:- Chain E: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
7 PLIP interactions:7 interactions with chain E- Hydrogen bonds: E:Y.23, E:N.25, E:N.25, E:Q.26, E:N.45, E:D.80, E:D.80
NAI.23: 20 residues within 4Å:- Chain F: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, A.106, S.107, P.129, M.131, V.132, G.133
11 PLIP interactions:11 interactions with chain F- Hydrogen bonds: F:Y.23, F:G.24, F:N.25, F:N.25, F:Q.26, F:Q.26, F:G.27, F:N.45, F:Y.50, F:D.80, F:V.132
NAI.26: 21 residues within 4Å:- Chain G: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
9 PLIP interactions:9 interactions with chain G- Hydrogen bonds: G:Y.23, G:N.25, G:N.25, G:Q.26, G:N.45, G:Y.50, G:D.80, G:D.80, G:V.132
NAI.31: 22 residues within 4Å:- Chain H: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
- Ligands: 9TY.32
7 PLIP interactions:7 interactions with chain H- Hydrogen bonds: H:Y.23, H:N.25, H:N.25, H:Q.26, H:N.45, H:D.80, H:D.80
NAI.34: 22 residues within 4Å:- Chain I: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
- Ligands: 9TY.35
8 PLIP interactions:8 interactions with chain I- Hydrogen bonds: I:Y.23, I:N.25, I:N.25, I:Q.26, I:G.27, I:N.45, I:D.80, I:D.80
NAI.39: 21 residues within 4Å:- Chain J: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
10 PLIP interactions:10 interactions with chain J- Hydrogen bonds: J:Y.23, J:N.25, J:N.25, J:Q.26, J:G.27, J:N.45, J:Y.50, J:D.80, J:D.80, J:V.132
NAI.42: 22 residues within 4Å:- Chain K: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
- Ligands: 9TY.43
10 PLIP interactions:10 interactions with chain K- Hydrogen bonds: K:Y.23, K:Y.23, K:N.25, K:N.25, K:Q.26, K:G.27, K:Y.50, K:D.80, K:D.80, K:V.132
NAI.47: 21 residues within 4Å:- Chain L: G.22, Y.23, G.24, N.25, Q.26, G.27, N.45, V.46, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, V.86, A.106, S.107, P.129, M.131, V.132
10 PLIP interactions:10 interactions with chain L- Hydrogen bonds: L:Y.23, L:N.25, L:N.25, L:Q.26, L:G.27, L:N.45, L:V.46, L:D.80, L:D.80, L:V.132
- 12 x 9TY: cyclopropane-1,1-dicarboxylic acid(Non-covalent)
9TY.3: 11 residues within 4Å:- Chain A: V.132, D.191, E.195
- Chain B: E.227, E.233, H.253, S.254, S.257
- Ligands: MG.1, NAI.2, MG.5
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.254, B:S.254
9TY.8: 10 residues within 4Å:- Chain A: E.233, H.253, S.254, S.257
- Chain B: V.132, D.191, E.195
- Ligands: MG.4, MG.6, NAI.7
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.254, A:S.254
9TY.11: 9 residues within 4Å:- Chain C: V.132, D.191, E.195
- Chain D: E.233, H.253, S.254, S.257
- Ligands: MG.9, MG.13
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.254, D:S.254
9TY.16: 11 residues within 4Å:- Chain C: E.227, E.233, H.253, S.254, S.257
- Chain D: V.132, D.191, E.195
- Ligands: MG.12, MG.14, NAI.15
3 PLIP interactions:1 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:E.195, C:S.254, C:S.254
9TY.19: 9 residues within 4Å:- Chain E: V.132, D.191, E.195
- Chain F: E.233, H.253, S.254, S.257
- Ligands: MG.17, MG.21
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:S.254, F:S.254
9TY.24: 9 residues within 4Å:- Chain E: E.233, H.253, S.254, S.257
- Chain F: V.132, D.191, E.195
- Ligands: MG.20, MG.22
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:S.254, E:S.254
9TY.27: 10 residues within 4Å:- Chain G: V.132, D.191, E.195
- Chain H: E.227, E.233, H.253, S.254, S.257
- Ligands: MG.25, MG.29
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:S.254
9TY.32: 10 residues within 4Å:- Chain G: E.233, H.253, S.254, S.257
- Chain H: V.132, D.191, E.195
- Ligands: MG.28, MG.30, NAI.31
3 PLIP interactions:2 interactions with chain G, 1 interactions with chain H- Hydrogen bonds: G:S.254, G:S.254, H:D.191
9TY.35: 10 residues within 4Å:- Chain I: V.132, D.191, E.195
- Chain J: E.233, H.253, S.254, S.257
- Ligands: MG.33, NAI.34, MG.37
2 PLIP interactions:2 interactions with chain J- Hydrogen bonds: J:S.254, J:S.254
9TY.40: 9 residues within 4Å:- Chain I: E.233, H.253, S.254, S.257
- Chain J: V.132, D.191, E.195
- Ligands: MG.36, MG.38
1 PLIP interactions:1 interactions with chain I- Hydrogen bonds: I:S.254
9TY.43: 11 residues within 4Å:- Chain K: V.132, D.191, E.195
- Chain L: E.227, E.233, H.253, S.254, S.257
- Ligands: MG.41, NAI.42, MG.44
2 PLIP interactions:2 interactions with chain L- Hydrogen bonds: L:S.254, L:S.254
9TY.48: 9 residues within 4Å:- Chain K: E.233, H.253, S.254, S.257
- Chain L: V.132, D.191, E.195
- Ligands: MG.45, MG.46
1 PLIP interactions:1 interactions with chain K- Hydrogen bonds: K:S.254
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chen, C.Y. et al., Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions. J.Am.Chem.Soc. (2019)
- Release Date
- 2020-03-25
- Peptides
- Ketol-acid reductoisomerase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-12-mer
- Ligands
- 24 x MG: MAGNESIUM ION(Non-covalent)
- 12 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 12 x 9TY: cyclopropane-1,1-dicarboxylic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chen, C.Y. et al., Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions. J.Am.Chem.Soc. (2019)
- Release Date
- 2020-03-25
- Peptides
- Ketol-acid reductoisomerase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L