- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 3.23 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 144 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
CLA.1: 26 residues within 4Å:- Chain A: F.442, I.528, F.531, Y.590, N.591, S.594, V.595, F.598, W.636, L.641, A.645, I.649, F.663, H.667, W.670, Y.722, G.726, T.729, T.730, F.733
- Chain B: L.619, L.623, W.624
- Ligands: CLA.3, CLA.54, CLA.57
17 PLIP interactions:15 interactions with chain A, 2 interactions with chain B,- Hydrophobic interactions: A:F.442, A:I.528, A:I.528, A:F.531, A:V.595, A:W.636, A:L.641, A:I.649, A:W.670, A:T.729, A:F.733, B:L.619, B:L.623
- Hydrogen bonds: A:Y.590, A:T.730
- pi-Stacking: A:W.670, A:W.670
CLA.2: 21 residues within 4Å:- Chain A: F.668, A.671, F.672, L.674, M.675, F.678, Y.683, W.684, L.687
- Chain B: S.422, S.425, L.426, G.429, L.524, T.528, L.531, I.532, L.577, F.580, W.581
- Ligands: CLA.54
15 PLIP interactions:8 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: A:F.668, A:A.671, A:F.672, A:L.674, A:M.675, A:F.678, A:Y.683, A:W.684, B:L.426, B:T.528, B:I.532, B:L.577, B:L.577, B:F.580
- pi-Stacking: B:W.581
CLA.3: 22 residues within 4Å:- Chain A: F.442, I.446, D.449, F.531, W.588, N.591, I.633, L.637, Y.722
- Chain B: W.647, L.650, H.653, L.654, W.656, A.657
- Ligands: CLA.1, CLA.57, CLA.58, CLA.64, CLA.65, BCR.103, BCR.117
11 PLIP interactions:4 interactions with chain B, 7 interactions with chain A,- Hydrophobic interactions: B:W.647, B:L.654, B:A.657, A:F.442, A:F.442, A:I.446, A:F.531, A:W.588, A:I.633, A:Y.722
- Salt bridges: B:H.653
CLA.4: 16 residues within 4Å:- Chain A: P.21, I.38, H.42
- Chain F: I.119
- Chain J: A.11, P.12, T.16, F.19, G.20
- Ligands: CLA.5, CLA.12, PQN.44, CLA.54, BCR.55, CLA.108, BCR.119
9 PLIP interactions:3 interactions with chain J, 5 interactions with chain A, 1 interactions with chain F,- Hydrophobic interactions: J:F.19, J:F.19, J:F.19, A:P.21, A:I.38, F:I.119
- pi-Stacking: A:H.42, A:H.42
- Metal complexes: A:H.42
CLA.5: 14 residues within 4Å:- Chain A: W.18, H.23, F.24, A.45, H.46, F.48, G.68, Q.69, V.72
- Ligands: CLA.4, CLA.6, CLA.7, CLA.12, LHG.46
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.18, A:A.45, A:F.48, A:V.72
- Salt bridges: A:H.23
- Metal complexes: A:H.46
CLA.6: 23 residues within 4Å:- Chain A: H.46, F.48, V.62, A.65, H.66, Q.69, L.70, I.73, F.74, F.158, W.338, H.339, L.342, N.345, L.346, L.349
- Ligands: CLA.5, CLA.7, CLA.14, CLA.26, CLA.31, BCR.48, BCR.49
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:F.48, A:V.62, A:A.65, A:Q.69, A:Q.69, A:I.73, A:I.73, A:F.74, A:F.74, A:F.158, A:W.338, A:L.342, A:L.342, A:L.342
- Hydrogen bonds: A:N.345
- pi-Cation interactions: A:H.66
- Metal complexes: A:H.66
CLA.7: 14 residues within 4Å:- Chain A: H.46, Q.69, V.72, I.73, W.76, L.349
- Ligands: CLA.5, CLA.6, CLA.12, CLA.30, CLA.31, LHG.46, BCR.49, BCR.119
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:V.72, A:I.73, A:W.76, A:L.349
- Salt bridges: A:H.46
CLA.8: 11 residues within 4Å:- Chain A: W.76, S.78, G.79, F.82, H.83, F.87, V.106, W.108
- Ligands: CLA.9, CLA.10, BCR.119
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:F.82
- pi-Stacking: A:H.83, A:F.87
CLA.9: 14 residues within 4Å:- Chain A: M.80, A.104, Q.105, I.127, Q.128, I.129, T.130, S.131, A.658, Y.659
- Ligands: CLA.8, CLA.10, CLA.29, BCR.119
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:I.127, A:T.130, A:A.658, A:Y.659
- Hydrogen bonds: A:T.130, A:S.131, A:S.131
CLA.10: 16 residues within 4Å:- Chain A: Q.105, V.106, V.107, W.108, Q.113, L.116, I.127
- Chain B: V.441, F.445
- Chain J: I.27
- Ligands: CLA.8, CLA.9, CLA.29, BCR.55, CLA.88, BCR.119
8 PLIP interactions:5 interactions with chain A, 2 interactions with chain B, 1 interactions with chain J,- Hydrophobic interactions: A:V.107, A:I.127, B:V.441, B:F.445, J:I.27
- Hydrogen bonds: A:Q.105, A:W.108, A:Q.113
CLA.11: 18 residues within 4Å:- Chain A: I.4, V.6, F.63, F.67, M.162, F.164, A.165, F.168, H.169, A.173, W.179
- Chain P: G.32, G.33, F.34, I.35
- Ligands: CLA.13, CLA.14, CLA.171
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain P,- Hydrophobic interactions: A:I.4, A:F.63, A:F.67, A:F.164, A:A.165, A:F.168, A:W.179
- Metal complexes: A:H.169
- Hydrogen bonds: P:F.34
CLA.12: 21 residues within 4Å:- Chain A: V.11, K.12, T.13, S.14, F.15, K.17, W.18, H.23, K.61, S.64, G.68, L.163, G.166, W.167, Y.170, H.171
- Chain J: Y.7
- Ligands: CLA.4, CLA.5, CLA.7, BCR.119
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:F.15, A:K.17, A:W.18, A:W.18, A:W.167, A:Y.170, A:Y.170
- Hydrogen bonds: A:K.61
- Salt bridges: A:H.23, A:K.61
CLA.13: 14 residues within 4Å:- Chain A: V.2, K.3, I.4, W.179, N.182, S.185, H.189, N.304, F.305
- Chain P: L.23, L.25
- Ligands: CLA.11, CLA.14, CLA.21
5 PLIP interactions:1 interactions with chain P, 4 interactions with chain A,- Hydrophobic interactions: P:L.23, A:I.4
- Hydrogen bonds: A:S.185
- pi-Cation interactions: A:H.189, A:H.189
CLA.14: 19 residues within 4Å:- Chain A: F.63, H.66, F.67, L.70, M.162, W.179, F.180, N.182, M.186, H.189, H.190, L.194
- Ligands: CLA.6, CLA.11, CLA.13, CLA.26, CLA.30, BCR.49, CLA.171
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:F.63, A:W.179, A:F.180, A:M.186, A:L.194, A:L.194
- Salt bridges: A:H.66
- pi-Stacking: A:H.190, A:H.190
CLA.15: 17 residues within 4Å:- Chain A: S.140, G.141, I.142, Q.147, T.150, T.151, A.201, W.202, H.205, H.208, V.209, P.229, I.233
- Ligands: CLA.16, CLA.17, BCR.48, BCR.49
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:A.201, A:W.202, A:H.205, A:H.208, A:I.233
- Hydrogen bonds: A:T.150, A:T.151
- pi-Cation interactions: A:H.205, A:H.205
- Metal complexes: A:H.205
CLA.16: 17 residues within 4Å:- Chain A: L.200, A.201, G.204, V.207, H.208, F.232, I.233, R.236, F.246, G.249, L.250, L.288
- Chain P: I.188, F.189
- Ligands: CLA.15, BCR.48, BCR.123
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain P,- Hydrophobic interactions: A:V.207, A:F.246, A:L.250, A:L.288, A:L.288, P:I.188, P:F.189
- Hydrogen bonds: A:R.236
- Salt bridges: A:H.208
- pi-Stacking: A:H.208
CLA.17: 8 residues within 4Å:- Chain A: L.146, T.150, L.228, H.230, L.234
- Chain P: P.86
- Ligands: CLA.15, BCR.48
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:T.150, A:H.230, A:L.234
- pi-Stacking: A:H.230, A:H.230
CLA.18: 19 residues within 4Å:- Chain A: F.253, W.258, S.259, Y.261, L.265, T.266, F.267, H.285, L.288, A.289, V.292, L.293, N.490
- Chain K: V.71, G.72, L.75
- Ligands: CLA.19, CLA.37, CLA.124
18 PLIP interactions:15 interactions with chain A, 3 interactions with chain K,- Hydrophobic interactions: A:F.253, A:W.258, A:Y.261, A:L.265, A:L.265, A:L.288, A:L.288, A:A.289, A:V.292, A:L.293, K:V.71, K:L.75, K:L.75
- Hydrogen bonds: A:N.490
- Salt bridges: A:H.285
- pi-Stacking: A:W.258, A:H.285
- Metal complexes: A:H.285
CLA.19: 14 residues within 4Å:- Chain A: F.267, D.282, T.283, H.285, H.286, I.290, L.293, H.359, M.363, T.495
- Ligands: CLA.18, CLA.20, CLA.28, CLA.36
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:F.267, A:F.267, A:T.283, A:I.290, A:L.293
- pi-Cation interactions: A:H.286
CLA.20: 15 residues within 4Å:- Chain A: L.136, A.139, L.195, G.198, S.199, W.202, Q.206, H.286, H.287, I.290, P.365, Y.366
- Ligands: CLA.19, CLA.30, BCR.49
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:L.195, A:W.202, A:W.202, A:I.290, A:P.365, A:P.365
- Hydrogen bonds: A:Q.206
- Salt bridges: A:H.287
- pi-Stacking: A:W.202, A:H.286, A:H.287
CLA.21: 15 residues within 4Å:- Chain A: N.188, H.189, A.192, G.193, L.197, L.295, H.299, Y.301, T.303, F.305, I.307
- Chain K: L.60, A.61
- Ligands: CLA.13, BCR.123
11 PLIP interactions:9 interactions with chain A, 2 interactions with chain K,- Hydrophobic interactions: A:N.188, A:A.192, A:L.197, A:L.197, A:L.295, A:F.305, K:L.60, K:A.61
- pi-Stacking: A:H.299, A:H.299
- Metal complexes: A:H.299
CLA.22: 11 residues within 4Å:- Chain A: L.187, L.191, F.294, A.297, M.300, Y.301, I.314
- Ligands: CLA.23, CLA.24, CLA.25, CLA.26
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.187, A:L.191, A:A.297
- Hydrogen bonds: A:Y.301
CLA.23: 14 residues within 4Å:- Chain A: V.296, H.299, M.300, I.307, G.308, H.309
- Chain K: P.27, K.32, S.33, L.37
- Ligands: CLA.22, CLA.24, BCR.123, CLA.126
10 PLIP interactions:2 interactions with chain K, 8 interactions with chain A,- Hydrophobic interactions: K:P.27, A:H.299, A:M.300, A:I.307
- Hydrogen bonds: K:S.33, A:G.308
- Salt bridges: A:H.309
- pi-Stacking: A:H.309, A:H.309, A:H.309
CLA.24: 12 residues within 4Å:- Chain A: M.300, H.309, E.313, I.314, A.317, H.318
- Chain K: A.35, L.37
- Ligands: CLA.22, CLA.23, CLA.25, CLA.45
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:I.314
- pi-Stacking: A:H.318
- pi-Cation interactions: A:H.318
- Metal complexes: A:H.318
CLA.25: 13 residues within 4Å:- Chain A: I.314, L.315, H.318, H.327, L.330, L.415
- Ligands: CLA.22, CLA.24, CLA.26, CLA.32, CLA.45, LHG.47, BCR.50
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:L.330, A:L.330, A:L.415
- Salt bridges: A:H.318
- pi-Stacking: A:H.327
- Metal complexes: A:H.327
CLA.26: 27 residues within 4Å:- Chain A: L.55, S.59, H.66, L.177, F.180, V.183, M.186, L.187, H.190, L.191, M.311, L.334, T.335, T.336, S.337, W.338, Q.341, I.344, N.345, M.348, L.349
- Ligands: CLA.6, CLA.14, CLA.22, CLA.25, CLA.30, BCR.50
15 PLIP interactions:15 interactions with chain A,- Hydrophobic interactions: A:L.55, A:L.177, A:V.183, A:V.183, A:V.183, A:L.187, A:L.187, A:L.334, A:L.334, A:T.335, A:W.338, A:I.344, A:N.345, A:M.348
- Salt bridges: A:H.190
CLA.27: 16 residues within 4Å:- Chain A: I.354, I.355, H.358, M.384, V.391, I.533, T.536, V.537, I.593
- Ligands: CLA.28, CLA.38, CLA.39, CLA.40, LHG.47, BCR.50, BCR.51
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.354, A:V.391, A:T.536, A:V.537, A:I.593
- Salt bridges: A:H.358
CLA.28: 13 residues within 4Å:- Chain A: I.355, H.358, H.359, A.362, M.363, T.495, S.496, W.499
- Ligands: CLA.19, CLA.27, CLA.36, CLA.38, BCR.51
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:W.499, A:W.499
- pi-Cation interactions: A:H.359
- Metal complexes: A:H.359
CLA.29: 19 residues within 4Å:- Chain A: W.76, M.80, T.130, S.131, F.133, S.378, T.381, H.382, W.385, L.662, I.727, W.731
- Ligands: CLA.9, CLA.10, CLA.30, CLA.31, BCR.52, CLA.54, BCR.119
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:T.130, A:T.381, A:H.382, A:W.385, A:L.662, A:I.727, A:I.727, A:W.731
- pi-Stacking: A:H.382
CLA.30: 20 residues within 4Å:- Chain A: L.77, S.131, G.132, F.133, L.136, L.349, L.352, T.353, V.356, M.360, Y.366, L.379, H.382, H.383
- Ligands: CLA.7, CLA.14, CLA.20, CLA.26, CLA.29, BCR.49
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.133, A:L.349, A:L.352, A:V.356, A:L.379
- Hydrogen bonds: A:Y.366
- pi-Stacking: A:H.382, A:H.383
CLA.31: 20 residues within 4Å:- Chain A: H.42, A.43, H.46, D.47, L.342, L.346, F.389, G.393, H.397, I.400, R.404, F.561, R.562, W.579
- Ligands: CLA.6, CLA.7, CLA.29, CLA.42, LHG.46, BCR.52
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.342, A:L.342, A:L.346, A:L.346
- Hydrogen bonds: A:A.45, A:H.46, A:R.562
- Salt bridges: A:H.46, A:R.404, A:R.562
CLA.32: 13 residues within 4Å:- Chain A: F.322, T.323, L.415, R.418, H.422, I.426, H.429
- Chain L: I.5, T.19
- Ligands: CLA.25, CLA.33, CLA.40, LHG.47
11 PLIP interactions:9 interactions with chain A, 2 interactions with chain L,- Hydrophobic interactions: A:L.415, A:I.426, A:H.429, L:I.5, L:T.19
- Hydrogen bonds: A:R.418
- Salt bridges: A:R.418, A:H.422
- pi-Cation interactions: A:H.422, A:H.422
- Metal complexes: A:H.422
CLA.33: 13 residues within 4Å:- Chain A: H.429, W.432
- Chain B: A.680, R.683, P.685
- Chain L: F.17, T.19, V.21, T.22
- Ligands: CLA.32, CLA.39, CLA.43, BCR.128
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain L,- Hydrophobic interactions: A:W.432, L:V.21, L:V.21
- pi-Stacking: A:H.429, A:H.429
CLA.34: 12 residues within 4Å:- Chain A: W.432, I.435, F.439, H.440
- Ligands: CLA.35, CLA.43, CLA.58, BCR.103, BCR.117, BCR.128, CLA.131, BCR.132
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:F.439
- pi-Stacking: A:H.440, A:H.440
- Metal complexes: A:H.440
CLA.35: 23 residues within 4Å:- Chain A: F.439, G.443, L.444, I.446, H.447, M.451, R.456, D.459, F.461
- Chain L: P.61, F.62, T.65, G.66, P.67, R.69
- Ligands: CLA.34, CLA.58, CLA.64, CLA.65, BCR.117, BCR.128, CLA.130, CLA.131
11 PLIP interactions:8 interactions with chain A, 3 interactions with chain L,- Hydrophobic interactions: A:L.444, A:F.461, L:P.61, L:F.62
- Hydrogen bonds: A:R.456, A:R.456
- Salt bridges: A:H.447, A:R.456, L:R.69
- pi-Stacking: A:H.447
- Metal complexes: A:H.447
CLA.36: 12 residues within 4Å:- Chain A: W.475, I.476, T.479, H.480, A.483, T.487, T.495
- Ligands: CLA.19, CLA.28, CLA.37, CLA.38, BCR.51
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:W.475, A:I.476, A:T.479, A:T.487
- pi-Cation interactions: A:H.480, A:H.480
- Metal complexes: A:H.480
CLA.37: 10 residues within 4Å:- Chain A: F.267, T.487, A.488, P.489, N.490, A.491
- Ligands: CLA.18, CLA.36, BCR.51, CLA.124
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:P.489
- Hydrogen bonds: A:N.490
- Metal complexes: A:T.487
CLA.38: 17 residues within 4Å:- Chain A: H.358, Y.361, F.472, A.473, I.476, Q.477, W.499, H.526, H.529, V.596, H.599, K.603
- Ligands: CLA.27, CLA.28, CLA.36, CLA.39, CLA.40
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:H.529, A:V.596, A:V.596, A:K.603
- Hydrogen bonds: A:Q.477
- pi-Stacking: A:H.358
- pi-Cation interactions: A:H.526
CLA.39: 17 residues within 4Å:- Chain A: V.433, F.436, L.437, P.470, V.471, F.472, A.473, F.523, H.526, H.527, A.530, H.534
- Ligands: CLA.27, CLA.33, CLA.38, CLA.40, BCR.128
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:V.433, A:F.436, A:L.437, A:L.437, A:V.471, A:F.472
- Hydrogen bonds: A:F.472, A:A.473
- Salt bridges: A:H.526
- pi-Stacking: A:F.523
- pi-Cation interactions: A:H.527, A:H.527
CLA.40: 10 residues within 4Å:- Chain A: I.426, L.430, A.530, I.533, H.534, V.537
- Ligands: CLA.27, CLA.32, CLA.38, CLA.39
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.430, A:I.533, A:V.537, A:V.537
- Salt bridges: A:H.534
CLA.41: 18 residues within 4Å:- Chain A: I.691, A.694, H.695, L.698, V.700
- Chain B: S.419, S.422, W.423, L.426, F.430
- Chain F: G.98, G.101, Y.104
- Ligands: BCR.56, CLA.86, CLA.87, CLA.108, CLA.110
6 PLIP interactions:1 interactions with chain F, 4 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: F:Y.104, A:I.691, A:I.691, A:L.698, A:V.700, B:F.430
CLA.42: 13 residues within 4Å:- Chain A: W.39, F.672, F.676, L.709, Q.713, V.717, A.720, H.721, L.724
- Ligands: CLA.31, LHG.46, BCR.52, BCR.56
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:W.39, A:F.672, A:F.676, A:L.709, A:V.717, A:L.724
- Hydrogen bonds: A:Q.713
- pi-Stacking: A:H.721, A:H.721
- Metal complexes: A:H.721
CLA.43: 18 residues within 4Å:- Chain A: N.431, W.432, I.435
- Chain B: L.677, A.680, H.681, T.684, A.687, V.690
- Chain L: L.58
- Ligands: CLA.33, CLA.34, CLA.94, PQN.97, BCR.103, BCR.128, CLA.130, BCR.132
6 PLIP interactions:4 interactions with chain B, 1 interactions with chain L, 1 interactions with chain A,- Hydrophobic interactions: B:L.677, B:T.684, B:A.687, B:V.690, L:L.58, A:I.435
CLA.45: 11 residues within 4Å:- Chain A: A.317, H.318, K.319, P.321, F.322
- Chain L: K.1, V.4
- Ligands: CLA.24, CLA.25, LHG.47, BCR.50
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain L,- Hydrophobic interactions: A:P.321, A:F.322
- pi-Stacking: A:F.322
- Salt bridges: L:K.1
CLA.54: 22 residues within 4Å:- Chain A: L.661, L.664, H.667, F.668, W.670, A.671
- Chain B: V.437, D.440, F.580, W.581, N.584, W.588, L.615, L.619
- Ligands: CLA.1, CLA.2, CLA.4, CLA.29, BCR.52, CLA.57, CLA.88, BCR.119
12 PLIP interactions:5 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: A:L.661, A:F.668, A:W.670, A:A.671, B:V.437, B:V.437, B:W.581, B:W.581, B:N.584, B:L.615
- Salt bridges: A:H.667
- pi-Stacking: B:W.588
CLA.57: 19 residues within 4Å:- Chain A: L.637, L.641, W.642
- Chain B: N.584, W.588, F.591, L.623, S.627, I.631, F.649, H.653, W.656, Y.716, T.719, Y.720, F.723
- Ligands: CLA.1, CLA.3, CLA.54
9 PLIP interactions:2 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: A:L.637, A:L.641, B:L.623, B:I.631, B:W.656, B:W.656, B:T.719, B:F.723
- pi-Stacking: B:W.656
CLA.58: 25 residues within 4Å:- Chain A: N.431, C.434, I.435, G.438, F.439, F.442, F.531, L.538, I.539, F.587, W.588
- Chain B: A.657, T.658, F.660, M.661, I.664, Y.669, W.670, L.673
- Ligands: CLA.3, CLA.34, CLA.35, CLA.65, CLA.95, BCR.103
9 PLIP interactions:4 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:I.435, A:F.442, A:I.539, A:F.587, B:A.657, B:F.660, B:I.664, B:Y.669, B:W.670
CLA.59: 17 residues within 4Å:- Chain B: F.4, K.6, F.7, I.24, A.27, H.28, F.30, K.44, S.48, I.55
- Chain M: G.25, L.28, Y.29
- Ligands: CLA.60, CLA.61, DGD.104, BCR.132
12 PLIP interactions:9 interactions with chain B, 3 interactions with chain M,- Hydrophobic interactions: B:F.4, B:I.24, B:A.27, B:F.30, B:I.55, M:L.28, M:L.28, M:L.28
- Salt bridges: B:K.6, B:K.44
- pi-Stacking: B:H.28
- Metal complexes: B:H.28
CLA.60: 19 residues within 4Å:- Chain B: H.28, F.30, I.45, S.48, H.49, Q.52, L.53, R.173, H.177, L.329, L.333, A.336, L.340
- Ligands: CLA.59, CLA.61, CLA.68, CLA.79, CLA.84, BCR.99
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:F.30, B:F.30, B:I.45, B:I.45, B:Q.52, B:L.329, B:L.329, B:L.329, B:L.333
- pi-Cation interactions: B:H.49
- Metal complexes: B:H.49
CLA.61: 14 residues within 4Å:- Chain B: H.28, Q.52, I.55, I.56, W.59, L.340, F.380
- Ligands: CLA.59, CLA.60, CLA.82, CLA.83, CLA.84, BCR.99, DGD.104
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:I.55, B:I.56, B:W.59, B:W.59, B:W.59, B:L.340, B:F.380
- Salt bridges: B:H.28, B:H.28
CLA.62: 21 residues within 4Å:- Chain B: L.58, W.59, G.62, F.65, H.66, W.69, Q.70, H.88, A.89, L.142
- Chain I: L.6, P.7, F.10, V.11, I.14
- Chain M: A.10, L.11, A.14
- Ligands: CLA.63, CLA.64, BCR.117
15 PLIP interactions:3 interactions with chain M, 8 interactions with chain B, 4 interactions with chain I,- Hydrophobic interactions: M:A.10, M:L.11, M:A.14, B:F.65, B:F.65, B:W.69, B:L.142, I:F.10, I:F.10, I:F.10, I:I.14
- Hydrogen bonds: B:Q.70
- Salt bridges: B:H.66
- pi-Stacking: B:H.66
- Metal complexes: B:H.66
CLA.63: 17 residues within 4Å:- Chain B: N.63, V.67, A.87, H.88, N.113, I.114, A.115, Y.116, S.117, V.644, W.645, M.648
- Ligands: CLA.62, CLA.64, CLA.82, BCR.103, BCR.117
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:A.87, B:Y.116, B:V.644, B:W.645
- Hydrogen bonds: B:Y.116, B:S.117, B:S.117
CLA.64: 24 residues within 4Å:- Chain A: A.453, L.454
- Chain B: H.88, I.90, W.91, D.92, P.93, H.94, F.95, N.113, S.643, V.644
- Chain I: F.18, T.22, M.23
- Ligands: CLA.3, CLA.35, CLA.62, CLA.63, CLA.65, CLA.95, BCR.103, BCR.117, BCR.132
8 PLIP interactions:1 interactions with chain I, 3 interactions with chain A, 4 interactions with chain B,- Hydrophobic interactions: I:F.18, A:A.453, A:L.454, A:L.454, B:F.95, B:V.644
- Hydrogen bonds: B:W.91
- pi-Stacking: B:H.94
CLA.65: 13 residues within 4Å:- Chain B: P.93, H.94
- Chain H: L.72
- Chain I: G.15
- Chain L: P.67, L.68, A.81
- Ligands: CLA.3, CLA.35, CLA.58, CLA.64, BCR.117, BCR.128
2 PLIP interactions:2 interactions with chain B,- pi-Cation interactions: B:H.94
- Metal complexes: B:H.94
CLA.66: 12 residues within 4Å:- Chain B: F.46, F.50, I.150, A.151, L.154, H.155, W.160, P.162, W.166
- Chain G: R.51
- Ligands: CLA.67, CLA.68
9 PLIP interactions:8 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:F.46, B:I.150, B:A.151, B:L.154, B:P.162, B:W.166
- pi-Stacking: B:H.155
- Metal complexes: B:H.155
- Salt bridges: G:R.51
CLA.67: 12 residues within 4Å:- Chain B: W.166, N.169, S.172, H.176, T.292, N.293, F.294
- Chain G: R.51
- Ligands: CLA.66, CLA.68, CLA.75, BCR.99
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:F.294, G:R.51
- Hydrogen bonds: B:S.172
- pi-Cation interactions: B:H.176, B:H.176
- Metal complexes: B:H.176
CLA.68: 22 residues within 4Å:- Chain B: F.46, H.49, F.50, L.53, W.122, W.166, F.167, N.169, S.172, R.173, H.176, H.177, G.180, L.181, F.182, Y.357
- Ligands: CLA.60, CLA.66, CLA.67, CLA.73, CLA.83, BCR.99
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:F.46, B:W.122, B:W.166, B:W.166, B:F.167, B:R.173, B:R.173, B:L.181, B:L.181, B:F.182
- Hydrogen bonds: B:H.49
- Salt bridges: B:H.49
- pi-Stacking: B:H.177, B:H.177
- Metal complexes: B:H.177
CLA.69: 17 residues within 4Å:- Chain B: I.126, G.127, L.128, D.133, F.140, S.185, A.188, W.189, G.191, H.192, H.195, V.196, R.207, W.208
- Ligands: CLA.70, CLA.83, BCR.100
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:I.126, B:A.188, B:W.189, B:W.189, B:H.192, B:H.195, B:V.196, B:W.208, B:W.208
- Hydrogen bonds: B:W.208
- Salt bridges: B:R.207
- pi-Stacking: B:W.208
- pi-Cation interactions: B:H.192, B:H.192
- Metal complexes: B:H.192
CLA.70: 17 residues within 4Å:- Chain B: L.187, A.188, T.190, G.191, V.194, H.195, L.211, A.214, L.215, P.216, G.220, L.221, L.277
- Ligands: CLA.69, CLA.75, BCR.98, BCR.100
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:L.187, B:T.190, B:V.194, B:P.216, B:L.221, B:L.221, B:L.277
- Salt bridges: B:H.195
- pi-Stacking: B:H.195
- Metal complexes: B:H.195
CLA.71: 16 residues within 4Å:- Chain B: F.224, W.229, N.230, L.254, T.255, F.256, H.274, L.277, A.278, V.281, L.491
- Chain G: F.85, A.88, N.92
- Ligands: CLA.72, CLA.113
15 PLIP interactions:12 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:F.224, B:W.229, B:W.229, B:L.254, B:L.277, B:A.278, B:V.281, B:V.281, G:F.85, G:F.85
- Salt bridges: B:H.274
- pi-Stacking: B:H.274, B:H.274
- Metal complexes: B:H.274
- Hydrogen bonds: G:N.92
CLA.72: 13 residues within 4Å:- Chain B: T.255, F.256, L.267, D.271, H.274, H.275, A.278, I.279, H.350, L.354
- Ligands: CLA.71, CLA.73, CLA.81
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:F.256, B:F.256, B:F.256, B:F.256, B:L.267, B:D.271, B:H.274, B:A.278, B:I.279, B:L.354
- Hydrogen bonds: B:G.259
- pi-Stacking: B:H.275, B:H.275
- Metal complexes: B:H.275
CLA.73: 15 residues within 4Å:- Chain B: W.122, T.125, F.182, S.185, S.186, W.189, M.272, H.275, H.276, I.279, P.356, Y.357
- Ligands: CLA.68, CLA.72, CLA.83
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.189, B:W.189, B:P.356, B:P.356
- Salt bridges: B:H.276
- pi-Stacking: B:W.189, B:H.275, B:H.276
- Metal complexes: B:H.276
CLA.74: 12 residues within 4Å:- Chain B: L.174, L.178, F.283, A.286, M.289, Y.290, M.300, I.303
- Ligands: CLA.76, CLA.77, CLA.78, CLA.79
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:L.174, B:L.178, B:F.283, B:A.286
- Hydrogen bonds: B:Y.290
CLA.75: 14 residues within 4Å:- Chain B: N.175, H.176, S.179, V.184, H.288, Y.290, T.292, F.294, I.296
- Chain G: L.73
- Ligands: CLA.67, CLA.70, BCR.98, BCR.116
9 PLIP interactions:2 interactions with chain G, 7 interactions with chain B,- Hydrophobic interactions: G:L.73, G:L.73, B:V.184, B:F.294, B:F.294
- pi-Stacking: B:H.288, B:H.288
- pi-Cation interactions: B:H.288
- Metal complexes: B:H.288
CLA.76: 14 residues within 4Å:- Chain B: I.285, H.288, M.289, I.296, G.297, H.298
- Chain G: F.26, Q.27, N.30, V.31, Q.34
- Ligands: CLA.74, CLA.77, BCR.98
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:M.289, G:F.26
- Hydrogen bonds: B:G.297, G:Q.27
- Salt bridges: B:H.298
- pi-Stacking: B:H.298
- Metal complexes: B:H.298
CLA.77: 14 residues within 4Å:- Chain B: M.289, H.298, E.302, I.303, A.306, H.307
- Chain G: Q.34
- Ligands: CLA.74, CLA.76, CLA.78, CLA.96, BCR.98, BCR.101, CLA.155
2 PLIP interactions:1 interactions with chain G, 1 interactions with chain B,- Hydrogen bonds: G:Q.34
- pi-Stacking: B:H.307
CLA.78: 14 residues within 4Å:- Chain B: I.303, L.304, H.307, H.318, L.321, I.325, V.406, M.410
- Ligands: CLA.74, CLA.77, CLA.79, CLA.85, CLA.96, BCR.101
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.321, B:I.325, B:V.406, B:V.406
- Salt bridges: B:H.307
- pi-Stacking: B:H.318
- Metal complexes: B:H.318
CLA.79: 15 residues within 4Å:- Chain B: A.170, R.173, H.177, F.182, M.300, Y.322, I.325, N.326, L.335, A.336, S.339
- Ligands: CLA.60, CLA.74, CLA.78, CLA.81
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:A.170, B:Y.322, B:I.325, B:L.335, B:A.336
- Hydrogen bonds: B:R.173, B:H.177
- Salt bridges: B:H.177
CLA.80: 21 residues within 4Å:- Chain B: V.342, S.345, L.346, Q.349, Q.375, M.382, F.386, L.526, T.529, T.530, L.533, M.582, I.586
- Ligands: CLA.81, CLA.86, CLA.89, CLA.91, CLA.92, CLA.93, CLA.96, BCR.102
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:M.382, B:F.386, B:L.533, B:I.586
- Hydrogen bonds: B:S.345, B:Q.349, B:Q.375
CLA.81: 18 residues within 4Å:- Chain B: A.338, S.339, V.342, L.346, Q.349, H.350, S.353, L.507, F.508
- Ligands: CLA.72, CLA.79, CLA.80, CLA.85, CLA.89, CLA.91, CLA.93, BCR.101, BCR.102
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:A.338, B:V.342, B:V.342, B:L.507, B:F.508
- pi-Cation interactions: B:H.350
- Metal complexes: B:H.350
CLA.82: 17 residues within 4Å:- Chain B: W.59, N.63, Y.116, S.117, A.369, L.370, T.372, H.373, Y.376, I.377, F.380, I.717, A.721, I.725
- Ligands: CLA.61, CLA.63, CLA.83
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:A.369, B:L.370, B:T.372, B:H.373, B:Y.376, B:Y.376, B:Y.376, B:I.377, B:F.380, B:I.717, B:I.717
- pi-Stacking: B:H.373, B:H.373
CLA.83: 23 residues within 4Å:- Chain B: I.56, W.59, T.60, S.117, G.118, W.122, A.188, L.340, T.344, V.347, M.351, Y.357, L.370, H.373, H.374, I.377
- Ligands: CLA.61, CLA.68, CLA.69, CLA.73, CLA.82, BCR.99, BCR.100
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:I.56, B:W.122, B:A.188, B:L.340, B:V.347, B:L.370, B:I.377
- Hydrogen bonds: B:Y.357
- pi-Stacking: B:H.373, B:H.374, B:H.374
CLA.84: 16 residues within 4Å:- Chain B: A.25, H.28, D.29, L.333, L.337, F.380, G.384, H.388, I.391, R.395, Y.554, W.572, F.575
- Ligands: CLA.60, CLA.61, DGD.104
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:H.28, B:D.29, B:L.333, B:L.337, B:F.575, B:F.575
- Hydrogen bonds: B:H.28
- Salt bridges: B:R.395
- pi-Stacking: B:H.388
- Metal complexes: B:H.388
CLA.85: 13 residues within 4Å:- Chain B: R.313, L.314, V.406, R.409, M.410, H.413, H.420
- Ligands: CLA.78, CLA.81, CLA.86, CLA.93, CLA.96, BCR.101
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:V.406, B:H.420
- Salt bridges: B:R.409, B:H.413
- Metal complexes: B:H.413
CLA.86: 11 residues within 4Å:- Chain A: W.693, A.694, K.697
- Chain B: A.416, H.420, W.423
- Ligands: CLA.41, CLA.80, CLA.85, CLA.93, BCR.109
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A,- pi-Stacking: B:H.420, B:H.420
- Metal complexes: B:H.420
- Hydrophobic interactions: A:K.697
- Salt bridges: A:K.697
CLA.87: 14 residues within 4Å:- Chain B: W.423, L.426, F.427, F.430, H.431
- Chain F: F.83, G.87, F.90, A.94
- Ligands: CLA.41, BCR.52, BCR.56, CLA.88, BCR.120
9 PLIP interactions:3 interactions with chain F, 6 interactions with chain B,- Hydrophobic interactions: F:F.83, B:F.427, B:F.430
- pi-Stacking: F:F.90, F:F.90, B:F.427, B:H.431
- pi-Cation interactions: B:H.431
- Metal complexes: B:H.431
CLA.88: 18 residues within 4Å:- Chain A: V.111
- Chain B: G.434, V.437, H.438, V.441, M.442, K.450, I.452
- Chain J: N.30, D.35, A.36, L.37
- Ligands: CLA.10, BCR.52, CLA.54, CLA.87, BCR.119, BCR.120
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain J,- Hydrophobic interactions: B:V.441, J:A.36, J:L.37
- Hydrogen bonds: B:K.450, J:N.30, J:D.35, J:A.36
- Salt bridges: B:K.450
CLA.89: 9 residues within 4Å:- Chain B: W.461, I.462, H.466, L.476, W.496
- Ligands: CLA.80, CLA.81, CLA.90, BCR.102
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:W.461, B:L.476
- pi-Cation interactions: B:H.466, B:H.466
CLA.90: 9 residues within 4Å:- Chain B: L.476, P.483, A.484, A.487, L.491, W.492
- Ligands: CLA.89, BCR.102, CLA.113
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:L.476, B:L.476, B:A.484, B:A.487, B:W.492
CLA.91: 18 residues within 4Å:- Chain B: Q.349, Y.352, Y.371, A.459, I.462, Q.463, F.508, L.509, I.511, H.519, I.522, V.589, Y.592, W.593
- Ligands: CLA.80, CLA.81, CLA.92, CLA.93
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:I.462, B:I.511, B:I.522, B:V.589, B:V.589, B:Y.592, B:W.593
- Hydrogen bonds: B:Q.463
- pi-Stacking: B:H.519, B:H.519
CLA.92: 17 residues within 4Å:- Chain B: F.427, L.428, P.456, V.457, F.458, A.459, F.516, H.519, H.520, A.523, H.527
- Chain F: V.73, F.83
- Ligands: CLA.80, CLA.91, CLA.93, BCR.120
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain F,- Hydrophobic interactions: B:F.427, B:F.427, B:L.428, B:V.457, B:F.458, B:F.458, B:F.516, B:A.523, F:V.73, F:F.83
- Hydrogen bonds: B:F.458, B:A.459
- Salt bridges: B:H.519
- pi-Cation interactions: B:H.520
- Metal complexes: B:H.520
CLA.93: 12 residues within 4Å:- Chain B: I.417, L.421, L.526, H.527, T.530
- Ligands: CLA.80, CLA.81, CLA.85, CLA.86, CLA.91, CLA.92, CLA.96
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:I.417, B:L.421, B:L.421, B:T.530
CLA.94: 17 residues within 4Å:- Chain B: T.17, I.20, W.21, I.674, A.678, H.681, R.691, W.692, K.693, P.696, V.697
- Chain I: F.27, E.31
- Chain L: Y.96
- Ligands: CLA.43, PQN.97, BCR.132
10 PLIP interactions:9 interactions with chain B, 1 interactions with chain I,- Hydrophobic interactions: B:T.17, B:I.20, B:W.21, B:I.674, B:W.692, B:P.696, I:F.27
- Hydrogen bonds: B:R.691, B:K.693
- Salt bridges: B:K.693
CLA.95: 22 residues within 4Å:- Chain B: W.21, F.651, L.654, V.655, T.658, M.661, F.662, V.707, A.710, H.711
- Chain I: A.20, M.23, A.24
- Chain L: C.92, I.95
- Ligands: CLA.58, CLA.64, PQN.97, BCR.103, DGD.104, BCR.117, BCR.132
10 PLIP interactions:1 interactions with chain L, 8 interactions with chain B, 1 interactions with chain I,- Hydrophobic interactions: L:I.95, B:F.651, B:L.654, B:V.655, B:T.658, B:V.707, I:A.24
- Salt bridges: B:H.711
- pi-Stacking: B:H.711
- Metal complexes: B:H.711
CLA.96: 17 residues within 4Å:- Chain B: A.306, H.307, T.308, P.309, P.310, R.313
- Chain O: L.27, N.33, F.37
- Ligands: CLA.77, CLA.78, CLA.80, CLA.85, CLA.93, BCR.101, LHG.105, CLA.155
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain O,- Hydrophobic interactions: B:P.309, O:L.27
CLA.108: 16 residues within 4Å:- Chain A: T.35, W.39, V.692, H.695, V.700, P.702, P.706, R.707
- Chain F: Y.104, L.105, E.118, I.121
- Chain J: A.11
- Ligands: CLA.4, CLA.41, PQN.44
9 PLIP interactions:7 interactions with chain A, 1 interactions with chain F, 1 interactions with chain J,- Hydrophobic interactions: A:T.35, A:W.39, A:V.692, A:P.702, A:P.702, A:P.706, A:P.706, F:L.105
- Hydrogen bonds: J:A.11
CLA.110: 11 residues within 4Å:- Chain F: I.93, W.96, I.97, V.100, M.130
- Chain J: W.18, F.19, L.22
- Ligands: CLA.41, BCR.56, CLA.112
8 PLIP interactions:4 interactions with chain J, 4 interactions with chain F,- Hydrophobic interactions: J:F.19, J:L.22, F:W.96, F:W.96, F:I.97, F:V.100
- pi-Stacking: J:W.18, J:W.18
CLA.111: 9 residues within 4Å:- Chain B: F.458, W.461, F.473
- Chain F: D.74, G.75, D.76, Q.77
- Ligands: BCR.109, CLA.166
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain F,- Hydrophobic interactions: B:F.458, B:F.458, B:F.473
- Hydrogen bonds: F:Q.77
CLA.112: 4 residues within 4Å:- Chain F: L.127, S.131
- Chain N: W.111
- Ligands: CLA.110
2 PLIP interactions:2 interactions with chain F,- Hydrophobic interactions: F:L.127
- Hydrogen bonds: F:S.131
CLA.113: 9 residues within 4Å:- Chain G: T.89, N.92, Y.94, P.96
- Chain O: A.73, A.74
- Ligands: CLA.71, CLA.90, CHL.158
3 PLIP interactions:2 interactions with chain O, 1 interactions with chain G,- Hydrophobic interactions: O:A.73, O:A.74, G:P.96
CLA.114: 9 residues within 4Å:- Chain B: F.225
- Chain G: T.4, A.5, I.8, T.9, T.12, H.80, F.84
- Ligands: BCR.116
7 PLIP interactions:6 interactions with chain G, 1 interactions with chain B,- Hydrophobic interactions: G:I.8, G:F.84, B:F.225
- Hydrogen bonds: G:T.4, G:T.9, G:T.12
- Metal complexes: G:H.80
CLA.115: 11 residues within 4Å:- Chain G: L.16, R.20, F.21, T.61, N.62, D.63, P.64, F.67, T.68, I.69
- Ligands: BCR.116
9 PLIP interactions:9 interactions with chain G,- Hydrophobic interactions: G:L.16, G:R.20, G:F.21, G:P.64, G:F.67, G:F.67
- Hydrogen bonds: G:T.61
- pi-Cation interactions: G:R.20
- Metal complexes: G:D.63
CLA.118: 7 residues within 4Å:- Chain J: F.21, G.24, L.25, E.28, R.31, F.32
- Ligands: BCR.55
4 PLIP interactions:4 interactions with chain J,- Hydrophobic interactions: J:F.21, J:E.28, J:F.32
- Salt bridges: J:R.31
CLA.122: 10 residues within 4Å:- Chain K: L.18, F.19, R.22, F.23, D.50, F.54, T.55, A.56, T.59
- Ligands: BCR.127
7 PLIP interactions:7 interactions with chain K,- Hydrophobic interactions: K:F.19, K:R.22, K:R.22, K:F.23, K:F.23
- Salt bridges: K:D.50
- pi-Cation interactions: K:R.22
CLA.124: 7 residues within 4Å:- Chain K: V.68, G.72, I.73, G.76, A.79
- Ligands: CLA.18, CLA.37
3 PLIP interactions:3 interactions with chain K,- Hydrophobic interactions: K:V.68, K:I.73, K:A.79
CLA.125: 8 residues within 4Å:- Chain A: F.253, F.254
- Chain K: N.7, M.10, V.11, T.14, H.67
- Ligands: BCR.127
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain K,- Hydrophobic interactions: A:F.253, A:F.254, K:M.10, K:V.11
- pi-Stacking: K:H.67
CLA.126: 8 residues within 4Å:- Chain K: L.16, M.17, L.25, A.26, L.37, L.39, L.65
- Ligands: CLA.23
8 PLIP interactions:8 interactions with chain K,- Hydrophobic interactions: K:L.16, K:L.25, K:L.25, K:A.26, K:L.37, K:L.39, K:L.65
- Hydrogen bonds: K:L.37
CLA.129: 9 residues within 4Å:- Chain H: R.26, Y.27, Q.31
- Chain L: Y.30, N.33, R.38, E.49, L.52
- Ligands: CLA.130
4 PLIP interactions:2 interactions with chain L, 2 interactions with chain H,- Hydrophobic interactions: L:E.49, L:L.52, H:R.26, H:Y.27
CLA.130: 15 residues within 4Å:- Chain B: L.686
- Chain L: Y.30, L.34, P.35, A.36, E.49, I.50, H.54, L.57
- Ligands: CLA.35, CLA.43, BCR.128, CLA.129, CLA.131, BCR.132
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain L,- Hydrophobic interactions: B:L.686, L:A.36
- Hydrogen bonds: L:A.36
- pi-Stacking: L:H.54, L:H.54
CLA.131: 10 residues within 4Å:- Chain L: Y.56, L.57, G.60, P.61, L.64, L.152, Y.159
- Ligands: CLA.34, CLA.35, CLA.130
8 PLIP interactions:8 interactions with chain L,- Hydrophobic interactions: L:L.57, L:P.61, L:L.64, L:L.64, L:L.152, L:Y.159, L:Y.159
- Hydrogen bonds: L:Y.56
CLA.134: 17 residues within 4Å:- Chain N: L.20, P.25, G.26, D.27, F.28, G.29, F.30, D.31, L.35, F.45, V.46, E.49, R.170, M.173, L.174
- Ligands: CLA.135, XAT.150
13 PLIP interactions:13 interactions with chain N,- Hydrophobic interactions: N:F.30, N:F.45, N:V.46, N:E.49, N:R.170, N:L.174, N:L.174
- Hydrogen bonds: N:D.27, N:F.28, N:F.30
- Salt bridges: N:R.170
- pi-Cation interactions: N:R.170, N:R.170
CLA.135: 6 residues within 4Å:- Chain N: W.44, F.45, H.52
- Ligands: CLA.134, CLA.140, XAT.150
1 PLIP interactions:1 interactions with chain N,- Hydrophobic interactions: N:F.45
CLA.136: 13 residues within 4Å:- Chain N: A.61, G.62, I.65, P.66, L.75, T.77, P.78, A.83, Q.86, Y.88
- Ligands: CHL.137, XAT.150, BCR.151
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:A.61, N:I.65, N:L.75, N:A.83, N:Y.88
CLA.140: 9 residues within 4Å:- Chain N: W.44, A.48, H.52, L.100, F.103, E.107, R.110, W.111
- Ligands: CLA.135
10 PLIP interactions:10 interactions with chain N,- Hydrophobic interactions: N:W.44, N:L.100, N:F.103, N:W.111
- Salt bridges: N:R.110
- pi-Stacking: N:W.111
- pi-Cation interactions: N:R.110, N:R.110, N:R.110
- Metal complexes: N:E.107
CLA.141: 13 residues within 4Å:- Chain N: R.54, M.57, Y.138, P.139, G.140, F.144, D.145, W.149, G.150, L.161, E.165
- Ligands: CHL.139, LUT.149
7 PLIP interactions:7 interactions with chain N,- Hydrophobic interactions: N:P.139, N:F.144, N:W.149, N:L.161, N:E.165, N:E.165
- Hydrogen bonds: N:G.140
CLA.142: 7 residues within 4Å:- Chain N: K.164, K.167, N.168
- Chain P: L.130
- Ligands: CLA.143, LHG.152, BCR.186
5 PLIP interactions:3 interactions with chain N, 2 interactions with chain P,- Hydrophobic interactions: N:K.164, N:K.167, P:L.130, P:L.130
- pi-Cation interactions: N:K.167
CLA.143: 5 residues within 4Å:- Chain N: K.164, N.168, L.171
- Ligands: CLA.142, LUT.149
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:K.164, N:L.171
- Salt bridges: N:K.164
CLA.144: 12 residues within 4Å:- Chain N: L.174, G.178, V.181, Q.182, Y.185, T.186, N.193, H.197, T.205, I.206
- Ligands: CLA.145, LUT.149
6 PLIP interactions:6 interactions with chain N,- Hydrophobic interactions: N:L.174, N:V.181, N:Q.182, N:Y.185, N:I.206
- Hydrogen bonds: N:I.206
CLA.145: 11 residues within 4Å:- Chain N: L.194, H.197, L.198, P.201, T.205, I.206
- Chain P: T.98, V.101, L.102
- Ligands: CLA.144, LUT.149
8 PLIP interactions:5 interactions with chain N, 3 interactions with chain P,- Hydrophobic interactions: N:L.194, N:L.198, N:P.201, P:L.102, P:L.102
- Hydrogen bonds: N:T.205, P:T.98
- pi-Stacking: N:H.197
CLA.154: 19 residues within 4Å:- Chain O: L.12, P.17, G.18, D.19, F.20, G.21, F.22, L.27, G.28, L.34, F.37, K.38, E.41, R.149, L.152, V.153
- Ligands: CHL.153, CLA.155, XAT.168
15 PLIP interactions:15 interactions with chain O,- Hydrophobic interactions: O:L.12, O:F.20, O:F.22, O:L.34, O:F.37, O:K.38, O:E.41, O:L.152, O:L.152, O:V.153
- Hydrogen bonds: O:F.20, O:G.21, O:F.22
- Salt bridges: O:R.149
- pi-Cation interactions: O:R.149
CLA.155: 12 residues within 4Å:- Chain O: R.36, F.37, S.40, H.44, L.156
- Ligands: CLA.77, CLA.96, BCR.101, CLA.154, CHL.158, CLA.160, XAT.168
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:F.37, O:L.156
- Salt bridges: O:R.36, O:R.36
CLA.156: 10 residues within 4Å:- Chain O: L.50, A.51, G.54, I.57, P.58, A.69, T.81, Y.82
- Ligands: CLA.157, XAT.168
5 PLIP interactions:5 interactions with chain O,- Hydrophobic interactions: O:I.57, O:P.58, O:Y.82
- pi-Stacking: O:Y.82, O:Y.82
CLA.157: 11 residues within 4Å:- Chain O: W.72, V.87, W.89, I.95, I.98, E.99, A.102, I.103
- Ligands: CLA.156, CHL.158, XAT.168
6 PLIP interactions:6 interactions with chain O,- Hydrophobic interactions: O:W.72, O:I.95, O:I.95, O:E.99, O:A.102, O:I.103
CLA.159: 9 residues within 4Å:- Chain O: I.43, R.46, W.47, Q.109, R.110, R.119, P.122, F.126
- Ligands: CLA.161
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:R.110, O:P.122
- Hydrogen bonds: O:R.46
- pi-Cation interactions: O:R.110
CLA.160: 11 residues within 4Å:- Chain O: E.39, S.40, I.43, H.44, W.47, I.103, A.104, E.107, R.110, N.111
- Ligands: CLA.155
9 PLIP interactions:9 interactions with chain O,- Hydrophobic interactions: O:I.43, O:W.47, O:I.103, O:A.104, O:N.111
- Salt bridges: O:R.110
- pi-Cation interactions: O:R.110, O:R.110, O:R.110
CLA.161: 16 residues within 4Å:- Chain O: R.46, M.49, Y.121, P.122, G.123, F.126, D.127, F.131, S.132, L.140, K.141, E.144, N.147
- Ligands: CLA.159, CLA.163, LUT.167
15 PLIP interactions:15 interactions with chain O,- Hydrophobic interactions: O:R.46, O:R.46, O:M.49, O:P.122, O:F.126, O:F.131, O:L.140, O:K.141, O:N.147
- Hydrogen bonds: O:G.123, O:S.132
- Salt bridges: O:K.141
- pi-Cation interactions: O:R.46, O:R.46
- Metal complexes: O:E.144
CLA.162: 7 residues within 4Å:- Chain O: L.142, K.143, K.146, N.147
- Ligands: CLA.163, LHG.169, BCR.204
6 PLIP interactions:6 interactions with chain O,- Hydrophobic interactions: O:K.146, O:K.146
- Hydrogen bonds: O:N.147
- Salt bridges: O:K.146
- pi-Cation interactions: O:K.146, O:K.146
CLA.163: 6 residues within 4Å:- Chain O: K.143, N.147, L.150
- Ligands: CLA.161, CLA.162, LUT.167
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:L.150
- Salt bridges: O:K.143, O:K.143
CLA.164: 14 residues within 4Å:- Chain O: V.153, G.157, V.160, Q.161, Y.165, N.173, L.174, H.177, N.184, T.185, I.186, V.189
- Ligands: CLA.165, LUT.167
6 PLIP interactions:6 interactions with chain O,- Hydrophobic interactions: O:V.160, O:L.174, O:I.186, O:I.186, O:V.189
- Salt bridges: O:H.177
CLA.165: 9 residues within 4Å:- Chain O: H.177, L.178, P.181, W.182, T.185
- Chain Q: V.95, V.96
- Ligands: CLA.164, LUT.167
7 PLIP interactions:6 interactions with chain O, 1 interactions with chain Q,- Hydrophobic interactions: O:L.178, O:P.181, O:W.182, O:W.182, Q:V.96
- Hydrogen bonds: O:T.185
- pi-Cation interactions: O:H.177
CLA.166: 6 residues within 4Å:- Chain O: V.189, I.190, I.191, P.192
- Chain Q: F.94
- Ligands: CLA.111
6 PLIP interactions:5 interactions with chain O, 1 interactions with chain Q,- Hydrophobic interactions: O:I.190, O:I.190, O:I.191, O:P.192, Q:F.94
- Metal complexes: O:I.190
CLA.170: 18 residues within 4Å:- Chain P: L.10, G.16, D.17, Y.18, G.19, F.20, D.21, L.25, M.26, L.40, P.41, E.44, N.47, R.174, M.177, M.178
- Ligands: CLA.171, XAT.185
12 PLIP interactions:12 interactions with chain P,- Hydrophobic interactions: P:F.20, P:L.25, P:L.40, P:N.47, P:R.174, P:M.177
- Hydrogen bonds: P:Y.18, P:F.20
- Salt bridges: P:R.174
- pi-Cation interactions: P:R.174, P:R.174
- Metal complexes: P:E.44
CLA.171: 11 residues within 4Å:- Chain P: F.34, W.39, L.40, A.43, N.47, F.184
- Ligands: CLA.11, CLA.14, CLA.170, CLA.176, XAT.185
3 PLIP interactions:3 interactions with chain P,- Hydrophobic interactions: P:F.34, P:A.43, P:F.184
CLA.172: 12 residues within 4Å:- Chain P: L.53, G.57, A.60, P.61, L.64, E.73, Y.92
- Ligands: CLA.173, CLA.182, XAT.185, BCR.186, BCR.187
6 PLIP interactions:6 interactions with chain P,- Hydrophobic interactions: P:L.53, P:L.53, P:A.60, P:P.61, P:L.64, P:Y.92
CLA.173: 15 residues within 4Å:- Chain P: S.81, G.82, V.83, Y.92, W.93, L.99, L.102, E.103, L.106, M.107
- Ligands: CLA.172, CLA.174, CLA.176, XAT.185, BCR.186
5 PLIP interactions:5 interactions with chain P,- Hydrophobic interactions: P:V.83, P:Y.92, P:Y.92, P:L.99, P:L.106
CLA.174: 10 residues within 4Å:- Chain P: V.83, I.84, P.85, P.96, Y.97, F.100, E.103, F.184
- Ligands: CLA.173, XAT.185
8 PLIP interactions:8 interactions with chain P,- Hydrophobic interactions: P:P.96, P:Y.97, P:F.100, P:F.100, P:F.100, P:F.184
- Hydrogen bonds: P:E.103
- Metal complexes: P:V.83
CLA.176: 18 residues within 4Å:- Chain P: F.34, W.39, Y.42, A.43, I.46, N.47, F.50, E.103, M.104, M.107, G.108, E.111, H.112, R.114, A.115
- Ligands: CLA.171, CLA.173, CLA.183
6 PLIP interactions:6 interactions with chain P,- Hydrophobic interactions: P:W.39, P:F.50, P:F.50, P:A.115
- Salt bridges: P:R.114
- pi-Cation interactions: P:R.114
CLA.177: 15 residues within 4Å:- Chain P: R.49, M.52, L.53, Y.144, P.145, G.146, F.150, N.151, F.155, L.165, K.166, E.169
- Ligands: CHL.175, CLA.179, LUT.184
5 PLIP interactions:5 interactions with chain P,- Hydrophobic interactions: P:M.52, P:L.53, P:L.165, P:K.166
- Hydrogen bonds: P:G.146
CLA.178: 5 residues within 4Å:- Chain P: K.168, K.171, N.172, L.175
- Ligands: CLA.179
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:K.168
- Salt bridges: P:K.171
- pi-Cation interactions: P:K.171, P:K.171
CLA.179: 7 residues within 4Å:- Chain P: L.165, K.168, N.172, L.175
- Ligands: CLA.177, CLA.178, LUT.184
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:L.165, P:K.168, P:L.175
- Salt bridges: P:K.168
CLA.180: 12 residues within 4Å:- Chain P: M.178, G.182, T.185, Q.186, F.189, N.197, L.198, H.201, N.208, V.210
- Ligands: CLA.181, LUT.184
7 PLIP interactions:7 interactions with chain P,- Hydrophobic interactions: P:Q.186, P:F.189, P:L.198, P:V.210
- Hydrogen bonds: P:N.209, P:V.210
- Salt bridges: P:H.201
CLA.181: 4 residues within 4Å:- Chain P: H.201, P.205, N.209
- Ligands: CLA.180
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:P.205, P:P.205
- pi-Stacking: P:H.201
- pi-Cation interactions: P:H.201
CLA.182: 6 residues within 4Å:- Chain P: L.69, I.70, P.71, E.73, Y.92
- Ligands: CLA.172
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:L.69, P:I.70, P:P.71, P:Y.92
CLA.183: 5 residues within 4Å:- Chain N: W.10, F.11
- Chain P: H.112
- Ligands: CHL.133, CLA.176
3 PLIP interactions:1 interactions with chain N, 2 interactions with chain P,- Hydrophobic interactions: N:F.11
- pi-Stacking: P:H.112
- pi-Cation interactions: P:H.112
CLA.188: 16 residues within 4Å:- Chain N: A.104, W.105, G.108, R.109, A.112, P.124
- Chain Q: P.5, L.6, W.7, L.8, P.9, F.25, F.27
- Ligands: BCR.151, CLA.189, LHG.205
12 PLIP interactions:3 interactions with chain N, 9 interactions with chain Q,- Hydrophobic interactions: N:W.105, N:W.105, N:P.124, Q:P.5, Q:W.7, Q:W.7, Q:F.25, Q:F.25, Q:F.27, Q:F.27
- pi-Stacking: Q:W.7
- Metal complexes: Q:W.7
CLA.189: 19 residues within 4Å:- Chain Q: L.17, A.22, G.23, D.24, F.25, G.26, F.27, D.28, L.32, G.33, Y.42, V.43, E.46, H.49, R.168, M.171
- Ligands: CLA.188, XAT.203, LHG.205
12 PLIP interactions:12 interactions with chain Q,- Hydrophobic interactions: Q:F.27, Q:F.27, Q:Y.42, Q:E.46, Q:R.168, Q:M.171
- Hydrogen bonds: Q:F.25, Q:F.27, Q:G.33
- Salt bridges: Q:R.168
- pi-Stacking: Q:F.27
- pi-Cation interactions: Q:R.168
CLA.190: 5 residues within 4Å:- Chain Q: W.41, Y.42, H.49
- Ligands: CLA.195, XAT.203
1 PLIP interactions:1 interactions with chain Q,- pi-Stacking: Q:H.49
CLA.191: 10 residues within 4Å:- Chain Q: A.55, A.58, G.59, F.62, I.74, P.75, A.80
- Ligands: CHL.192, XAT.203, BCR.204
3 PLIP interactions:3 interactions with chain Q,- Hydrophobic interactions: Q:A.58, Q:F.62, Q:A.80
CLA.195: 12 residues within 4Å:- Chain Q: W.41, A.45, V.48, H.49, F.52, L.98, M.101, G.102, E.105, R.108, W.109
- Ligands: CLA.190
7 PLIP interactions:7 interactions with chain Q,- Hydrophobic interactions: Q:W.41, Q:V.48, Q:F.52, Q:W.109
- pi-Cation interactions: Q:R.108, Q:R.108
- Metal complexes: Q:E.105
CLA.196: 14 residues within 4Å:- Chain Q: R.51, M.54, L.134, Y.138, P.139, G.140, F.149, A.150, L.159, R.160, E.163
- Ligands: CHL.194, CLA.198, LUT.202
6 PLIP interactions:6 interactions with chain Q,- Hydrophobic interactions: Q:R.51, Q:M.54, Q:P.139, Q:A.150, Q:L.159, Q:R.160
CLA.197: 7 residues within 4Å:- Chain Q: W.161, K.162, K.165, N.166
- Ligands: BCR.151, CLA.198, LHG.205
3 PLIP interactions:3 interactions with chain Q,- Hydrogen bonds: Q:N.166
- Salt bridges: Q:K.165
- pi-Cation interactions: Q:K.165
CLA.198: 7 residues within 4Å:- Chain Q: L.159, K.162, N.166, L.169
- Ligands: CLA.196, CLA.197, LUT.202
4 PLIP interactions:4 interactions with chain Q,- Hydrophobic interactions: Q:K.162, Q:L.169
- Salt bridges: Q:K.162, Q:K.162
CLA.199: 14 residues within 4Å:- Chain Q: V.172, A.173, G.176, V.179, Q.180, V.183, T.184, N.191, L.192, H.195, T.203, I.204
- Ligands: CLA.200, LUT.202
4 PLIP interactions:4 interactions with chain Q,- Hydrophobic interactions: Q:V.179, Q:Q.180, Q:V.183, Q:I.204
CLA.200: 9 residues within 4Å:- Chain N: I.98, I.101
- Chain Q: H.195, L.196, P.199, V.200, T.203, I.204
- Ligands: CLA.199
9 PLIP interactions:6 interactions with chain Q, 3 interactions with chain N,- Hydrophobic interactions: Q:L.196, Q:P.199, Q:P.199, Q:V.200, N:I.98, N:I.98, N:I.101
- Hydrogen bonds: Q:T.203
- pi-Stacking: Q:H.195
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.44: 11 residues within 4Å:- Chain A: M.675, F.676, R.681, W.684, A.708, L.709, G.714
- Chain J: F.19
- Ligands: CLA.4, BCR.56, CLA.108
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain J- Hydrophobic interactions: A:F.676, A:F.676, A:W.684, A:W.684, A:L.709, A:L.709, J:F.19
- Hydrogen bonds: A:L.709
- pi-Stacking: A:W.684
PQN.97: 16 residues within 4Å:- Chain B: W.21, M.661, F.662, S.665, W.666, R.667, W.670, A.698, L.699, A.704
- Ligands: CLA.43, CLA.94, CLA.95, BCR.103, DGD.104, BCR.132
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:W.21, B:R.667, B:W.670, B:W.670, B:A.704
- Hydrogen bonds: B:L.699
- pi-Stacking: B:W.670
- 6 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
LHG.46: 20 residues within 4Å:- Chain A: W.39, N.40, H.42, A.43, D.44, F.389, R.562, W.579, S.710, V.712, Q.713, A.716, L.723, L.724, I.727
- Ligands: CLA.5, CLA.7, CLA.31, CLA.42, BCR.52
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:W.39, A:H.42, A:A.43, A:F.389, A:F.389, A:Q.713, A:L.723, A:I.727
- Hydrogen bonds: A:D.44, A:R.562, A:S.710
- Salt bridges: A:R.562, A:R.562
LHG.47: 11 residues within 4Å:- Chain A: K.319, G.320, P.321, F.322, T.323, H.327
- Ligands: CLA.25, CLA.27, CLA.32, CLA.45, BCR.50
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.320, A:G.320, A:F.322, A:T.323
LHG.105: 7 residues within 4Å:- Chain B: P.309, P.310, R.313
- Chain O: L.27, V.30, N.33
- Ligands: CLA.96
5 PLIP interactions:2 interactions with chain O, 3 interactions with chain B- Hydrogen bonds: O:L.27, O:N.33, B:P.310
- Salt bridges: B:R.313, B:R.313
LHG.152: 10 residues within 4Å:- Chain N: F.28, K.167, L.171, L.174
- Chain P: F.109, Y.128, L.130
- Ligands: CHL.133, CLA.142, BCR.186
5 PLIP interactions:4 interactions with chain N, 1 interactions with chain P- Hydrophobic interactions: N:L.171, N:L.174, P:F.109
- Salt bridges: N:K.167, N:K.167
LHG.169: 5 residues within 4Å:- Chain O: K.146, L.150
- Ligands: CHL.153, CLA.162, BCR.204
2 PLIP interactions:2 interactions with chain O- Salt bridges: O:K.146, O:K.146
LHG.205: 9 residues within 4Å:- Chain N: P.124
- Chain Q: K.165, R.168, L.169
- Ligands: BCR.151, CLA.188, CLA.189, CLA.197, XAT.203
3 PLIP interactions:1 interactions with chain N, 2 interactions with chain Q- Hydrogen bonds: N:P.124, Q:L.169
- Salt bridges: Q:K.165
- 26 x BCR: BETA-CAROTENE(Non-covalent)(Covalent)
BCR.48: 12 residues within 4Å:- Chain A: T.151, G.154, G.155, F.158, L.197, A.201
- Ligands: CLA.6, CLA.15, CLA.16, CLA.17, BCR.49, BCR.123
Ligand excluded by PLIPBCR.49: 9 residues within 4Å:- Chain A: L.197, G.198
- Ligands: CLA.6, CLA.7, CLA.14, CLA.15, CLA.20, CLA.30, BCR.48
Ligand excluded by PLIPBCR.50: 11 residues within 4Å:- Chain A: L.334, A.340, I.344, A.398, F.401
- Ligands: CLA.25, CLA.26, CLA.27, CLA.45, LHG.47, BCR.51
Ligand excluded by PLIPBCR.51: 10 residues within 4Å:- Chain A: A.347, S.351, V.537, L.540, L.541
- Ligands: CLA.27, CLA.28, CLA.36, CLA.37, BCR.50
Ligand excluded by PLIPBCR.52: 15 residues within 4Å:- Chain A: G.665, F.668, V.669, I.727, W.731
- Chain B: L.433
- Ligands: CLA.29, CLA.31, CLA.42, LHG.46, CLA.54, BCR.56, CLA.87, CLA.88, BCR.119
Ligand excluded by PLIPBCR.55: 12 residues within 4Å:- Chain A: W.108
- Chain J: Y.7, P.12, T.16, G.20, I.27, E.28, R.31
- Ligands: CLA.4, CLA.10, CLA.118, BCR.119
Ligand excluded by PLIPBCR.56: 12 residues within 4Å:- Chain B: L.426, F.430
- Chain F: V.89, F.90, I.93
- Ligands: CLA.41, CLA.42, PQN.44, BCR.52, CLA.87, CLA.110, BCR.120
Ligand excluded by PLIPBCR.98: 13 residues within 4Å:- Chain B: L.187, I.284, H.288
- Chain G: A.74, W.75, A.77, L.78
- Ligands: CLA.70, CLA.75, CLA.76, CLA.77, BCR.100, BCR.116
Ligand excluded by PLIPBCR.99: 12 residues within 4Å:- Chain B: L.53, I.56, F.57, F.148, L.181, V.184, S.185
- Ligands: CLA.60, CLA.61, CLA.67, CLA.68, CLA.83
Ligand excluded by PLIPBCR.100: 7 residues within 4Å:- Chain B: L.64, G.137, F.140
- Ligands: CLA.69, CLA.70, CLA.83, BCR.98
Ligand excluded by PLIPBCR.101: 8 residues within 4Å:- Chain B: M.410
- Ligands: CLA.77, CLA.78, CLA.81, CLA.85, CLA.96, BCR.102, CLA.155
Ligand excluded by PLIPBCR.102: 15 residues within 4Å:- Chain B: F.331, G.334, L.335, A.338, V.342, M.382, A.385, G.389, F.392, F.393
- Ligands: CLA.80, CLA.81, CLA.89, CLA.90, BCR.101
Ligand excluded by PLIPBCR.103: 12 residues within 4Å:- Chain B: W.647, F.651, I.674, L.677
- Ligands: CLA.3, CLA.34, CLA.43, CLA.58, CLA.63, CLA.64, CLA.95, PQN.97
Ligand excluded by PLIPBCR.109: 7 residues within 4Å:- Chain A: L.698
- Chain F: G.95, G.98, W.99, W.136
- Ligands: CLA.86, CLA.111
Ligand excluded by PLIPBCR.116: 9 residues within 4Å:- Chain G: L.73, G.76, A.77, H.80, F.84
- Ligands: CLA.75, BCR.98, CLA.114, CLA.115
Ligand excluded by PLIPBCR.117: 14 residues within 4Å:- Chain I: I.14, G.15, L.16, F.18, P.19
- Ligands: CLA.3, CLA.34, CLA.35, CLA.62, CLA.63, CLA.64, CLA.65, CLA.95, BCR.128
Ligand excluded by PLIPBCR.119: 14 residues within 4Å:- Chain J: A.23, L.26, N.30
- Ligands: CLA.4, CLA.7, CLA.8, CLA.9, CLA.10, CLA.12, CLA.29, BCR.52, CLA.54, BCR.55, CLA.88
Ligand excluded by PLIPBCR.120: 22 residues within 4Å:- Chain B: F.427, H.431, L.435, I.452, I.454, F.516
- Chain F: F.55, L.71, E.82, F.83, P.86
- Chain J: F.33, P.34, A.36, L.37, V.38, L.39, P.40
- Ligands: BCR.56, CLA.87, CLA.88, CLA.92
Ligand excluded by PLIPBCR.123: 15 residues within 4Å:- Chain A: L.200, L.250, F.253, V.292, L.295, H.299
- Chain K: P.27, A.61, A.64, L.65
- Ligands: CLA.16, CLA.21, CLA.23, BCR.48, BCR.127
Ligand excluded by PLIPBCR.127: 9 residues within 4Å:- Chain K: L.60, G.63, A.64, H.67, V.68, V.71
- Ligands: CLA.122, BCR.123, CLA.125
Ligand excluded by PLIPBCR.128: 11 residues within 4Å:- Chain B: A.687
- Chain I: L.16
- Chain L: A.81
- Ligands: CLA.33, CLA.34, CLA.35, CLA.39, CLA.43, CLA.65, BCR.117, CLA.130
Ligand excluded by PLIPBCR.132: 19 residues within 4Å:- Chain B: I.24, V.690
- Chain I: M.23, L.26, I.30
- Chain L: H.54, L.89, C.92, L.93, I.95, W.137
- Ligands: CLA.34, CLA.43, CLA.59, CLA.64, CLA.94, CLA.95, PQN.97, CLA.130
Ligand excluded by PLIPBCR.151: 12 residues within 4Å:- Chain N: W.55, L.102, F.103, W.105, V.125
- Ligands: CLA.136, CHL.137, CHL.139, CHL.146, CLA.188, CLA.197, LHG.205
Ligand excluded by PLIPBCR.186: 12 residues within 4Å:- Chain P: L.106, M.107, F.109, A.110, L.130
- Ligands: CHL.133, CLA.142, LHG.152, CLA.172, CLA.173, CHL.175, BCR.187
Ligand excluded by PLIPBCR.187: 9 residues within 4Å:- Chain P: L.53, A.56, V.63, I.149, F.150
- Ligands: CLA.172, CHL.175, LUT.184, BCR.186
Ligand excluded by PLIPBCR.204: 9 residues within 4Å:- Chain Q: L.100, F.103, V.104
- Ligands: CLA.162, LHG.169, CLA.191, CHL.192, CHL.194, CHL.201
Ligand excluded by PLIP- 3 x SF4: IRON/SULFUR CLUSTER(Covalent)
SF4.53: 9 residues within 4Å:- Chain A: C.565, G.567, P.568, C.574, I.711
- Chain B: C.558, C.567, W.666, I.701
6 PLIP interactions:3 interactions with chain A, 3 interactions with chain B,- Metal complexes: A:C.565, A:C.574, A:C.574, B:C.558, B:C.567, B:C.567
SF4.106: 11 residues within 4Å:- Chain C: C.20, P.21, T.22, L.25, C.47, G.49, C.50, K.51, R.52, C.53, V.66
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.20, C:C.47, C:C.50, C:C.53
SF4.107: 11 residues within 4Å:- Chain C: C.10, I.11, G.12, C.13, T.14, Q.15, C.16, M.27, C.57, S.63, V.64
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.10, C:C.13, C:C.16, C:C.57
- 1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.104: 19 residues within 4Å:- Chain B: S.8, L.11, W.21, F.22, A.25, T.26, S.32, F.380, S.555, Q.703, L.706, L.709, S.713
- Chain C: G.69
- Ligands: CLA.59, CLA.61, CLA.84, CLA.95, PQN.97
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:W.21, B:A.25, B:F.380, B:Q.703, B:L.706, B:L.709
- Hydrogen bonds: B:G.10, B:T.26, B:S.32, B:S.555, B:S.555
- 3 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.121: 9 residues within 4Å:- Chain F: I.120, I.121, D.122, V.123, L.127
- Chain J: K.5, T.6, S.9
- Ligands: LMG.147
7 PLIP interactions:3 interactions with chain F, 4 interactions with chain J- Hydrophobic interactions: F:V.123, F:V.123, F:L.127
- Hydrogen bonds: J:K.5, J:K.5, J:T.6, J:S.9
LMG.147: 4 residues within 4Å:- Chain F: P.124
- Chain N: E.40
- Ligands: LMG.121, LMG.148
1 PLIP interactions:1 interactions with chain N- Hydrogen bonds: N:E.40
LMG.148: 4 residues within 4Å:- Chain N: E.40, W.44, W.111
- Ligands: LMG.147
2 PLIP interactions:2 interactions with chain N- Hydrogen bonds: N:E.40, N:E.40
- 12 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
CHL.133: 18 residues within 4Å:- Chain N: P.8, L.9, W.10, F.11, P.12, F.28, F.30
- Chain P: G.108, F.109, H.112, R.113, M.124, Q.127, F.129, L.130
- Ligands: LHG.152, CLA.183, BCR.186
12 PLIP interactions:8 interactions with chain N, 4 interactions with chain P,- Hydrophobic interactions: N:P.8, N:W.10, N:F.11, N:P.12, N:F.28, N:F.28, N:F.30, P:F.109, P:L.130
- Metal complexes: N:W.10
- Salt bridges: P:H.112, P:H.112
CHL.137: 12 residues within 4Å:- Chain N: W.55, A.83, G.84, Y.88, F.89, L.95, E.99, F.103
- Ligands: CLA.136, CHL.138, XAT.150, BCR.151
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:W.55, N:Y.88, N:Y.88, N:L.95, N:F.103
CHL.138: 9 residues within 4Å:- Chain N: N.81, V.82, G.84, D.85, P.92, F.96, E.99
- Ligands: CHL.137, XAT.150
2 PLIP interactions:2 interactions with chain N,- Hydrophobic interactions: N:P.92
- Hydrogen bonds: N:G.84
CHL.139: 14 residues within 4Å:- Chain N: R.54, W.55, W.105, A.106, R.109, R.110, D.113, G.137, P.139, W.143, F.144
- Ligands: CLA.141, CHL.146, BCR.151
6 PLIP interactions:6 interactions with chain N,- Hydrophobic interactions: N:R.110, N:D.113, N:P.139, N:W.143, N:F.144
- Hydrogen bonds: N:R.54
CHL.146: 14 residues within 4Å:- Chain N: W.105, R.109, N.121, D.123, P.124, V.125, F.126, N.128, N.129, L.131, L.142, W.143
- Ligands: CHL.139, BCR.151
15 PLIP interactions:15 interactions with chain N,- Hydrophobic interactions: N:V.125, N:F.126, N:F.126, N:N.129, N:L.131, N:L.131, N:L.131, N:L.142, N:W.143, N:W.143
- Hydrogen bonds: N:N.128, N:N.129
- pi-Stacking: N:W.143, N:W.143, N:W.143
CHL.153: 12 residues within 4Å:- Chain O: E.1, W.2, L.3, P.4, F.20, F.22
- Chain Q: F.103, T.106, K.107, E.121
- Ligands: CLA.154, LHG.169
14 PLIP interactions:8 interactions with chain Q, 6 interactions with chain O,- Hydrophobic interactions: Q:F.103, Q:F.103, Q:T.106, Q:E.121, O:W.2, O:W.2, O:P.4, O:F.22
- Hydrogen bonds: Q:T.106, Q:T.106, Q:K.107
- Salt bridges: Q:K.107
- pi-Stacking: O:W.2
- Metal complexes: O:W.2
CHL.158: 11 residues within 4Å:- Chain G: F.98
- Chain O: V.67, Q.70, A.73, L.96, E.99, F.155
- Ligands: CLA.113, CLA.155, CLA.157, XAT.168
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:A.73, O:L.96, O:F.155
- Salt bridges: O:K.71
CHL.175: 15 residues within 4Å:- Chain P: Y.42, R.49, F.50, A.110, R.113, R.114, D.117, F.129, L.136, P.142, P.145, F.150
- Ligands: CLA.177, BCR.186, BCR.187
11 PLIP interactions:11 interactions with chain P,- Hydrophobic interactions: P:A.110, P:R.113, P:R.114, P:D.117, P:F.129, P:L.136, P:L.136, P:P.145, P:P.145, P:F.150
- pi-Cation interactions: P:R.114
CHL.192: 7 residues within 4Å:- Chain Q: G.81, L.93, V.96, Q.97
- Ligands: CLA.191, CHL.193, BCR.204
3 PLIP interactions:3 interactions with chain Q,- Hydrophobic interactions: Q:L.93, Q:L.93, Q:Q.97
CHL.193: 8 residues within 4Å:- Chain Q: G.81, A.82, T.83, T.90, F.94, Q.97
- Ligands: CHL.192, XAT.203
2 PLIP interactions:2 interactions with chain Q,- Hydrophobic interactions: Q:F.94
- Hydrogen bonds: Q:Q.97
CHL.194: 15 residues within 4Å:- Chain Q: R.51, F.52, V.104, K.107, R.108, D.111, S.117, E.132, G.137, P.139, F.144
- Ligands: CLA.196, CHL.201, LUT.202, BCR.204
8 PLIP interactions:8 interactions with chain Q,- Hydrophobic interactions: Q:V.104, Q:V.104, Q:K.107, Q:D.111, Q:F.144, Q:F.144
- Hydrogen bonds: Q:R.51
- pi-Cation interactions: Q:R.108
CHL.201: 12 residues within 4Å:- Chain Q: F.103, K.107, Q.118, A.120, E.121, D.122, F.124, E.128, A.130, L.143
- Ligands: CHL.194, BCR.204
6 PLIP interactions:6 interactions with chain Q,- Hydrophobic interactions: Q:F.103, Q:A.120, Q:F.124, Q:E.128, Q:A.130, Q:L.143
- 4 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)(Covalent)
LUT.149: 17 residues within 4Å:- Chain N: M.57, F.64, F.144, D.145, P.146, L.147, N.168, A.172, A.175, Q.182, P.190, N.193, L.194
- Ligands: CLA.141, CLA.143, CLA.144, CLA.145
11 PLIP interactions:11 interactions with chain N- Hydrophobic interactions: N:M.57, N:F.64, N:F.64, N:F.64, N:F.64, N:A.172, N:A.175
- Hydrogen bonds: N:D.145, N:L.147, N:Q.182, N:L.194
LUT.167: 18 residues within 4Å:- Chain O: M.49, V.52, F.126, D.127, P.128, L.129, F.131, L.150, A.151, A.154, F.158, Q.161, P.170, L.174
- Ligands: CLA.161, CLA.163, CLA.164, CLA.165
12 PLIP interactions:12 interactions with chain O- Hydrophobic interactions: O:M.49, O:V.52, O:L.129, O:F.131, O:L.150, O:L.150, O:A.151, O:A.154, O:F.158
- Hydrogen bonds: O:D.127, O:L.129, O:Q.161
LUT.184: 17 residues within 4Å:- Chain P: M.52, F.150, N.151, F.152, L.153, G.154, F.155, L.175, A.176, A.179, Y.183, Q.186, P.194
- Ligands: CLA.177, CLA.179, CLA.180, BCR.187
13 PLIP interactions:13 interactions with chain P- Hydrophobic interactions: P:M.52, P:L.153, P:L.175, P:L.175, P:L.175, P:A.176, P:A.179, P:Y.183
- Hydrogen bonds: P:F.152, P:G.154, P:F.155, P:Q.186, P:P.194
LUT.202: 21 residues within 4Å:- Chain Q: M.54, V.57, A.58, L.61, F.144, N.145, P.146, L.147, G.148, F.149, N.166, L.169, A.170, A.173, F.177, Q.180, P.188
- Ligands: CHL.194, CLA.196, CLA.198, CLA.199
16 PLIP interactions:16 interactions with chain Q- Hydrophobic interactions: Q:M.54, Q:V.57, Q:A.58, Q:L.61, Q:L.61, Q:L.147, Q:F.149, Q:L.169, Q:A.170, Q:A.173, Q:F.177
- Hydrogen bonds: Q:L.147, Q:G.148, Q:F.149, Q:Q.180, Q:P.188
- 4 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.150: 19 residues within 4Å:- Chain N: F.30, D.31, P.32, L.33, H.52, W.55, A.56, G.59, I.63, W.80, A.83, M.173, V.176, L.177
- Ligands: CLA.134, CLA.135, CLA.136, CHL.137, CHL.138
10 PLIP interactions:10 interactions with chain N- Hydrophobic interactions: N:F.30, N:A.56, N:I.63, N:W.80, N:W.80, N:M.173, N:L.177
- Hydrogen bonds: N:D.31, N:L.33, N:W.80
XAT.168: 17 residues within 4Å:- Chain O: F.22, D.23, P.24, L.25, L.27, H.44, A.51, W.66, Q.70, L.152, F.155, L.156
- Ligands: CLA.154, CLA.155, CLA.156, CLA.157, CHL.158
11 PLIP interactions:11 interactions with chain O- Hydrophobic interactions: O:F.22, O:L.25, O:A.51, O:W.66, O:L.152, O:F.155, O:L.156
- Hydrogen bonds: O:D.23, O:L.25, O:W.66, O:Q.70
XAT.185: 18 residues within 4Å:- Chain P: F.20, D.21, P.22, L.23, N.47, F.50, A.51, G.54, W.78, V.83, M.177, V.180, L.181
- Ligands: CLA.170, CLA.171, CLA.172, CLA.173, CLA.174
11 PLIP interactions:11 interactions with chain P- Hydrophobic interactions: P:L.23, P:A.51, P:V.83, P:M.177, P:V.180, P:V.180, P:L.181
- Hydrogen bonds: P:D.21, P:L.23, P:W.78, P:S.81
XAT.203: 19 residues within 4Å:- Chain Q: F.27, D.28, P.29, L.30, L.32, H.49, F.52, A.53, G.56, I.60, W.77, M.171, M.174, V.175
- Ligands: CLA.189, CLA.190, CLA.191, CHL.193, LHG.205
8 PLIP interactions:8 interactions with chain Q- Hydrophobic interactions: Q:L.32, Q:A.53, Q:W.77, Q:M.171, Q:M.174
- Hydrogen bonds: Q:D.28, Q:L.30, Q:W.77
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yan, Q. et al., Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens. Cell Discov (2021)
- Release Date
- 2021-02-10
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Predicted protein PsaD: D
PsaE: E
PSI-F: F
Predicted protein PsaG: G
PsaH photosystem I reaction center subunit: H
Photosystem I reaction center subunit VIII: I
Photosystem I reaction center subunit IX: J
PsaK: K
PSI subunit V: L
Photosystem I reaction center subunit XII: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein, chloroplastic: O
Chlorophyll a-b binding protein, chloroplastic: P
Chlorophyll a-b binding protein, chloroplastic: Q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
2O
6P
3Q
5 - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 3.23 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 144 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 6 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
- 26 x BCR: BETA-CAROTENE(Non-covalent)(Covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Covalent)
- 1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 3 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 12 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
- 4 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)(Covalent)
- 4 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yan, Q. et al., Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens. Cell Discov (2021)
- Release Date
- 2021-02-10
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Predicted protein PsaD: D
PsaE: E
PSI-F: F
Predicted protein PsaG: G
PsaH photosystem I reaction center subunit: H
Photosystem I reaction center subunit VIII: I
Photosystem I reaction center subunit IX: J
PsaK: K
PSI subunit V: L
Photosystem I reaction center subunit XII: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein, chloroplastic: O
Chlorophyll a-b binding protein, chloroplastic: P
Chlorophyll a-b binding protein, chloroplastic: Q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
2O
6P
3Q
5 - Membrane
-
We predict this structure to be a membrane protein.