SMTL ID : 8htu.1

Cryo-EM structure of PpPSI-L

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-2-2-2-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
49 x CHL: CHLOROPHYLL B(Non-covalent)
221 x CLA: CHLOROPHYLL A(Non-covalent)
17 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
11 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
4 x NEX: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL(Non-covalent)
15 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
33 x BCR: BETA-CAROTENE(Non-covalent)
6 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
2 x PQN: PHYLLOQUINONE(Non-covalent)
3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
4 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Sun, H. et al., Structural insights into the assembly and energy transfer of the Lhcb9-dependent photosystem I from moss Physcomitrium patens. Nat.Plants (2023)
Release Date
2023-08-02
Peptides
Chlorophyll a-b binding protein, chloroplastic: ABC
Chlorophyll a-b binding protein, chloroplastic: DV
Chlorophyll a-b binding protein, chloroplastic: EW
Chlorophyll a-b binding protein, chloroplastic: FX
Chlorophyll a-b binding protein, chloroplastic: GY
Photosystem I P700 chlorophyll a apoprotein A1: H
Photosystem I P700 chlorophyll a apoprotein A2: I
Photosystem I iron-sulfur center: J
Photosystem I reaction center subunit II, chloroplastic: K
Photosystem I reaction center subunit IV, chloroplastic: L
Photosystem I reaction center subunit III: M
Photosystem I reaction center subunit V, chloroplastic: N
Photosystem I reaction center subunit VI, chloroplastic: O
Photosystem I reaction center subunit VIII: P
Photosystem I reaction center subunit IX: Q
Photosystem I subunit X: R
PSI subunit V: S
Photosystem I reaction center subunit XII: T
Photosystem I subunit O: U
Chlorophyll a-b binding protein, chloroplastic: Z
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
U
B
V
C
W
D
1
V
5
E
2
W
6
F
3
X
7
G
4
Y
8
H
A
I
B
J
C
K
D
L
E
M
F
N
G
O
H
P
I
Q
J
R
K
S
L
T
M
U
O
Z
9
Membrane
We predict this structure to be a membrane protein.

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein, chloroplastic

Photosystem I P700 chlorophyll a apoprotein A1

Photosystem I P700 chlorophyll a apoprotein A2

Photosystem I iron-sulfur center

Photosystem I reaction center subunit II, chloroplastic

Photosystem I reaction center subunit IV, chloroplastic

Photosystem I reaction center subunit III

Photosystem I reaction center subunit V, chloroplastic

Photosystem I reaction center subunit VI, chloroplastic

Photosystem I reaction center subunit VIII

Photosystem I reaction center subunit IX

Photosystem I subunit X

PSI subunit V

Photosystem I reaction center subunit XII

Photosystem I subunit O

Chlorophyll a-b binding protein, chloroplastic

Related Entries With Identical Sequence

6l35.1 | 7ksq.1 | 7kux.1 | 7xqp.1