SMTL ID : 6mg2.1

C-terminal bZIP domain of human C/EBPbeta with 16bp Methylated Oligonucleotide Containing Consensus Recognition Sequence-C2221 Crystal Form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: R.23, D.24, K.27 Chain C: G.7, C.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.24 EDO.2: 3 residues within 4Å: Chain D: A.11, A.12, T.13 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, J. et al., Structural basis for effects of CpA modifications on C/EBP beta binding of DNA. Nucleic Acids Res. (2019)

Release Date

2018-12-12

Peptides

CCAAT/enhancer-binding protein beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CCAAT/enhancer-binding protein beta

Related Entries With Identical Sequence