SMTL ID : 6o49.1 (1 other biounit)

CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x LL7: (2~{S})-~{N}-[3-oxidanylidene-3-[(3,4,5-trimethoxyphenyl)amino]propyl]-1-(phenylmethyl)sulfonyl-piperidine-2-carboxamide(Non-covalent)

LL7.1: 13 residues within 4Å: Chain A: Y.129, F.139, D.140, F.149, M.157, V.158, I.159, W.162, Y.185, A.190, G.191, I.194, F.202 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.129, A:D.140, A:F.149, A:W.162, A:W.162, A:A.190, A:I.194 Hydrogen bonds: A:Y.129, A:D.140, A:I.159, A:Y.185, A:G.191 pi-Stacking: A:F.139 pi-Cation interactions: A:W.162, A:W.162

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 2 residues within 4Å: Chain A: D.147, P.148 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.147, A:D.147, A:P.148, H2O.4

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: G.154, D.163, E.164, Q.167 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.163 Water bridges: A:E.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iwasaki, J. et al., CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339. to be published

Release Date

2020-02-12

Peptides

Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase

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