SMTL ID : 6oau.1 (1 other biounit)

Apo Structure of WT Lipoprotein Lipase in Complex with GPIHBP1 Mutant N78D N82D produced in GnTI-deficient HEK293-F cells

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.48 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: G.324, T.325, E.326, S.327, T.358, N.359 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:T.358 Hydrogen bonds: A:G.324, A:T.325, A:N.359 NAG.2: 4 residues within 4Å: Chain A: N.43, S.45, S.46, D.78 No protein-ligand interaction detected (PLIP)

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.3: 8 residues within 4Å: Chain A: E.11, S.12, K.13, D.85, W.86, L.87, S.88, R.89 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.12, A:L.87, A:S.88, A:R.89 Salt bridges: A:K.13, A:R.89

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: A.167, R.170, S.172, D.175 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:A.167, A:R.170, A:D.175, A:D.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arora, R. et al., Structure of lipoprotein lipase in complex with GPIHBP1. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-05-08

Peptides

Lipoprotein lipase: A
Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Lipoprotein lipase

Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1

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