SMTL ID : 6oba.1

The beta2 adrenergic receptor bound to a negative allosteric modulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 9 residues within 4Å: Chain A: T.80, S.81, C.84, V.88, L.122, R.158, I.161, W.165 Ligands: CLR.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.80, A:V.88, A:L.122, A:W.165, A:W.165, A:W.165 CLR.2: 6 residues within 4Å: Chain A: I.62, C.84, V.88, L.91, A.92 Ligands: CLR.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.62, A:L.91, A:A.92

1 x JTZ: (2S)-1-[(1-methylethyl)amino]-3-(2-prop-2-en-1-ylphenoxy)propan-2-ol(Non-covalent)

JTZ.3: 15 residues within 4Å: Chain A: W.116, T.117, D.120, V.121, V.124, T.125, A.207, S.210, S.211, W.421, F.424, F.425, Y.443, N.447, Y.451 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.116, A:T.117, A:V.121, A:V.124, A:F.425 Hydrogen bonds: A:Y.443, A:N.447, A:Y.451, A:Y.451 pi-Stacking: A:F.425

1 x M3J: 6-bromo-N~2~-phenylquinazoline-2,4-diamine(Non-covalent)

M3J.4: 7 residues within 4Å: Chain A: E.129, C.132, V.136, V.213, V.217, P.218, I.221 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.136, A:V.217, A:I.221 Hydrogen bonds: A:E.129, A:V.213

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, X. et al., An allosteric modulator binds to a conformational hub in the beta2adrenergic receptor. Nat.Chem.Biol. (2020)

Release Date

2020-03-25

Peptides

Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor

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