SMTL ID : 6oko.1

Crystal structure of mRIPK3 complexed with N-(3-fluoro-4-{1H-pyrrolo[2,3-b]pyridin-4-yloxy}phenyl)-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x 1FN: 1-(4-fluorophenyl)-N-[3-fluoro-4-(1H-pyrrolo[2,3-b]pyridin-4-yloxy)phenyl]-2-oxo-1,2-dihydropyridine-3-carboxamide(Non-covalent)

1FN.1: 23 residues within 4Å: Chain A: V.28, V.36, A.49, K.51, E.61, A.64, M.65, L.68, V.73, L.74, L.93, T.95, R.96, F.97, M.98, L.132, L.139, H.141, L.150, L.159, A.160, D.161, F.162 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.28, A:A.49, A:K.51, A:M.65, A:L.68, A:V.73, A:L.74, A:L.93, A:L.150, A:A.160, A:D.161, A:F.162 Hydrogen bonds: A:K.51, A:E.61, A:M.98, A:M.98, A:D.161 Water bridges: A:G.101 1FN.2: 22 residues within 4Å: Chain B: V.28, V.36, A.49, K.51, E.61, A.64, M.65, L.68, V.73, L.74, L.93, T.95, R.96, F.97, M.98, L.132, H.141, L.150, L.159, A.160, D.161, F.162 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:V.28, B:A.49, B:M.65, B:L.68, B:V.73, B:L.93, B:L.150, B:A.160, B:D.161, B:F.162, B:F.162 Hydrogen bonds: B:K.51, B:M.98, B:M.98, B:D.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hart, A.C. et al., Identification of RIPK3 Type II Inhibitors Using High-Throughput Mechanistic Studies in Hit Triage. Acs Med.Chem.Lett. (2020)

Release Date

2019-07-17

Peptides

Receptor-interacting serine/threonine-protein kinase 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 3

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