SMTL ID : 6oui.1

Carbonic Anhydrase IX mimic complexed with benzene sulfonamide MB11-710A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.91, H.93, E.103, H.116, T.195 Ligands: N7D.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.91, A:H.93, A:H.116

2 x N7D: 3-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide(Non-covalent)

N7D.2: 18 residues within 4Å: Chain A: W.2, N.59, H.61, Q.89, H.91, H.93, H.116, V.118, V.139, S.193, L.194, T.195, T.196, P.197, P.198, W.205 Ligands: ZN.1, GOL.6 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.2, A:V.118, A:V.118, A:L.194 Hydrogen bonds: A:T.195, A:T.195, A:T.196, A:P.197, A:P.197 Water bridges: A:Q.89 N7D.3: 8 residues within 4Å: Chain A: H.1, W.2, H.7, N.8, H.12, W.13, D.16, F.17 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:N.8, A:H.12 Hydrogen bonds: A:H.1, A:H.7, A:D.16, A:D.16

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 8 residues within 4Å: Chain A: D.98, G.99, K.109, K.110, Y.111, A.112, K.145, V.146 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.99, A:K.109, A:A.112, A:V.146 GOL.5: 5 residues within 4Å: Chain A: Y.4, P.10, D.239, W.241, P.243 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.4 GOL.6: 3 residues within 4Å: Chain A: L.88, Q.89 Ligands: N7D.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.89 GOL.7: 4 residues within 4Å: Chain A: P.191, R.250, Q.251, K.253 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.251, A:Q.251, A:K.253, A:K.253

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.8: 1 residues within 4Å: Chain A: E.217 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.217 Salt bridges: A:E.217 DMS.9: 3 residues within 4Å: Chain A: S.70, R.86, G.125 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.86, A:R.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kota, A. et al., Carbonic Anhydrase IX mimic complexed with ureido benzene sulfonamide MB11-710A. To Be Published

Release Date

2020-05-06

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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