SMTL ID : 6pxa.2 (3 other biounits)

The crystal structure of chloramphenicol acetyltransferase-like protein from Vibrio fischeri ES114 in complex with taurocholic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

homo-trimer

Ligands

3 x TCH: TAUROCHOLIC ACID(Non-covalent)

TCH.1: 19 residues within 4Å: Chain A: F.65, A.88, Q.91, G.92, F.101, P.102, F.103, S.104, E.107, F.108, F.116 Chain B: W.10, L.11, E.12, G.13, Y.30, Y.32, S.34 Ligands: GOL.3 10 PLIP interactions: 8 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.65, A:A.88, A:P.102, A:P.102, A:F.116, B:Y.32 Hydrogen bonds: A:S.104, A:S.104, A:S.104, B:G.13 TCH.4: 18 residues within 4Å: Chain B: F.65, Q.91, G.92, F.101, P.102, F.103, S.104, E.107, F.108, F.116 Chain C: W.10, L.11, E.12, G.13, Y.30, Y.32, S.34 Ligands: GOL.6 9 PLIP interactions: 2 interactions with chain C, 7 interactions with chain B Hydrophobic interactions: C:Y.32, B:F.65, B:P.102, B:P.102, B:F.116 Hydrogen bonds: C:G.13, B:S.104, B:S.104, B:S.104 TCH.7: 18 residues within 4Å: Chain A: W.10, L.11, E.12, G.13, Y.30, Y.32 Chain C: F.65, A.88, Q.91, G.92, F.101, P.102, F.103, S.104, E.107, F.108, F.116 Ligands: GOL.10 11 PLIP interactions: 8 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:F.65, C:A.88, C:P.102, C:P.102, C:F.116, A:L.11, A:Y.32 Hydrogen bonds: C:S.104, C:S.104, C:S.104, A:G.13

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: Y.32, S.34 Chain C: H.93 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: H.93 Chain B: Y.32, S.34 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain B: H.93 Chain C: Y.32, S.34 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain B: E.133, R.151 Chain C: E.133, R.151 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: P.102, F.103, S.104 Ligands: TCH.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.103 GOL.6: 4 residues within 4Å: Chain B: P.102, F.103, S.104 Ligands: TCH.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.103 GOL.10: 3 residues within 4Å: Chain C: P.102, F.103 Ligands: TCH.7 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:P.102 Water bridges: C:P.102, C:F.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of chloramphenicol acetyltransferase-like protein from Vibrio fischeri ES114 in complex with taurocholic acid. To Be Published

Release Date

2019-09-25

Peptides

Chloramphenicol acetyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Chloramphenicol acetyltransferase

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