SMTL ID : 6r7i.1

Structural basis of Cullin-2 RING E3 ligase regulation by the COP9 signalosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain E: R.106, V.107, N.108, I.150, D.151, T.154 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:R.106, E:I.150, E:D.151, E:T.154 ZN.2: 5 residues within 4Å: Chain M: N.30, D.34, L.35, C.36, I.37 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:D.34, M:L.35 ZN.3: 7 residues within 4Å: Chain M: C.25, I.32, T.52, V.53, A.61, F.62, H.63 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:T.52, M:A.61 ZN.4: 1 residues within 4Å: Chain M: H.65 1 PLIP interactions: 1 interactions with chain M Metal complexes: M:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Faull, S.V. et al., Structural basis of Cullin 2 RING E3 ligase regulation by the COP9 signalosome. Nat Commun (2019)

Release Date

2019-08-28

Peptides

COP9 signalosome complex subunit 1: A
COP9 signalosome complex subunit 2: B
COP9 signalosome complex subunit 3: C
COP9 signalosome complex subunit 4: D
COP9 signalosome complex subunit 5: E
COP9 signalosome complex subunit 6: F
COP9 signalosome complex subunit 7b: G
COP9 signalosome complex subunit 8: H
NEDD8: I
Cullin-2: J
Elongin-B: K
Elongin-C: L
E3 ubiquitin-protein ligase RBX1: M

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
N

J
O

K
P

L
Q

M
R

COP9 signalosome complex subunit 1

COP9 signalosome complex subunit 2

COP9 signalosome complex subunit 3

COP9 signalosome complex subunit 4

COP9 signalosome complex subunit 5

COP9 signalosome complex subunit 6

COP9 signalosome complex subunit 7b

COP9 signalosome complex subunit 8

NEDD8

Cullin-2

Elongin-B

Elongin-C

E3 ubiquitin-protein ligase RBX1

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