SMTL ID : 6rke.1

Molybdenum storage protein - P212121, ADP, molybdate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-6-6-mer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 22 residues within 4Å: Chain A: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain B: T.18 Ligands: MG.2, PO4.5 26 PLIP interactions: 23 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:G.44, A:Q.45, A:Q.45, A:S.46, A:D.189, A:E.190, A:E.190, A:Y.194, A:Y.194, A:N.197, A:K.199, A:I.224 Water bridges: A:K.41, A:K.41, A:R.82, A:R.82, A:R.82, A:T.168, A:T.168, B:Q.20, B:Q.20, B:Q.20 Salt bridges: A:K.41, A:R.82, A:K.188, A:K.188 ADP.11: 22 residues within 4Å: Chain C: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain D: T.18 Ligands: MG.12, PO4.14 23 PLIP interactions: 20 interactions with chain C, 3 interactions with chain D Hydrogen bonds: C:G.44, C:Q.45, C:Q.45, C:S.46, C:D.189, C:E.190, C:E.190, C:Y.194, C:Y.194, C:K.199 Water bridges: C:K.41, C:G.78, C:R.82, C:R.82, C:R.82, C:T.168, D:Q.20, D:Q.20, D:Q.20 Salt bridges: C:K.41, C:R.82, C:K.188, C:K.188 ADP.20: 22 residues within 4Å: Chain E: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain F: T.18 Ligands: MG.21, PO4.24 21 PLIP interactions: 19 interactions with chain E, 2 interactions with chain F Hydrogen bonds: E:G.44, E:Q.45, E:Q.45, E:S.46, E:D.189, E:E.190, E:E.190, E:Y.194, E:Y.194, E:K.199 Water bridges: E:K.41, E:K.41, E:K.41, E:N.197, E:N.197, F:Q.20, F:Q.20 Salt bridges: E:K.41, E:R.82, E:K.188, E:K.188 ADP.28: 22 residues within 4Å: Chain G: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain H: T.18 Ligands: MG.29, PO4.32 23 PLIP interactions: 20 interactions with chain G, 3 interactions with chain H Hydrogen bonds: G:G.44, G:Q.45, G:Q.45, G:S.46, G:D.189, G:E.190, G:Y.194, G:Y.194, G:K.199 Water bridges: G:K.41, G:K.41, G:K.41, G:K.41, G:R.82, G:R.82, G:R.82, H:Q.20, H:Q.20, H:Q.20 Salt bridges: G:K.41, G:R.82, G:K.188, G:K.188 ADP.37: 21 residues within 4Å: Chain I: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain J: T.18 Ligands: MG.39 22 PLIP interactions: 18 interactions with chain I, 4 interactions with chain J Hydrogen bonds: I:G.44, I:Q.45, I:Q.45, I:S.46, I:D.189, I:E.190, I:Y.194, I:Y.194, I:K.199 Water bridges: I:K.41, I:G.78, I:R.82, I:R.82, I:T.168, J:Q.20, J:Q.20, J:Q.20, J:Q.20 Salt bridges: I:K.41, I:R.82, I:K.188, I:K.188 ADP.45: 22 residues within 4Å: Chain K: K.41, G.43, G.44, Q.45, S.46, R.82, K.188, D.189, E.190, G.192, L.193, Y.194, A.196, N.197, P.198, K.199, D.222, S.223, I.224 Chain L: T.18 Ligands: MG.46, PO4.49 23 PLIP interactions: 3 interactions with chain L, 20 interactions with chain K Water bridges: L:Q.20, L:Q.20, L:Q.20, K:K.41, K:K.41, K:K.41, K:R.82, K:T.168, K:N.197, K:N.197 Hydrogen bonds: K:G.44, K:Q.45, K:Q.45, K:S.46, K:D.189, K:E.190, K:Y.194, K:Y.194, K:K.199 Salt bridges: K:K.41, K:R.82, K:K.188, K:K.188

12 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: R.82, K.188 Ligands: ADP.1, MOO.4, PO4.5 No protein-ligand interaction detected (PLIP) MG.8: 4 residues within 4Å: Chain B: D.170, E.189, P.226 Ligands: ATP.7 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.189, B:P.226, H2O.5, H2O.5 MG.12: 6 residues within 4Å: Chain C: R.82, K.188 Chain D: Q.20 Ligands: ADP.11, MOO.13, PO4.14 No protein-ligand interaction detected (PLIP) MG.17: 4 residues within 4Å: Chain D: D.170, E.189, P.226 Ligands: ATP.16 4 PLIP interactions: 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.189, D:P.226, H2O.15, H2O.15 MG.21: 4 residues within 4Å: Chain E: R.82, K.188 Ligands: ADP.20, PO4.24 No protein-ligand interaction detected (PLIP) MG.26: 4 residues within 4Å: Chain F: D.170, E.189, P.226 Ligands: ATP.25 4 PLIP interactions: 2 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.189, F:P.226, H2O.24, H2O.24 MG.29: 5 residues within 4Å: Chain G: R.82, K.188 Ligands: ADP.28, MOO.31, PO4.32 No protein-ligand interaction detected (PLIP) MG.34: 4 residues within 4Å: Chain H: D.170, E.189, P.226 Ligands: ATP.33 4 PLIP interactions: 2 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.189, H:P.226, H2O.31, H2O.32 MG.39: 5 residues within 4Å: Chain I: K.41, R.82, K.188 Ligands: ADP.37, PO4.41 No protein-ligand interaction detected (PLIP) MG.43: 5 residues within 4Å: Chain J: K.44, D.170, E.189, P.226 Ligands: ATP.42 4 PLIP interactions: 2 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:E.189, J:P.226, H2O.39, H2O.39 MG.46: 6 residues within 4Å: Chain K: K.41, R.82, K.188 Chain L: Q.20 Ligands: ADP.45, PO4.49 No protein-ligand interaction detected (PLIP) MG.52: 4 residues within 4Å: Chain L: D.170, E.189, P.226 Ligands: ATP.51 4 PLIP interactions: 2 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.189, L:P.226, H2O.46, H2O.46

12 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)

8M0.3: 17 residues within 4Å: Chain A: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179 Chain B: Y.154, H.155, H.156, H.157 Ligands: 8M0.9 11 PLIP interactions: 6 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:G.126, A:G.127, A:A.128, A:G.129, A:M.148, B:H.155, B:H.156, B:H.156, B:H.157, B:H.157 Water bridges: A:S.146 8M0.9: 16 residues within 4Å: Chain B: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: 8M0.3, LHW.19 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:A.105, B:Q.110, B:Y.126, B:E.128, B:E.128, B:H.129, B:H.129, B:H.129, B:S.149 Water bridges: B:Y.154, B:H.155 8M0.15: 16 residues within 4Å: Chain C: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, L.175, F.179 Chain D: Y.154, H.155, H.156, H.157 Ligands: 8M0.18 9 PLIP interactions: 4 interactions with chain C, 5 interactions with chain D Hydrogen bonds: C:G.126, C:G.129, C:M.148, D:H.155, D:H.156, D:H.156, D:H.157, D:H.157 Water bridges: C:S.146 8M0.18: 16 residues within 4Å: Chain D: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: 8M0.15, LHW.19 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:A.105, D:Q.110, D:H.129, D:H.129, D:H.129, D:S.149 Water bridges: D:S.149, D:Y.154, D:H.155 8M0.22: 17 residues within 4Å: Chain E: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179 Chain F: Y.154, H.155, H.156, H.157 Ligands: 8M0.27 12 PLIP interactions: 7 interactions with chain E, 5 interactions with chain F Hydrogen bonds: E:G.127, E:S.146, E:M.148, E:K.152, E:K.152, F:H.155, F:H.156, F:H.156, F:H.157 Water bridges: E:S.146, E:S.146, F:H.156 8M0.27: 16 residues within 4Å: Chain F: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: LHW.19, 8M0.22 12 PLIP interactions: 12 interactions with chain F Hydrogen bonds: F:A.105, F:Q.110, F:Y.126, F:E.128, F:E.128, F:H.129, F:H.129, F:H.129, F:S.149 Water bridges: F:S.149, F:Y.154, F:H.155 8M0.30: 17 residues within 4Å: Chain G: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179 Chain H: Y.154, H.155, H.156, H.157 Ligands: 8M0.35 10 PLIP interactions: 5 interactions with chain G, 5 interactions with chain H Hydrogen bonds: G:G.127, G:A.128, G:G.129, G:M.148, H:H.155, H:H.156, H:H.156, H:H.157 Water bridges: G:S.146, H:H.156 8M0.35: 16 residues within 4Å: Chain H: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: 8M0.30, LHW.54 8 PLIP interactions: 8 interactions with chain H Hydrogen bonds: H:A.105, H:Q.110, H:E.128, H:H.129, H:H.129, H:S.149 Water bridges: H:Y.126, H:V.127 8M0.38: 15 residues within 4Å: Chain I: V.125, G.126, G.127, A.128, F.145, S.146, M.148, P.150, L.175, F.179 Chain J: Y.154, H.155, H.156, H.157 Ligands: 8M0.44 6 PLIP interactions: 2 interactions with chain I, 4 interactions with chain J Hydrogen bonds: I:A.128, I:M.148, J:H.155, J:H.156, J:H.157 Water bridges: J:H.155 8M0.44: 16 residues within 4Å: Chain J: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: 8M0.38, LHW.54 10 PLIP interactions: 10 interactions with chain J Hydrogen bonds: J:A.105, J:Q.110, J:Y.126, J:E.128, J:E.128, J:H.129, J:H.129, J:S.149 Water bridges: J:Y.126, J:V.127 8M0.47: 16 residues within 4Å: Chain K: V.125, G.126, G.127, A.128, F.145, S.146, M.148, P.150, K.152, L.175, F.179 Chain L: Y.154, H.155, H.156, H.157 Ligands: 8M0.53 10 PLIP interactions: 5 interactions with chain K, 5 interactions with chain L Hydrogen bonds: K:G.127, K:M.148, K:K.152, L:H.155, L:H.156, L:H.156, L:H.157, L:H.157 Water bridges: K:S.146, K:S.146 8M0.53: 16 residues within 4Å: Chain L: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155 Ligands: 8M0.47, LHW.54 9 PLIP interactions: 9 interactions with chain L Hydrogen bonds: L:A.105, L:Q.110, L:E.128, L:H.129, L:H.129, L:S.149 Water bridges: L:Y.126, L:V.127, L:Y.154

6 x MOO: MOLYBDATE ION(Non-covalent)

MOO.4: 10 residues within 4Å: Chain A: A.77, G.78, A.81, R.82, Y.85, R.167, T.168 Chain B: L.19 Ligands: MG.2, PO4.5 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:A.77, A:G.78, A:R.82, A:R.82, A:Y.85, A:R.167, A:T.168 Water bridges: A:R.167, A:T.168, A:T.168, A:D.169, A:E.226, B:T.18 MOO.13: 9 residues within 4Å: Chain C: A.77, G.78, R.82, Y.85, R.167, T.168 Chain D: L.19 Ligands: MG.12, PO4.14 12 PLIP interactions: 12 interactions with chain C Hydrogen bonds: C:A.77, C:G.78, C:R.82, C:R.82, C:Y.85, C:R.167, C:R.167, C:T.168, C:E.226 Water bridges: C:T.168, C:T.168, C:D.169 MOO.23: 8 residues within 4Å: Chain E: A.77, G.78, R.82, Y.85, R.167, T.168 Chain F: L.19 Ligands: PO4.24 9 PLIP interactions: 9 interactions with chain E Hydrogen bonds: E:A.77, E:G.78, E:R.82, E:R.82, E:R.167, E:R.167, E:T.168 Water bridges: E:E.226, E:E.226 MOO.31: 11 residues within 4Å: Chain G: A.77, G.78, A.81, R.82, Y.85, M.148, R.167, T.168 Chain H: L.19 Ligands: MG.29, PO4.32 10 PLIP interactions: 10 interactions with chain G Hydrogen bonds: G:A.77, G:G.78, G:G.78, G:R.82, G:R.82, G:R.167, G:T.168 Water bridges: G:Q.45, G:T.168, G:E.226 MOO.40: 9 residues within 4Å: Chain I: A.77, G.78, R.82, Y.85, M.148, R.167, T.168 Chain J: L.19 Ligands: PO4.41 9 PLIP interactions: 9 interactions with chain I Hydrogen bonds: I:A.77, I:G.78, I:R.82, I:R.82, I:R.167, I:R.167, I:T.168 Water bridges: I:T.168, I:D.169 MOO.48: 8 residues within 4Å: Chain K: A.77, G.78, R.82, Y.85, R.167, T.168 Chain L: L.19 Ligands: PO4.49 10 PLIP interactions: 10 interactions with chain K Hydrogen bonds: K:A.77, K:G.78, K:R.82, K:R.82, K:Y.85, K:R.167, K:T.168 Water bridges: K:T.168, K:T.168, K:D.169

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 9 residues within 4Å: Chain A: G.76, A.77, G.78, R.82, R.167, T.168 Ligands: ADP.1, MG.2, MOO.4 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:A.77, A:G.78, A:T.168, A:T.168 Water bridges: A:K.41, A:K.41, A:Q.45, A:R.82, A:R.82, A:D.169 Salt bridges: A:K.41, A:R.82 PO4.14: 9 residues within 4Å: Chain C: G.76, A.77, G.78, R.82, R.167, T.168 Ligands: ADP.11, MG.12, MOO.13 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:A.77, C:G.78, C:T.168 Water bridges: C:K.41, C:K.41, C:K.41, C:R.82, C:R.82, C:E.226 Salt bridges: C:K.41, C:R.82 PO4.24: 10 residues within 4Å: Chain E: K.41, G.76, A.77, G.78, R.82, R.167, T.168 Ligands: ADP.20, MG.21, MOO.23 12 PLIP interactions: 12 interactions with chain E Hydrogen bonds: E:A.77, E:G.78, E:T.168, E:T.168, E:E.226, E:E.226 Water bridges: E:K.41, E:K.41, E:R.82, E:T.168 Salt bridges: E:K.41, E:R.82 PO4.32: 10 residues within 4Å: Chain G: K.41, G.76, A.77, G.78, R.82, R.167, T.168 Ligands: ADP.28, MG.29, MOO.31 13 PLIP interactions: 13 interactions with chain G Hydrogen bonds: G:A.77, G:G.78, G:T.168, G:E.226 Water bridges: G:K.41, G:K.41, G:Q.45, G:R.82, G:R.82, G:R.82, G:T.168 Salt bridges: G:K.41, G:R.82 PO4.41: 10 residues within 4Å: Chain I: A.77, G.78, R.82, Y.85, M.148, R.167, T.168 Chain J: L.19 Ligands: MG.39, MOO.40 11 PLIP interactions: 11 interactions with chain I Hydrogen bonds: I:A.77, I:G.78, I:Y.85, I:T.168 Water bridges: I:R.82, I:R.82, I:R.167, I:T.168, I:D.169 Salt bridges: I:R.82, I:R.167 PO4.49: 9 residues within 4Å: Chain K: G.76, A.77, G.78, R.82, R.167, T.168 Ligands: ADP.45, MG.46, MOO.48 12 PLIP interactions: 12 interactions with chain K Hydrogen bonds: K:G.44, K:A.77, K:G.78, K:T.168, K:T.168 Water bridges: K:K.41, K:K.41, K:K.41, K:R.82, K:D.169 Salt bridges: K:K.41, K:R.82

2 x LJB: MO(8)-O(26) Cluster(Non-covalent)

LJB.6: 19 residues within 4Å: Chain A: P.123, V.125, S.131, A.132, V.133, P.134 Chain C: P.123, V.124, V.125, S.131, A.132, V.133, P.134 Chain E: P.123, V.125, S.131, A.132, V.133, P.134 11 PLIP interactions: 4 interactions with chain C, 5 interactions with chain A, 2 interactions with chain E Hydrogen bonds: C:V.124, C:S.131, C:S.131, C:V.133, A:S.131, A:S.131, A:S.131, A:S.131, A:V.133, E:A.132, E:V.133 LJB.50: 21 residues within 4Å: Chain G: P.123, V.125, L.130, S.131, A.132, V.133, P.134 Chain I: P.123, V.125, S.131, A.132, V.133, P.134 Chain K: P.123, V.125, G.129, L.130, S.131, A.132, V.133, P.134 9 PLIP interactions: 7 interactions with chain K, 1 interactions with chain I, 1 interactions with chain G Hydrogen bonds: K:G.129, K:L.130, K:L.130, K:L.130, K:L.130, K:A.132, K:V.133, I:V.133, G:V.133

6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.7: 25 residues within 4Å: Chain A: S.15 Chain B: K.44, G.46, G.47, R.48, V.49, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.8 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:G.46, B:G.47, B:R.48, B:V.49, B:A.79, B:G.80, B:R.84, B:N.190, B:N.190, B:Y.195, B:N.200, B:N.200, B:P.224 Water bridges: B:K.44, B:R.84, B:D.170, B:D.170 Salt bridges: B:K.44, B:K.44 ATP.16: 24 residues within 4Å: Chain C: S.15 Chain D: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.17 18 PLIP interactions: 18 interactions with chain D Hydrogen bonds: D:G.46, D:G.47, D:R.48, D:V.49, D:A.79, D:G.80, D:R.84, D:N.190, D:N.190, D:Y.195, D:Y.195, D:N.200, D:N.200 Water bridges: D:K.44, D:D.170, D:D.170 Salt bridges: D:K.44, D:K.44 ATP.25: 25 residues within 4Å: Chain E: S.15 Chain F: K.44, G.46, G.47, R.48, V.49, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.26 19 PLIP interactions: 19 interactions with chain F Hydrogen bonds: F:G.46, F:G.47, F:R.48, F:V.49, F:A.79, F:G.80, F:R.84, F:N.190, F:N.190, F:Y.195, F:Y.195, F:N.200, F:N.200 Water bridges: F:K.44, F:R.84, F:D.170, F:D.170 Salt bridges: F:K.44, F:K.44 ATP.33: 24 residues within 4Å: Chain G: S.15 Chain H: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.34 20 PLIP interactions: 20 interactions with chain H Hydrogen bonds: H:G.46, H:G.47, H:R.48, H:V.49, H:A.79, H:G.80, H:R.84, H:E.189, H:N.190, H:N.190, H:Y.195, H:N.200, H:N.200, H:P.224 Water bridges: H:K.44, H:R.84, H:D.170, H:D.170 Salt bridges: H:K.44, H:K.44 ATP.42: 23 residues within 4Å: Chain J: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.43 18 PLIP interactions: 18 interactions with chain J Hydrogen bonds: J:G.46, J:G.47, J:R.48, J:V.49, J:A.79, J:G.80, J:R.84, J:N.190, J:N.190, J:Y.195, J:N.200, J:N.200, J:P.224 Water bridges: J:K.44, J:R.84, J:D.170 Salt bridges: J:K.44, J:K.44 ATP.51: 24 residues within 4Å: Chain K: S.15 Chain L: K.44, G.46, G.47, R.48, G.78, A.79, G.80, R.84, A.169, E.189, N.190, V.191, G.193, I.194, Y.195, A.197, D.198, P.199, N.200, P.224, L.225, P.226 Ligands: MG.52 21 PLIP interactions: 21 interactions with chain L Hydrogen bonds: L:G.46, L:G.47, L:R.48, L:V.49, L:A.79, L:G.80, L:R.84, L:N.190, L:N.190, L:Y.195, L:Y.195, L:N.200, L:N.200 Water bridges: L:K.44, L:K.44, L:K.44, L:R.48, L:D.170, L:D.170 Salt bridges: L:K.44, L:K.44

2 x M10: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI)(Non-covalent)

M10.10: 12 residues within 4Å: Chain B: T.131, Q.135, I.138, H.139 Chain D: T.131, Q.135, I.138, H.139 Chain F: T.131, Q.135, I.138, H.139 8 PLIP interactions: 3 interactions with chain F, 2 interactions with chain D, 3 interactions with chain B Hydrogen bonds: F:T.131, F:Q.135, F:H.139, D:Q.135, B:Q.135, B:Q.135, B:H.139 Water bridges: D:Q.135 M10.36: 10 residues within 4Å: Chain H: T.131, Q.135, I.138, H.139 Chain J: T.131, I.138, H.139 Chain L: T.131, I.138, H.139 9 PLIP interactions: 2 interactions with chain J, 4 interactions with chain H, 3 interactions with chain L Hydrogen bonds: J:T.131, J:H.139, H:T.131, H:Q.135, H:H.139, L:T.131, L:T.131 Water bridges: H:Q.135, L:Q.135

2 x LHW: MO(10)-O(35) Cluster(Non-covalent)

LHW.19: 15 residues within 4Å: Chain B: E.128, P.130, T.131, Q.135 Chain D: E.128, P.130, T.131, Q.135 Chain F: E.128, P.130, T.131, Q.135 Ligands: 8M0.9, 8M0.18, 8M0.27 18 PLIP interactions: 8 interactions with chain D, 5 interactions with chain F, 5 interactions with chain B Hydrogen bonds: D:E.128, D:E.128, D:E.128, D:E.128, D:T.131, D:T.131, D:Q.135, D:Q.135, F:E.128, F:T.131, F:Q.135, B:T.131, B:T.131, B:T.131, B:Q.135 Water bridges: F:T.131, F:T.131, B:E.128 LHW.54: 15 residues within 4Å: Chain H: E.128, P.130, T.131, Q.135 Chain J: E.128, P.130, T.131, Q.135 Chain L: E.128, P.130, T.131, Q.135 Ligands: 8M0.35, 8M0.44, 8M0.53 18 PLIP interactions: 8 interactions with chain L, 5 interactions with chain J, 5 interactions with chain H Hydrogen bonds: L:E.128, L:E.128, L:E.128, L:T.131, L:Q.135, L:Q.135, J:T.131, J:T.131, J:Q.135, H:E.128, H:E.128, H:Q.135 Water bridges: L:E.128, L:T.131, J:E.128, J:T.131, H:T.131, H:T.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brunle, S. et al., Molybdate pumping into the molybdenum storage protein via an ATP-powered piercing mechanism. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-12-18

Peptides

Molybdenum storage protein subunit beta: ACEGIK
Molybdenum storage protein subunit alpha: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
D

E
F

G
H

I
J

K
L

B
A

D
C

F
E

H
G

J
I

L
K

Molybdenum storage protein subunit beta

Molybdenum storage protein subunit alpha

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