SMTL ID : 6rmc.1 (1 other biounit)

Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: E.55, T.56, G.57, S.58, G.59, K.60, T.61, T.62, S.92, R.96, F.292, T.314, D.316 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.57, A:S.58, A:G.59, A:K.60, A:T.61, A:T.61, A:T.62, A:T.62, A:S.92, A:D.316 Water bridges: A:G.57, A:K.60, A:T.61 Salt bridges: A:K.60 pi-Stacking: A:F.292

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: T.61, D.152, E.153, S.312 Ligands: ADP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.61, H2O.1, H2O.1, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hamann, F. et al., Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-02-05

Peptides

Putative mRNA splicing factor: A
Putative pre-mRNA splicing protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Putative mRNA splicing factor

Putative pre-mRNA splicing protein

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