SMTL ID : 6rzg.1

Galectin-3C in complex with meta-fluoroaryltriazole galactopyranosyl 1-thio-D-glucopyranoside derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.01 Å

Oligo State

monomer

Ligands

1 x KOW: (2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol(Non-covalent)

KOW.1: 14 residues within 4Å: Chain A: R.32, I.33, A.34, H.46, N.48, R.50, V.60, N.62, W.69, E.72, R.74, S.125, G.126 Ligands: CL.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.34 Hydrogen bonds: A:R.50, A:R.50, A:N.62, A:E.72, A:E.72, A:R.74 Water bridges: A:H.46, A:W.69, A:W.69 pi-Stacking: A:H.46 pi-Cation interactions: A:R.32

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.32, N.48, R.50 Ligands: KOW.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wallerstein, J. et al., Entropy-Entropy Compensation between the Protein, Ligand, and Solvent Degrees of Freedom Fine-Tunes Affinity in Ligand Binding to Galectin-3C. Jacs Au (2021)

Release Date

2020-07-08

Peptides

Galectin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-3

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