SMTL ID : 6rzm.1

Galectin-3C in complex with trifluoroaryltriazole monothiogalactoside derivative:5(Iodine)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.34 Å

Oligo State

monomer

Ligands

1 x KON: (2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-(3-iodanylphenyl)sulfanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol(Non-covalent)

KON.1: 14 residues within 4Å: Chain A: R.32, I.33, A.34, H.46, N.48, R.50, V.60, N.62, W.69, G.70, E.72, S.125, G.126 Ligands: CL.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.34 Hydrogen bonds: A:H.46, A:R.50, A:N.62 Water bridges: A:H.46, A:R.50, A:W.69 pi-Stacking: A:H.46 pi-Cation interactions: A:R.32

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 8 residues within 4Å: Chain A: P.5, Y.6, N.7, D.36, Q.38, K.121, G.123, I.124 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.7, A:K.121 Water bridges: A:D.36

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: R.32, N.48, R.50 Ligands: KON.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Verteramo, M.L. et al., Thermodynamic studies of halogen-bond interactions in galectin-3. to be published

Release Date

2020-07-08

Peptides

Galectin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-3

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