SMTL ID : 6sfg.1

CRYSTAL STRUCTURE OF DHQ1 FROM SALMONELLA TYPHI COVALENTLY MODIFIED BY COMPOUND 9

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

1 x FQZ: (1~{R},3~{S},4~{R},5~{R})-3-methyl-4,5-bis(hydroxyl)cyclohexane-1-carboxylic acid(Covalent)

FQZ.1: 14 residues within 4Å: Chain A: S.21, E.46, R.48, T.80, R.82, H.143, K.170, M.203, R.213, F.225, S.232, A.233, Q.236 Ligands: FSQ.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:K.170, A:F.225, A:F.225, A:F.225, A:A.233 Hydrogen bonds: A:S.21, A:R.48, A:R.82, A:K.170, A:S.232, A:S.232, A:Q.236 Water bridges: A:D.114 Salt bridges: A:R.213

1 x FSQ: (1~{S},3~{R},4~{S},5~{R})-3-methyl-3,4,5-tris(hydroxyl)cyclohexane-1-carboxylic Acid(Covalent)

FSQ.2: 14 residues within 4Å: Chain A: S.21, E.46, R.48, T.80, R.82, H.143, K.170, M.203, R.213, F.225, S.232, A.233, Q.236 Ligands: FQZ.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:K.170, A:F.225, A:F.225, A:F.225, A:A.233 Hydrogen bonds: A:S.21, A:R.48, A:R.82, A:H.143, A:K.170, A:S.232, A:S.232, A:Q.236 Water bridges: A:D.114 Salt bridges: A:R.213

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lence, E. et al., Self-Immolation of a Bacterial Dehydratase Enzyme by its Epoxide Product. Chemistry (2020)

Release Date

2020-04-15

Peptides

3-dehydroquinate dehydratase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-dehydroquinate dehydratase

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