- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 13 x FMT: FORMIC ACID(Non-functional Binders)
- 2 x MLA: MALONIC ACID(Non-covalent)
MLA.2: 9 residues within 4Å:- Chain A: Y.181, T.185, G.217, L.218, G.219, V.238, G.239, S.240
- Ligands: FMT.3
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Y.181, A:G.219, A:G.239, A:S.240
- Water bridges: A:Y.181, A:Y.181
MLA.23: 5 residues within 4Å:- Chain C: R.85
- Chain D: D.303, E.304, D.305, Q.307
4 PLIP interactions:1 interactions with chain D, 3 interactions with chain C- Hydrogen bonds: D:D.305
- Water bridges: C:V.86
- Salt bridges: C:R.85, C:R.85
- 2 x H9V: (2R,3S,4R)-3-(4'-chloro-2',6'-difluoro[1,1'-biphenyl]-4-yl)-4-(fluoromethyl)azetidine-2-carbonitrile(Non-covalent)
H9V.4: 15 residues within 4Å:- Chain A: D.64, P.65, G.66, D.136
- Chain B: V.30, P.31, L.34, I.184, N.185, F.188, Y.200, F.202, P.208, F.211, H.294
7 PLIP interactions:1 interactions with chain A, 6 interactions with chain B- Hydrogen bonds: A:G.66
- Hydrophobic interactions: B:I.184, B:F.188, B:F.188, B:Y.200, B:P.208
- pi-Stacking: B:F.202
H9V.18: 15 residues within 4Å:- Chain C: D.64, G.66, Y.108, D.136
- Chain D: V.30, P.31, L.34, I.184, N.185, F.188, Y.200, F.202, P.208, F.211, H.294
8 PLIP interactions:7 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:I.184, D:F.188, D:F.188, D:F.188, D:Y.200, D:P.208
- pi-Stacking: D:F.202
- Hydrogen bonds: C:G.66
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.5: 6 residues within 4Å:- Chain B: R.265, L.266, G.334, R.335, D.337
- Ligands: EDO.15
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:L.266, B:R.335, B:D.337
ACT.6: 4 residues within 4Å:- Chain B: G.351, R.355, F.404
- Chain D: L.165
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain D- Hydrophobic interactions: B:F.404, D:L.165
- Salt bridges: B:R.355
- Hydrogen bonds: D:L.165
ACT.16: 1 residues within 4Å:- Chain B: W.403
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:W.403
ACT.17: 3 residues within 4Å:- Chain A: R.85
- Chain B: D.303, E.304
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:D.303, B:E.304
- Hydrogen bonds: B:D.303
- Salt bridges: A:R.85
- 3 x MLT: D-MALATE(Non-covalent)
MLT.13: 10 residues within 4Å:- Chain B: K.101, T.124, G.125, A.126, G.127, Q.128, H.129, A.316, G.317, E.364
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.125, B:G.127, B:Q.128, B:H.129
- Salt bridges: B:K.395
MLT.14: 7 residues within 4Å:- Chain B: G.20, G.21, P.22, S.23, G.24, W.25, E.332
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.23, B:S.23
MLT.24: 11 residues within 4Å:- Chain D: K.101, T.124, G.125, A.126, G.127, Q.128, H.129, A.316, G.317, E.364, K.395
8 PLIP interactions:8 interactions with chain D- Hydrophobic interactions: D:A.126, D:Q.128
- Hydrogen bonds: D:G.125, D:A.126, D:G.127, D:Q.128, D:H.129
- Salt bridges: D:K.395
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, C. et al., Crystal structure of tryptophan synthase from M. tuberculosis - open form with BRD6309 bound. To be Published
- Release Date
- 2019-10-30
- Peptides
- Tryptophan synthase alpha chain: AC
Tryptophan synthase beta chain: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CC
EB
DD
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 13 x FMT: FORMIC ACID(Non-functional Binders)
- 2 x MLA: MALONIC ACID(Non-covalent)
- 2 x H9V: (2R,3S,4R)-3-(4'-chloro-2',6'-difluoro[1,1'-biphenyl]-4-yl)-4-(fluoromethyl)azetidine-2-carbonitrile(Non-covalent)
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 3 x MLT: D-MALATE(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, C. et al., Crystal structure of tryptophan synthase from M. tuberculosis - open form with BRD6309 bound. To be Published
- Release Date
- 2019-10-30
- Peptides
- Tryptophan synthase alpha chain: AC
Tryptophan synthase beta chain: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CC
EB
DD
F