SMTL ID : 6v95.1

Peanut lectin complexed with divalent N-beta-D-galactopyranosyl-L-tartaramidoyl derivative (diNGT)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.78 Å
Oligo State
homo-tetramer
Ligands
4 x QSG: (2R,3R)-N-[(1-{(3S,3aR,6S,6aR)-6-[4-({[(2R,3R)-2,3-dihydroxy-4-oxo-4-{[(2R,3R,4R,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]amino}butanoyl]amino}methyl)-1H-1,2,3-triazol-1-yl]hexahydrofuro[3,2-b]furan-3-yl}-1H-1,2,3-triazol-4-yl)methyl]-2,3-dihydroxy-N'-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]butanediamide (non-preferred name)(Non-covalent)
4 x MN: MANGANESE (II) ION(Non-covalent)
4 x CA: CALCIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Cagnoni, A.J. et al., Crystal structures of peanut lectin in the presence of synthetic beta-N- and beta-S-galactosides disclose evidence for the recognition of different glycomimetic ligands. Acta Crystallogr D Struct Biol (2020)
Release Date
2020-10-28
Peptides
Galactose-binding lectin: ABCD
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D

Galactose-binding lectin

Toggle Identical (ABCD)

Related Entries With Identical Sequence

1ciw.1 | 1cq9.1 | 1cr7.1 | 1cr7.2 | 1qf3.1 | 1rir.1 | 1rit.1 | 2dv9.1 | 2dva.1 | 2dvb.1 | 2dvd.1 | 2dvf.1 | 2dvg.1 | 2pel.1 | 2tep.1 | 6vav.1 | 6vaw.1 | 6vc3.1 | 6vc4.1 | 6vgf.1