SMTL ID : 6xbw.1

Cryo-EM structure of V-ATPase from bovine brain, state 1

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-1-1-3-1-3-1-1-1-1-1-1-1-9-1-mer
Ligands
1 x MG: MAGNESIUM ION(Non-covalent)
1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
9 x POV: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)(Covalent)
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x OLA: OLEIC ACID(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wang, R. et al., Cryo-EM structures of intact V-ATPase from bovine brain. Nat Commun (2020)
Release Date
2020-08-19
Peptides
V-type proton ATPase catalytic subunit A: ABC
V-type proton ATPase subunit B, brain isoform: DEF
V-type proton ATPase subunit C 1: G
V-type proton ATPase subunit D: H
V-type proton ATPase subunit E 1: IJK
V-type proton ATPase subunit F: L
V-type proton ATPase subunit G: MNO
V-type proton ATPase subunit H: P
V-type proton ATPase subunit a: Q
V-type proton ATPase 21 kDa proteolipid subunit: R
V-type proton ATPase subunit d 1: S
V-type proton ATPase subunit e 2: T
V-type proton ATPase subunit S1: U
Renin receptor: V
V-type proton ATPase 16 kDa proteolipid subunit: WXYZ01234
Ribonuclease kappa: 5
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
a
R
b
S
d
T
e
U
s
V
r
W
c
X
g
Y
k
Z
l
0
m
1
n
2
o
3
p
4
q
5
f
Membrane
We predict this structure to be a membrane protein.

V-type proton ATPase catalytic subunit A

V-type proton ATPase subunit B, brain isoform

V-type proton ATPase subunit C 1

V-type proton ATPase subunit D

V-type proton ATPase subunit E 1

Toggle Identical (IJ)

V-type proton ATPase subunit F

V-type proton ATPase subunit G

Toggle Identical (MNO)

V-type proton ATPase subunit H

V-type proton ATPase subunit a

V-type proton ATPase 21 kDa proteolipid subunit

V-type proton ATPase subunit d 1

V-type proton ATPase subunit e 2

V-type proton ATPase subunit S1

Renin receptor

V-type proton ATPase 16 kDa proteolipid subunit

Toggle Identical (234) Toggle Identical (WXYZ01)

Ribonuclease kappa

Related Entries With Identical Sequence

6wlw.1 | 6wm2.1 | 6wm3.1 | 6wm4.1 | 6xby.1 | 7khr.1