SMTL ID : 6yp9.1

Rabbit muscle actin in complex with ADF-H and ATP-ATTO-488

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 22 residues within 4Å: Chain A: G.13, S.14, G.15, L.16, K.18, G.74, G.156, D.157, G.158, V.159, G.182, R.183, R.210, K.213, E.214, G.301, G.302, T.303, M.305, Y.306, K.336 Ligands: CA.2 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:S.14, A:G.15, A:L.16, A:L.16, A:G.156, A:D.157, A:D.157, A:G.158, A:V.159, A:V.159, A:K.213, A:E.214, A:G.302, A:K.336 Water bridges: A:K.18, A:K.18, A:D.157, A:T.186, A:R.210, A:E.214, A:Y.306, A:K.336 Salt bridges: A:K.18, A:K.18 pi-Stacking: A:Y.306

1 x CA: CALCIUM ION(Non-functional Binders)

CA.2: 1 residues within 4Å: Ligands: ATP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colombo, J. et al., A functional family of fluorescent nucleotide analogues to investigate actin dynamics and energetics. Nat Commun (2021)

Release Date

2020-12-09

Peptides

Actin, alpha skeletal muscle: A
Twinfilin-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Actin, alpha skeletal muscle

Twinfilin-1

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