SMTL ID : 6ypr.1

Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.26 A in H32 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.26 Å

Oligo State

homo-dimer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: N.136, A.142, S.144, H.151 Chain B: W.160 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.144, A:S.144, A:H.151 Water bridges: A:N.136 GOL.2: 4 residues within 4Å: Chain A: G.126, L.127, G.128, D.129 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.123, A:G.128 Water bridges: A:D.129, A:D.129 GOL.3: 2 residues within 4Å: Chain A: P.86, G.155 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.155 GOL.4: 5 residues within 4Å: Chain A: W.160 Chain B: N.136, A.142, S.144, H.151 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.144, B:S.144, B:H.151 Water bridges: B:N.136 GOL.5: 4 residues within 4Å: Chain B: G.126, L.127, G.128, D.129 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.123, B:G.128 Water bridges: B:D.129, B:D.129 GOL.6: 2 residues within 4Å: Chain B: P.86, G.155 1 PLIP interactions: 1 interactions with chain B Water bridges: B:G.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolot, R. et al., Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A. Biochim Biophys Acta Gen Subj (2021)

Release Date

2020-04-29

Peptides

Histidine triad nucleotide-binding protein 2, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
AAA

Histidine triad nucleotide-binding protein 2, mitochondrial

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