SMTL ID : 6z3p.1 (3 other biounits)

Structure of EV71 in complex with a protective antibody 38-3-11A Fab

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 26 residues within 4Å: Chain A: I.111, D.112, I.113, T.114, F.131, A.133, F.135, F.137, Y.153, M.154, F.155, P.177, S.178, V.179, V.190, V.192, M.195, Y.201, Q.202, W.203, N.228, M.229, M.230, F.233, A.275 Chain C: I.24 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:I.111, A:I.111, A:I.113, A:I.113, A:F.135, A:F.137, A:F.155, A:F.155, A:V.192, A:V.192, A:W.203, A:M.230, A:F.233 Hydrogen bonds: A:I.111, A:I.113, A:N.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, K.A. et al., Structural and functional analysis of protective antibodies targeting the threefold plateau of enterovirus 71. Nat Commun (2020)

Release Date

2020-09-02

Peptides

VP1: A
VP2: B
VP3: C
VP4: D
heavy chain: E
light chain: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
H

F
L

VP1

VP2

VP3

VP4

heavy chain

light chain

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