- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: F.61, R.62, G.63, A.66, K.155
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:G.63
- Water bridges: A:K.155, A:K.155
- Salt bridges: A:R.62, A:K.155
SO4.6: 5 residues within 4Å:- Chain B: F.61, R.62, G.63, A.66, K.155
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.63
- Water bridges: B:K.155, B:K.155
- Salt bridges: B:R.62, B:K.155
SO4.10: 5 residues within 4Å:- Chain C: F.61, R.62, G.63, A.66, K.155
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:G.63
- Water bridges: C:K.155, C:K.155
- Salt bridges: C:R.62, C:K.155
SO4.14: 5 residues within 4Å:- Chain D: F.61, R.62, G.63, A.66, K.155
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:G.63
- Water bridges: D:K.155, D:K.155
- Salt bridges: D:R.62, D:K.155
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 8 residues within 4Å:- Chain A: F.34, Q.35, L.80, R.84
- Chain C: H.86, S.121, V.122, P.124
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.35, A:Q.35
GOL.7: 8 residues within 4Å:- Chain B: F.34, Q.35, L.80, R.84
- Chain D: H.86, S.121, V.122, P.124
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.35, B:Q.35
GOL.11: 8 residues within 4Å:- Chain B: H.86, S.121, V.122, P.124
- Chain C: F.34, Q.35, L.80, R.84
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.35, C:Q.35
GOL.15: 8 residues within 4Å:- Chain A: H.86, S.121, V.122, P.124
- Chain D: F.34, Q.35, L.80, R.84
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:Q.35, D:Q.35
- 4 x ACY: ACETIC ACID(Non-functional Binders)
ACY.4: 4 residues within 4Å:- Chain A: D.20, Y.37, D.39, E.216
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.37
- Salt bridges: A:R.52, A:K.218
ACY.8: 4 residues within 4Å:- Chain B: D.20, Y.37, D.39, E.216
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.37
- Salt bridges: B:R.52, B:K.218
ACY.12: 4 residues within 4Å:- Chain C: D.20, Y.37, D.39, E.216
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:Y.37
- Salt bridges: C:R.52, C:K.218
ACY.16: 4 residues within 4Å:- Chain D: D.20, Y.37, D.39, E.216
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:Y.37
- Salt bridges: D:R.52, D:K.218
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Williams, H.M. et al., Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs. J.Biol.Chem. (2023)
- Release Date
- 2021-07-21
- Peptides
- Fibrinogen C domain-containing protein 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 4 x ACY: ACETIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Williams, H.M. et al., Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs. J.Biol.Chem. (2023)
- Release Date
- 2021-07-21
- Peptides
- Fibrinogen C domain-containing protein 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
BD
B