SMTL ID : 7axs.1

Structural characterisation of WDR5:CS-VIP8 interaction in cis state 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x ALQ- 4FO- ARG- ABA- DPN- EDN- S7Z: CS-VIP8, (ALQ)(4FO)R(ABA)(DPN)(EDN)(S7Z)(Non-covalent)

ALQ-4FO-ARG-ABA-DPN-EDN-S7Z.1: 18 residues within 4Å: Chain A: A.47, V.48, S.49, A.65, G.89, I.90, S.91, D.92, D.107, Y.131, F.133, F.149, K.259, Y.260, C.261, F.263, I.305, L.321 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.47, A:F.133, A:I.305, A:L.321 Hydrogen bonds: A:S.91, A:D.107, A:S.175, A:C.261 Water bridges: A:D.107, A:Y.260, A:Y.260 Salt bridges: A:D.92 pi-Stacking: A:Y.260 Halogen bonds: A:K.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Albert, L. et al., Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Cent.Sci. (2022)

Release Date

2021-12-15

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

WD repeat-containing protein 5

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