- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- monomer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 1 x S92: 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile(Non-covalent)
S92.7: 16 residues within 4Å:- Chain A: L.45, G.46, R.47, V.53, V.66, K.68, I.95, F.113, E.114, H.115, V.116, N.118, H.160, M.163, I.174, D.175
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:L.45, A:V.53, A:V.53, A:I.174
- Hydrogen bonds: A:V.116, A:V.116, A:D.175, A:D.175
- Water bridges: A:E.81
- 11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.8: 7 residues within 4Å:- Chain A: V.248, L.249, R.278, K.279, W.281, D.302
- Ligands: EDO.17
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:V.248, A:R.278, A:D.302, A:D.302
EDO.9: 4 residues within 4Å:- Chain A: W.24, D.25, Y.26, E.27
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.25, A:E.27
- Water bridges: A:Y.26
EDO.10: 2 residues within 4Å:- Chain A: Y.12, V.15
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Y.12
EDO.11: 4 residues within 4Å:- Chain A: R.8, D.14, T.17, P.184
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.8, A:D.14, A:T.17
EDO.12: 5 residues within 4Å:- Chain A: E.282, V.285, S.294, P.295, L.298
No protein-ligand interaction detected (PLIP)EDO.13: 3 residues within 4Å:- Chain A: R.278
- Ligands: EDO.14, EDO.17
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.278, A:R.278
EDO.14: 6 residues within 4Å:- Chain A: D.299, D.302, K.303, R.306
- Ligands: EDO.13, EDO.17
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.299
- Water bridges: A:D.299
EDO.15: 3 residues within 4Å:- Chain A: H.276, S.277, K.279
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:H.276, A:S.277, A:K.279
EDO.16: 6 residues within 4Å:- Chain A: P.6, S.7, R.8, P.184, G.185, M.208
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.8
EDO.17: 6 residues within 4Å:- Chain A: W.281, L.298, D.302
- Ligands: EDO.8, EDO.13, EDO.14
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.302
- Water bridges: A:R.278
EDO.18: 5 residues within 4Å:- Chain A: L.203, N.238, Y.239, D.266, F.269
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.238
- Water bridges: A:V.204, A:D.205, A:D.205
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Date, M., Metadynamics simulations of CK2 compound unbinding to understand slow dissociation kinetics. To Be Published
- Release Date
- 2021-11-24
- Peptides
- Casein kinase II subunit alpha: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- monomer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 1 x S92: 7-(cyclopropylamino)-5-(5-(6-oxo-1,6-dihydropyridin-3-yl)-1-(2-(piperidin-1-yl)ethyl)-1H-1,2,3-triazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile(Non-covalent)
- 11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Date, M., Metadynamics simulations of CK2 compound unbinding to understand slow dissociation kinetics. To Be Published
- Release Date
- 2021-11-24
- Peptides
- Casein kinase II subunit alpha: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A