SMTL ID : 7b1d.1

Cryo-EM of Aedes Aegypti Toll5A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: N.416, N.454 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain A: R.98, S.99, E.123, N.124, R.147 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 3 residues within 4Å: Chain B: N.416, Q.418, N.454 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain B: R.98, S.99, N.124, R.147 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 3 residues within 4Å: Chain A: N.494, Y.518, Q.519 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.494 NAG.6: 4 residues within 4Å: Chain A: L.143, N.144, S.166, N.167 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.144, A:S.166, A:N.167 NAG.7: 5 residues within 4Å: Chain A: Q.594, N.607, C.608, S.609, G.610 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.610 NAG.8: 5 residues within 4Å: Chain B: L.143, A.164, L.165, S.166, N.167 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saucereau, Y. et al., Structure and dynamics of Toll immunoreceptor activation in the mosquito Aedes aegypti. Nat Commun (2022)

Release Date

2022-07-13

Peptides

Toll-like receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Toll-like receptor

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