SMTL ID : 7b9o.1

Crystal structure of Retinoic Acid Receptor alpha (RXRA) in complexed with S169 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

hetero-2-2-mer

Ligands

2 x T72: 3-(5-(3,5-bis(trifluoromethyl)phenyl)-4-phenyloxazol-2-yl)propanoic acid(Non-covalent)

T72.1: 19 residues within 4Å: Chain A: I.42, A.45, A.46, Q.49, W.79, N.80, I.84, F.87, R.90, I.98, L.100, A.101, I.119, F.120, V.123, C.206, H.209, L.210, F.213 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.42, A:I.42, A:A.45, A:A.46, A:W.79, A:N.80, A:I.84, A:I.84, A:F.87, A:F.87, A:L.100, A:L.210 Hydrogen bonds: A:A.101 Salt bridges: A:R.90 T72.2: 19 residues within 4Å: Chain C: I.42, A.45, A.46, Q.49, W.79, N.80, I.84, F.87, R.90, I.98, L.100, A.101, I.119, F.120, V.123, C.206, H.209, L.210, F.213 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:I.42, C:I.42, C:A.45, C:A.46, C:W.79, C:N.80, C:I.84, C:I.84, C:F.87, C:F.87, C:L.100, C:L.210 Hydrogen bonds: C:A.101 Salt bridges: C:R.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schierle, S. et al., Oxaprozin Analogues as Selective RXR Agonists with Superior Properties and Pharmacokinetics. J.Med.Chem. (2021)

Release Date

2021-02-10

Peptides

Retinoic acid receptor RXR-alpha: AC
Nuclear receptor coactivator 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
C

D
C

Retinoic acid receptor RXR-alpha

Nuclear receptor coactivator 2

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