SMTL ID : 7bcm.2 (1 other biounit)

The DDR1 Kinase Domain Bound To SR302

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x TBK: ~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{S})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide(Non-covalent)

TBK.1: 20 residues within 4Å: Chain A: L.18, V.26, A.55, E.74, M.78, I.87, M.101, T.103, D.104, Y.105, M.106, L.159, F.164, H.166, L.175, I.184, A.185, D.186, F.187, G.188 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.87, A:T.103, A:L.159, A:F.164, A:D.186, A:F.187 Hydrogen bonds: A:E.74, A:T.103, A:M.106, A:D.186, A:D.186 Salt bridges: A:D.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rohm, S. et al., Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe. J.Med.Chem. (2021)

Release Date

2021-03-03

Peptides

Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Epithelial discoidin domain-containing receptor 1

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