SMTL ID : 7cb5.2 (1 other biounit)

The 6-phosphogluconate dehydrogenase from Staphylococcus aureus (6-phosphogluconate bound)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

homo-dimer

Ligands

2 x 6PG: 6-PHOSPHOGLUCONIC ACID(Non-covalent)

6PG.1: 17 residues within 4Å: Chain A: N.101, V.126, S.127, G.128, G.129, K.182, H.185, N.186, E.189, Y.190, Q.258, K.259, R.286, I.364 Chain B: R.444, F.447, H.450 9 PLIP interactions: 2 interactions with chain B, 7 interactions with chain A Salt bridges: B:R.444, B:H.450, A:K.182, A:R.286 Hydrogen bonds: A:S.127, A:G.128, A:G.129, A:E.189, A:K.259 6PG.2: 17 residues within 4Å: Chain A: R.444, H.450 Chain B: V.126, S.127, G.128, G.129, K.182, H.185, N.186, E.189, Y.190, G.257, Q.258, K.259, T.261, R.286, I.364 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.128, B:G.129, B:K.182, B:K.182, B:N.186, B:Y.190, B:K.259, B:T.261 Salt bridges: B:K.182, B:H.185, B:R.286, A:R.444, A:H.450

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance. Nat Commun (2021)

Release Date

2021-04-07

Peptides

6-phosphogluconate dehydrogenase, decarboxylating: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

6-phosphogluconate dehydrogenase, decarboxylating

Related Entries With Identical Sequence