SMTL ID : 7chs.1

Crystal structure of SARS-CoV-2 antibody P22A-1D1 with RBD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: F.20, G.21, F.24, N.25 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.24 Hydrogen bonds: A:N.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Q. et al., Potent and protective IGHV3-53/3-66 public antibodies and their shared escape mutant on the spike of SARS-CoV-2. Nat Commun (2021)

Release Date

2021-05-19

Peptides

Spike protein S1: A
antibody P22A-1D1 heavy chain: B
antibody P22A-1D1 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
H

C
L

Spike protein S1

antibody P22A-1D1 heavy chain

antibody P22A-1D1 light chain

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