SMTL ID : 7csa.1 (1 other biounit)

AtPrR1 with NADP+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 27 residues within 4Å: Chain A: G.16, A.17, T.18, G.19, Y.20, I.21, R.41, I.44, K.50, F.69, A.88, M.89, S.90, G.91, V.92, I.99, V.101, S.121, E.122, F.123, G.124, K.144, A.164, C.165, F.166, Y.169, F.170 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:F.166, A:F.166 Hydrogen bonds: A:G.16, A:T.18, A:T.18, A:G.19, A:Y.20, A:I.21, A:K.50, A:M.89, A:S.90, A:G.91, A:K.144, A:K.144, A:F.166 Water bridges: A:G.22, A:G.22, A:R.41, A:S.90, A:S.90, A:N.98, A:G.163 Salt bridges: A:R.41, A:K.50 NDP.2: 27 residues within 4Å: Chain B: G.16, A.17, T.18, G.19, Y.20, I.21, R.41, I.44, K.50, F.69, A.88, M.89, S.90, G.91, V.92, I.99, V.101, S.121, E.122, F.123, G.124, K.144, A.164, C.165, F.166, Y.169, F.170 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:F.166 Hydrogen bonds: B:G.16, B:T.18, B:T.18, B:G.19, B:Y.20, B:I.21, B:K.50, B:M.89, B:S.90, B:K.144, B:K.144, B:F.166 Water bridges: B:A.17, B:G.22, B:L.39, B:R.41, B:S.90, B:S.90, B:G.91, B:G.91, B:H.93, B:N.98, B:A.164 Salt bridges: B:R.41, B:K.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiao, Y. et al., Structure-based engineering of substrate specificity for pinoresinol-lariciresinol reductases. Nat Commun (2021)

Release Date

2021-06-09

Peptides

Pinoresinol reductase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Pinoresinol reductase 1

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