SMTL ID : 7e0b.1

The crystal structure of sorting nexin 27 and PBM complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.29 Å

Oligo State

monomer

Ligands

1 x ASP- ASP- VAL- GLN- THR- SER- PHE: PBM(Non-covalent)

ASP-ASP-VAL-GLN-THR-SER-PHE.1: 14 residues within 4Å: Chain A: G.13, Y.14, G.15, F.16, N.17, V.18, R.19, G.20, Q.21, V.22, H.75, V.79, I.82, R.83 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:V.18, A:V.22, A:H.75, A:V.79, A:I.82, A:I.82 Hydrogen bonds: A:Y.14, A:G.15, A:F.16, A:F.16, A:N.17, A:V.18, A:V.18, A:R.19, A:R.19, A:G.20, A:G.20, A:V.22, A:H.75 Water bridges: A:S.23, A:S.23, A:S.23, A:R.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, B. et al., SNX27 suppresses SARS-CoV-2 infection by inhibiting viral lysosome/late endosome entry. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-02-02

Peptides

Sorting nexin-27: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sorting nexin-27

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