SMTL ID : 7e8m.1

Crystal structure of SARS-CoV-2 antibody P2C-1F11 with mutated RBD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: G.7, F.10, N.11 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.10 Hydrogen bonds: A:N.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, R. et al., Analysis of SARS-CoV-2 variant mutations reveals neutralization escape mechanisms and the ability to use ACE2 receptors from additional species. Immunity (2021)

Release Date

2021-05-26

Peptides

Spike protein S1: A
antibody P2C-1F11 heavy chain: B
antibody P2C-1F11 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
H

C
L

Spike protein S1

antibody P2C-1F11 heavy chain

antibody P2C-1F11 light chain

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