- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
CL0.1: 22 residues within 4Å:- Chain A: Y.445, I.528, F.531, T.532, Y.590, N.591, S.594, V.595, F.598, W.636, A.645, F.663, H.667, Y.722, T.729, T.730, F.733
- Chain B: L.619, W.624
- Ligands: CLA.2, CLA.57, CLA.58
13 PLIP interactions:12 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: A:I.528, A:F.531, A:S.594, A:W.636, A:W.636, A:A.645, A:F.663, A:T.729, A:F.733, B:L.619
- Hydrogen bonds: A:Y.590, A:T.730
- Metal complexes: A:H.667
- 137 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)
CLA.2: 11 residues within 4Å:- Chain A: F.442, F.531, W.588, L.637, Y.722
- Chain B: H.653, W.656, A.657
- Ligands: CL0.1, CLA.58, CLA.59
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:F.442, A:F.442, A:F.442, A:F.531, A:W.588, A:Y.722
CLA.3: 12 residues within 4Å:- Chain A: W.18, H.23, F.24, H.42, A.45, H.46, F.48, G.68
- Ligands: CLA.4, CLA.5, CLA.10, CLA.53
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:W.18, A:H.42, A:A.45, A:F.48
- Salt bridges: A:H.23, A:K.61
- Metal complexes: A:H.46
CLA.4: 23 residues within 4Å:- Chain A: H.46, F.48, V.62, A.65, H.66, Q.69, L.70, I.73, F.74, L.77, W.338, H.339, Q.341, L.342, N.345, L.346, L.349
- Ligands: CLA.3, CLA.5, CLA.24, CLA.29, BCR.46, BCR.47
15 PLIP interactions:15 interactions with chain A,- Hydrophobic interactions: A:F.48, A:V.62, A:A.65, A:Q.69, A:L.70, A:I.73, A:I.73, A:F.74, A:L.77, A:W.338, A:W.338, A:Q.341, A:L.342
- Hydrogen bonds: A:N.345
- pi-Stacking: A:H.66
CLA.5: 12 residues within 4Å:- Chain A: H.46, Q.69, I.72, I.73, W.76
- Ligands: CLA.3, CLA.4, CLA.28, CLA.29, LHG.44, BCR.47, BCR.116
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.73, A:W.76, A:W.76, A:W.76
- Salt bridges: A:H.46
CLA.6: 11 residues within 4Å:- Chain A: W.76, S.78, G.79, F.82, H.83, F.87, V.106, W.108
- Ligands: CLA.7, CLA.8, BCR.116
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:F.82, A:F.82, A:F.82, A:F.87, A:W.108
- pi-Stacking: A:H.83, A:H.83
CLA.7: 14 residues within 4Å:- Chain A: M.80, A.104, Q.105, I.127, Q.128, I.129, T.130, S.131, A.658, Y.659
- Ligands: CLA.6, CLA.8, CLA.27, BCR.116
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:I.127, A:T.130, A:A.658, A:Y.659
- Hydrogen bonds: A:T.130, A:S.131, A:S.131
CLA.8: 13 residues within 4Å:- Chain A: V.106, V.107, W.108, I.110, Q.113, L.116
- Chain B: V.441, F.445
- Chain I: I.27
- Ligands: CLA.6, CLA.7, CLA.89, BCR.116
6 PLIP interactions:3 interactions with chain A, 2 interactions with chain B, 1 interactions with chain I,- Hydrophobic interactions: A:V.107, A:I.110, B:V.441, B:F.445, I:I.27
- Hydrogen bonds: A:W.108
CLA.9: 13 residues within 4Å:- Chain A: I.4, V.6, F.67, L.161, F.164, A.165, F.168, H.169, W.179
- Chain M: G.36, G.37
- Ligands: CLA.11, CLA.12
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain M,- Hydrophobic interactions: A:F.67, A:L.161, A:F.164, A:A.165, A:F.168, A:F.168, A:W.179, A:W.179
- Metal complexes: A:H.169
- Hydrogen bonds: M:G.37
CLA.10: 17 residues within 4Å:- Chain A: V.11, K.12, T.13, S.14, F.15, E.17, W.18, H.23, K.61, S.64, L.163, G.166, W.167, Y.170, H.171
- Ligands: CLA.3, CLA.53
16 PLIP interactions:16 interactions with chain A,- Hydrophobic interactions: A:V.11, A:F.15, A:E.17, A:W.18, A:W.18, A:L.163, A:W.167, A:Y.170, A:Y.170
- Hydrogen bonds: A:K.61, A:Y.170
- Salt bridges: A:H.23, A:K.61
- pi-Stacking: A:H.171, A:H.171
- Metal complexes: A:H.171
CLA.11: 12 residues within 4Å:- Chain A: V.2, K.3, W.179, D.182, S.185, H.189, T.303, N.304, W.305
- Ligands: CLA.9, CLA.12, CLA.19
1 PLIP interactions:1 interactions with chain A,- Hydrophobic interactions: A:W.305
CLA.12: 13 residues within 4Å:- Chain A: F.63, H.66, F.67, W.179, F.180, D.182, M.186, H.189, H.190, L.194
- Ligands: CLA.9, CLA.11, CLA.24
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.63, A:W.179, A:W.179, A:F.180, A:M.186, A:L.194
- pi-Stacking: A:H.189
- pi-Cation interactions: A:H.190
CLA.13: 14 residues within 4Å:- Chain A: S.140, G.141, Q.147, T.151, G.198, S.201, W.202, H.205, H.208, V.209, P.229
- Ligands: CLA.14, CLA.15, BCR.46
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.202, A:H.205, A:H.208
- pi-Cation interactions: A:H.205, A:H.205
- Metal complexes: A:H.205
CLA.14: 11 residues within 4Å:- Chain A: L.200, G.204, I.207, H.208, I.233, F.246, G.249
- Chain M: K.220
- Ligands: CLA.13, BCR.46, BCR.54
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain M,- Hydrophobic interactions: A:L.200, A:I.207, A:I.233, A:F.246, A:F.246, M:K.220
- Salt bridges: A:H.208
- pi-Stacking: A:H.208, A:H.208
- Metal complexes: A:H.208
CLA.15: 8 residues within 4Å:- Chain A: Q.147, C.150, L.228, H.230, L.234
- Ligands: CLA.13, BCR.46, CLA.157
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:Q.147, A:H.230, A:L.234
- Salt bridges: A:H.230
- pi-Stacking: A:H.230
CLA.16: 13 residues within 4Å:- Chain A: W.258, S.259, A.262, L.265, H.285, A.289, I.292
- Chain J: V.71, L.75, K.78
- Ligands: CLA.17, CLA.35, CLA.120
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain J,- Hydrophobic interactions: A:W.258, A:W.258, A:L.265, A:I.292, J:V.71, J:L.75
- Salt bridges: J:K.78
CLA.17: 14 residues within 4Å:- Chain A: T.266, F.267, L.278, D.282, I.283, H.285, H.286, A.289, I.290, L.293, H.359, M.363
- Ligands: CLA.16, CLA.18
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:F.267, A:F.267, A:L.278, A:H.285, A:H.286, A:A.289, A:I.290, A:L.293
- Metal complexes: A:H.286
CLA.18: 16 residues within 4Å:- Chain A: L.136, A.139, L.195, G.198, S.199, W.202, Q.206, I.283, H.286, H.287, F.294, P.365, Y.366
- Ligands: CLA.17, CLA.28, BCR.47
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:L.195, A:W.202, A:I.283, A:F.294, A:P.365, A:Y.366
- Salt bridges: A:H.287
- pi-Stacking: A:W.202, A:H.286, A:H.287
- Metal complexes: A:H.287
CLA.19: 13 residues within 4Å:- Chain A: N.188, H.189, H.299, Y.301, T.303, W.305, I.307
- Chain J: L.56, A.57, A.61
- Ligands: CLA.11, BCR.54, BCR.122
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain J,- Hydrogen bonds: A:T.303
- pi-Cation interactions: A:H.299
- Hydrophobic interactions: J:A.57, J:A.61
CLA.20: 14 residues within 4Å:- Chain A: L.187, L.191, L.195, F.294, A.297, M.300, Y.301, L.311, I.314, L.315
- Ligands: CLA.21, CLA.22, CLA.23, CLA.24
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.187, A:L.191, A:L.195, A:F.294, A:A.297
CLA.21: 15 residues within 4Å:- Chain A: I.296, A.297, H.299, M.300, I.307, G.308, H.309
- Chain J: P.27, R.31, K.32, A.33
- Ligands: CLA.20, CLA.22, BCR.54, CLA.123
6 PLIP interactions:3 interactions with chain J, 3 interactions with chain A,- Hydrophobic interactions: J:P.27, J:A.33, A:M.300
- Hydrogen bonds: J:A.33, A:G.308
- Salt bridges: A:H.309
CLA.22: 10 residues within 4Å:- Chain A: H.309, D.313, I.314, A.317, H.318
- Chain J: A.35
- Ligands: CLA.20, CLA.21, CLA.23, CLA.43
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain J,- Hydrophobic interactions: A:I.314, J:A.35
- pi-Stacking: A:H.318, A:H.318
CLA.23: 14 residues within 4Å:- Chain A: I.314, L.315, H.318, H.327, L.330, N.413, L.415, V.419
- Ligands: CLA.20, CLA.22, CLA.24, CLA.30, LHG.45, BCR.48
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:L.330, A:L.415, A:L.415, A:V.419
- Salt bridges: A:H.318
- Metal complexes: A:H.327
CLA.24: 16 residues within 4Å:- Chain A: V.183, M.186, L.187, H.190, L.191, L.311, L.334, T.335, L.344, N.345, M.348
- Ligands: CLA.4, CLA.12, CLA.20, CLA.23, CLA.26
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:V.183, A:V.183, A:L.187, A:L.311, A:T.335, A:L.344, A:N.345, A:M.348
- Hydrogen bonds: A:H.190
CLA.25: 13 residues within 4Å:- Chain A: I.354, V.355, H.358, M.384, I.391, I.533, T.536, V.537, M.589
- Ligands: CLA.26, CLA.36, CLA.38, BCR.49
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.354, A:I.391, A:I.391, A:T.536
- Salt bridges: A:H.358
CLA.26: 17 residues within 4Å:- Chain A: S.351, T.352, V.355, H.358, H.359, Y.361, S.362, M.363, T.495, S.496, T.498, W.499
- Ligands: CLA.24, CLA.25, CLA.34, CLA.36, BCR.49
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:T.495, A:W.499, A:W.499
- pi-Cation interactions: A:H.359
- Metal complexes: A:H.359
CLA.27: 15 residues within 4Å:- Chain A: W.76, S.131, F.133, S.378, T.381, H.382, W.385, I.386, F.389, I.727, T.730, W.731
- Ligands: CLA.7, CLA.28, BCR.50
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:T.381, A:H.382, A:W.385, A:I.386, A:F.389, A:I.727, A:I.727, A:T.730
- pi-Stacking: A:H.382
CLA.28: 17 residues within 4Å:- Chain A: W.76, S.131, G.132, F.133, L.349, T.353, V.356, M.360, Y.366, L.379, H.382, H.383, I.386
- Ligands: CLA.5, CLA.18, CLA.27, BCR.47
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.133, A:L.349, A:V.356, A:L.379, A:I.386
- pi-Stacking: A:H.382
- pi-Cation interactions: A:H.383, A:H.383
CLA.29: 17 residues within 4Å:- Chain A: H.42, A.43, H.46, D.47, L.342, L.346, F.389, G.393, H.397, I.400, R.404, F.561, R.562, W.579
- Ligands: CLA.4, CLA.5, LHG.44
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:H.46, A:L.342, A:L.342
- Hydrogen bonds: A:R.562
- Salt bridges: A:R.562
CLA.30: 13 residues within 4Å:- Chain A: F.322, T.323, L.415, R.418, H.422, I.426, H.429
- Chain K: T.4, P.5
- Ligands: CLA.23, CLA.31, CLA.38, LHG.45
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain K,- Hydrophobic interactions: A:L.415, A:I.426, A:I.426, K:T.4
- Hydrogen bonds: A:R.418
- Salt bridges: A:R.418, A:H.422
- pi-Cation interactions: A:H.422
- Metal complexes: A:H.422
CLA.31: 15 residues within 4Å:- Chain A: H.429, W.432
- Chain B: R.683, T.684, P.685
- Chain K: T.4, V.6, V.12, L.16
- Ligands: CLA.30, CLA.41, LHG.45, BCR.124, CLA.126, BCR.128
8 PLIP interactions:5 interactions with chain K, 3 interactions with chain A,- Hydrophobic interactions: K:V.6, K:V.6, K:V.12, K:L.16, A:W.432
- Hydrogen bonds: K:T.4
- pi-Cation interactions: A:H.429
- Metal complexes: A:H.429
CLA.32: 8 residues within 4Å:- Chain A: W.432, I.435, F.436, F.439, H.440
- Ligands: CLA.33, BCR.112, BCR.124
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:F.439
- pi-Stacking: A:F.436, A:H.440
- Metal complexes: A:H.440
CLA.33: 17 residues within 4Å:- Chain A: F.439, G.443, L.444, I.446, H.447, M.451, R.456, D.459
- Chain B: H.94
- Chain K: T.50, G.51, P.52, R.54
- Ligands: CLA.32, CLA.65, CLA.66, BCR.112
10 PLIP interactions:1 interactions with chain K, 9 interactions with chain A,- Hydrophobic interactions: K:T.50, A:L.444, A:I.446
- Hydrogen bonds: A:R.456, A:R.456, A:D.459
- Salt bridges: A:R.456
- pi-Cation interactions: A:H.447, A:H.447
- Metal complexes: A:H.447
CLA.34: 11 residues within 4Å:- Chain A: I.479, H.480, A.483, P.484, T.487, A.488, T.495, W.499
- Ligands: CLA.26, CLA.36, BCR.49
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:I.479, A:T.487, A:W.499
- Hydrogen bonds: A:T.487, A:T.495
- pi-Cation interactions: A:H.480, A:H.480
- Metal complexes: A:H.480
CLA.35: 4 residues within 4Å:- Chain A: V.486, T.487
- Ligands: CLA.16, CLA.120
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:V.486, A:T.487
- Metal complexes: A:T.487
CLA.36: 17 residues within 4Å:- Chain A: H.358, Y.361, F.472, A.473, V.476, Q.477, W.499, I.516, H.526, H.529, H.599, F.600, M.604
- Ligands: CLA.25, CLA.26, CLA.34, CLA.37
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:Y.361, A:I.516, A:F.600, A:F.600
- Hydrogen bonds: A:Q.477
CLA.37: 13 residues within 4Å:- Chain A: L.437, Q.469, P.470, I.471, F.472, A.473, L.518, F.523, H.526, H.527, H.534
- Ligands: CLA.36, CLA.38
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.437, A:L.437, A:I.471, A:F.472
- Hydrogen bonds: A:F.472, A:A.473
- Salt bridges: A:H.526
- pi-Stacking: A:F.523
- pi-Cation interactions: A:H.527, A:H.527
CLA.38: 10 residues within 4Å:- Chain A: I.426, L.430, V.433, I.533, H.534, V.537
- Ligands: CLA.25, CLA.30, CLA.37, BCR.49
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.426, A:L.430, A:V.433, A:V.537, A:V.537
- Salt bridges: A:H.534
CLA.39: 18 residues within 4Å:- Chain A: I.691, A.694, H.695
- Chain B: S.419, S.422, W.423, L.426
- Chain F: I.97, G.98, G.101, R.102, Y.104
- Ligands: CLA.52, CLA.87, CLA.88, BCR.109, BCR.111, CLA.114
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain F,- pi-Stacking: A:H.695
- Metal complexes: A:H.695
- Hydrophobic interactions: F:Y.104
CLA.40: 12 residues within 4Å:- Chain A: W.39, F.672, F.676, L.709, Q.713, V.717, T.720, H.721, L.724
- Ligands: LHG.44, BCR.50, CLA.55
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:W.39, A:F.672, A:F.676, A:L.709, A:V.717, A:L.724
- Hydrogen bonds: A:Q.713, A:T.720
- pi-Stacking: A:H.721, A:H.721
CLA.41: 15 residues within 4Å:- Chain A: S.428, W.432, I.435
- Chain B: L.677, A.680, H.681, T.684, A.687, I.690
- Ligands: CLA.31, CLA.95, BCR.104, BCR.113, BCR.124, CLA.126
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain A,- Hydrophobic interactions: B:L.677, B:L.677, B:T.684, B:A.687, B:I.690, A:I.435
- pi-Stacking: B:H.681, B:H.681
CLA.43: 8 residues within 4Å:- Chain A: H.318, K.319, G.320, P.321, F.322
- Ligands: CLA.22, LHG.45, BCR.48
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:H.318, A:P.321, A:F.322
CLA.52: 20 residues within 4Å:- Chain A: T.35, I.38, W.39, I.688, I.691, V.692, H.695, V.700, P.702, P.706, R.707
- Chain F: E.118, I.121
- Chain I: A.11, L.14, S.15, L.17, W.18
- Ligands: CLA.39, CLA.53
15 PLIP interactions:8 interactions with chain A, 6 interactions with chain I, 1 interactions with chain F,- Hydrophobic interactions: A:T.35, A:I.38, A:W.39, A:I.688, A:I.691, A:V.692, A:V.700, A:P.706, I:L.14, I:L.14, I:L.14, I:L.17, I:W.18, I:W.18, F:I.121
CLA.53: 12 residues within 4Å:- Chain A: P.21, W.37, I.38, L.41, H.42
- Chain I: A.11, P.12
- Ligands: CLA.3, CLA.10, LHG.44, BCR.51, CLA.52
7 PLIP interactions:1 interactions with chain I, 6 interactions with chain A,- Hydrophobic interactions: I:P.12, A:P.21, A:W.37, A:I.38, A:L.41
- pi-Stacking: A:H.42
- Metal complexes: A:H.42
CLA.55: 25 residues within 4Å:- Chain A: F.668, A.671, F.672, L.674, M.675, F.678, Y.683, W.684, L.687
- Chain B: S.422, S.425, L.426, G.429, F.430, L.433, L.524, L.531, I.532, L.577, F.580, W.581
- Ligands: CLA.40, BCR.50, CLA.57, BCR.109
18 PLIP interactions:9 interactions with chain B, 9 interactions with chain A,- Hydrophobic interactions: B:F.430, B:L.433, B:I.532, B:L.577, B:L.577, B:F.580, A:F.668, A:A.671, A:F.672, A:L.674, A:F.678, A:Y.683, A:W.684
- Hydrogen bonds: B:G.429, A:Y.683
- pi-Stacking: B:W.581, B:W.581, A:F.672
CLA.57: 12 residues within 4Å:- Chain A: L.664, H.667, F.668
- Chain B: F.580, W.581, N.584, W.588, L.615, L.619
- Ligands: CL0.1, CLA.55, CLA.58
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:W.581, B:W.581, B:N.584, B:L.615, A:L.664, A:F.668
- pi-Stacking: B:W.588
- Salt bridges: A:H.667
CLA.58: 12 residues within 4Å:- Chain A: W.642
- Chain B: L.623, I.631, F.649, H.653, W.656, Y.716, Y.720, F.723
- Ligands: CL0.1, CLA.2, CLA.57
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.623, B:I.631, B:F.649, B:W.656, B:W.656, B:Y.716
- pi-Stacking: B:F.649, B:H.653
- Metal complexes: B:H.653
CLA.59: 13 residues within 4Å:- Chain A: I.539, L.584, F.587, W.588
- Chain B: L.654, A.657, T.658, F.660, M.661, Y.669, W.670
- Ligands: CLA.2, BCR.104
10 PLIP interactions:4 interactions with chain A, 6 interactions with chain B,- Hydrophobic interactions: A:I.539, A:L.584, A:F.587, B:L.654, B:A.657, B:F.660, B:Y.669, B:W.670
- pi-Stacking: A:W.588, B:W.670
CLA.60: 10 residues within 4Å:- Chain B: F.7, G.23, I.24, A.27, H.28, S.48
- Ligands: CLA.61, CLA.62, CLA.85, DGD.105
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:I.24, B:A.27
- Salt bridges: B:H.33
CLA.61: 14 residues within 4Å:- Chain B: H.28, F.30, I.45, S.48, H.49, Q.52, I.329, H.330, L.333, A.336, L.340
- Ligands: CLA.60, CLA.62, CLA.85
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:F.30, B:I.45, B:Q.52, B:I.329, B:L.333, B:L.333
- pi-Stacking: B:H.49
- Metal complexes: B:H.49
CLA.62: 10 residues within 4Å:- Chain B: H.28, Q.52, I.55, I.56, W.59, L.340
- Ligands: CLA.60, CLA.61, CLA.85, DGD.105
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:I.56, B:W.59, B:L.340
- Salt bridges: B:H.28
CLA.63: 16 residues within 4Å:- Chain B: L.58, G.62, F.65, H.66, W.69, Q.70, H.88, A.89
- Chain H: L.2, P.3, F.6, V.7, V.10
- Ligands: CLA.64, CLA.65, BCR.112
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain H,- Hydrophobic interactions: B:F.65, B:F.65, H:F.6, H:V.10
- Hydrogen bonds: B:Q.70
- Salt bridges: B:H.66
- Metal complexes: B:H.66
CLA.64: 17 residues within 4Å:- Chain B: N.63, H.66, V.67, A.87, H.88, N.113, I.114, A.115, Y.116, S.117, W.645, M.648, F.718
- Ligands: CLA.63, CLA.65, CLA.83, BCR.104
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:W.645, B:F.718
- Hydrogen bonds: B:Y.116, B:S.117, B:S.117
CLA.65: 21 residues within 4Å:- Chain A: T.450, A.453, L.454
- Chain B: H.88, A.89, I.90, W.91, D.92, P.93, H.94, N.113, S.643, V.644, W.647
- Chain H: V.7
- Ligands: CLA.33, CLA.63, CLA.64, CLA.66, BCR.104, BCR.112
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:W.647, A:T.450, A:L.454
- Hydrogen bonds: B:W.91, B:N.113
- pi-Stacking: B:H.94
- Metal complexes: B:D.92
CLA.66: 11 residues within 4Å:- Chain B: P.93, H.94
- Chain H: P.8, G.11, L.12
- Chain K: F.47, P.52
- Ligands: CLA.33, CLA.65, BCR.112, BCR.124
5 PLIP interactions:2 interactions with chain B, 2 interactions with chain H, 1 interactions with chain K,- Hydrophobic interactions: B:P.93, H:L.12, H:L.12, K:P.52
- Metal complexes: B:H.94
CLA.67: 10 residues within 4Å:- Chain B: F.46, F.50, A.151, L.154, H.155, K.159, W.160, W.166
- Ligands: CLA.68, CLA.69
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:F.46, B:F.50, B:A.151, B:L.154, B:W.166
- pi-Stacking: B:W.160
CLA.68: 9 residues within 4Å:- Chain B: W.166, N.169, S.172, H.176, N.293, F.294
- Ligands: CLA.67, CLA.69, CLA.76
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:N.293, B:F.294
- pi-Stacking: B:H.176
- pi-Cation interactions: B:H.176
- Metal complexes: B:H.176
CLA.69: 15 residues within 4Å:- Chain B: F.46, H.49, F.50, W.166, F.167, N.169, S.172, R.173, H.176, H.177, G.180, L.181
- Ligands: CLA.67, CLA.68, BCR.100
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.46, B:W.166, B:W.166, B:F.167, B:R.173, B:L.181
- Salt bridges: B:H.49
CLA.70: 13 residues within 4Å:- Chain B: I.126, S.185, A.188, W.189, G.191, H.192, H.195, V.196, R.207, W.208, F.211
- Ligands: CLA.71, BCR.101
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:I.126, B:A.188, B:W.189, B:W.189, B:W.189, B:H.192, B:V.196, B:W.208, B:W.208, B:F.211, B:F.211
- Hydrogen bonds: B:R.207, B:W.208
- pi-Stacking: B:W.208, B:W.208
CLA.71: 17 residues within 4Å:- Chain B: L.187, A.188, T.190, G.191, V.194, H.195, F.211, L.212, L.215, P.216, G.220, L.221, Y.232, L.277
- Ligands: CLA.70, BCR.99, BCR.101
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.187, B:T.190, B:V.194, B:L.277
- pi-Stacking: B:H.195, B:H.195
- pi-Cation interactions: B:H.195
CLA.72: 12 residues within 4Å:- Chain B: W.229, N.230, Y.232, A.233, L.256, H.274, L.277, A.278, F.281, I.282, L.491
- Ligands: CLA.73
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.229, B:W.229, B:Y.232, B:L.277, B:L.277, B:A.278, B:F.281, B:I.282
- pi-Stacking: B:H.274
CLA.73: 12 residues within 4Å:- Chain B: L.256, D.271, M.272, H.274, H.275, I.279, H.350, M.351, L.354
- Ligands: CLA.72, CLA.74, CLA.82
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:D.271, B:H.274, B:H.275, B:I.279, B:L.354
- Hydrogen bonds: B:H.350
- pi-Cation interactions: B:H.275, B:H.275
- Metal complexes: B:H.275
CLA.74: 18 residues within 4Å:- Chain B: W.122, I.126, S.185, S.186, W.189, M.272, H.275, H.276, I.279, F.283, L.346, V.347, H.350, M.351, P.356, Y.357
- Ligands: CLA.73, CLA.84
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:W.189, B:W.189, B:I.279, B:F.283, B:L.346, B:V.347, B:P.356
- pi-Stacking: B:W.189, B:H.275
- Metal complexes: B:H.276
CLA.75: 14 residues within 4Å:- Chain B: L.174, L.178, F.182, F.283, A.286, M.289, Y.290, I.300, L.303
- Ligands: CLA.77, CLA.78, CLA.79, CLA.80, BCR.103
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.174, B:L.178, B:F.182, B:F.283, B:A.286
- Hydrogen bonds: B:Y.290
CLA.76: 9 residues within 4Å:- Chain B: H.176, S.179, L.284, H.288, T.292, F.294, I.296
- Ligands: CLA.68, BCR.99
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:L.284, B:F.294, B:F.294
- Hydrogen bonds: B:T.292
- pi-Stacking: B:H.288
CLA.77: 9 residues within 4Å:- Chain B: I.285, H.288, M.289, I.296, G.297, H.298
- Ligands: CLA.75, CLA.78, BCR.99
3 PLIP interactions:3 interactions with chain B,- Hydrogen bonds: B:G.297
- Salt bridges: B:H.298
- pi-Stacking: B:H.298
CLA.78: 9 residues within 4Å:- Chain B: H.298, D.302, L.303, A.306
- Ligands: CLA.75, CLA.77, CLA.79, CLA.97, BCR.102
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:L.303
- pi-Cation interactions: B:H.307
CLA.79: 14 residues within 4Å:- Chain B: L.304, H.307, H.318, L.321, I.325, V.406, M.410
- Ligands: CLA.75, CLA.78, CLA.80, CLA.86, CLA.97, BCR.102, LHG.106
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.304, B:L.321, B:I.325, B:V.406
- Salt bridges: B:H.307
- Metal complexes: B:H.318
CLA.80: 13 residues within 4Å:- Chain B: A.170, R.173, L.174, H.177, F.182, F.283, N.326, L.335, A.336, S.339, I.343
- Ligands: CLA.75, CLA.79
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:A.170, B:F.283, B:A.336, B:I.343, B:I.343
- Salt bridges: B:H.177
CLA.81: 14 residues within 4Å:- Chain B: S.345, L.346, Q.349, Q.375, M.382, F.386, L.526, T.530, M.582, I.586
- Ligands: CLA.82, CLA.92, CLA.94, BCR.103
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:M.382, B:F.386, B:T.530, B:I.586
- Hydrogen bonds: B:S.345, B:Q.375
CLA.82: 9 residues within 4Å:- Chain B: H.350, S.353, L.507, F.508
- Ligands: CLA.73, CLA.81, CLA.90, CLA.92, BCR.103
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:L.507, B:F.508
- pi-Cation interactions: B:H.350
- Metal complexes: B:H.350
CLA.83: 16 residues within 4Å:- Chain B: W.59, N.63, S.117, A.369, L.370, T.372, H.373, Y.376, I.377, F.380, I.717, F.718, Y.720, A.721
- Ligands: CLA.64, CLA.84
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:A.369, B:L.370, B:T.372, B:H.373, B:Y.376, B:Y.376, B:I.377, B:F.380, B:I.717, B:F.718, B:Y.720, B:A.721
CLA.84: 12 residues within 4Å:- Chain B: S.117, G.118, L.340, T.344, V.347, Y.357, L.370, H.373, H.374
- Ligands: CLA.74, CLA.83, BCR.100
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.340, B:V.347, B:L.370
- pi-Stacking: B:H.373, B:H.374, B:H.374
- Metal complexes: B:H.374
CLA.85: 18 residues within 4Å:- Chain B: I.24, A.25, H.28, D.29, L.337, F.380, G.384, H.388, I.391, R.395, Y.554, W.572, F.575
- Ligands: CLA.60, CLA.61, CLA.62, CLA.96, DGD.105
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:D.29, B:L.337, B:F.575, B:F.575
- Hydrogen bonds: B:H.28, B:D.29
- Salt bridges: B:R.395
- pi-Stacking: B:H.388
- Metal complexes: B:H.388
CLA.86: 10 residues within 4Å:- Chain B: R.313, L.314, R.409, M.410, H.413, I.417, H.420
- Ligands: CLA.79, CLA.87, BCR.102
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.314, B:I.417, B:H.420
- Hydrogen bonds: B:R.409
- Salt bridges: B:R.409, B:H.413
- pi-Cation interactions: B:H.413
CLA.87: 10 residues within 4Å:- Chain A: A.694, K.697, L.698
- Chain B: H.420, W.423
- Chain F: V.150
- Ligands: CLA.39, CLA.86, CLA.94, BCR.111
5 PLIP interactions:2 interactions with chain A, 1 interactions with chain F, 2 interactions with chain B,- Hydrophobic interactions: A:L.698, F:V.150
- Salt bridges: A:K.697
- pi-Stacking: B:H.420
- Metal complexes: B:H.420
CLA.88: 12 residues within 4Å:- Chain B: W.423, L.426, F.427, F.430, H.431
- Chain F: F.83, G.87, F.90
- Ligands: CLA.39, BCR.50, CLA.89, BCR.109
5 PLIP interactions:1 interactions with chain F, 4 interactions with chain B,- Hydrophobic interactions: F:F.83, B:F.430
- pi-Stacking: B:F.427, B:H.431, B:H.431
CLA.89: 17 residues within 4Å:- Chain A: V.111
- Chain B: G.434, L.435, V.437, H.438, M.442, K.450, I.452
- Chain I: N.30, D.35, A.36
- Ligands: CLA.8, BCR.50, CLA.88, BCR.109, BCR.116, DGD.117
12 PLIP interactions:1 interactions with chain A, 9 interactions with chain B, 2 interactions with chain I,- Hydrophobic interactions: A:V.111, B:L.435, B:V.437, B:V.437, B:H.438, B:I.452, I:A.36
- Hydrogen bonds: B:K.450, I:N.30
- Salt bridges: B:H.438, B:K.450
- Metal complexes: B:H.438
CLA.90: 9 residues within 4Å:- Chain B: W.461, H.466, L.476, L.477, W.492, W.496
- Ligands: CLA.82, CLA.91, BCR.103
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:W.461, B:L.476
CLA.91: 6 residues within 4Å:- Chain B: L.476, P.483, A.484, A.487, W.492
- Ligands: CLA.90
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:L.476, B:P.483, B:A.484
CLA.92: 15 residues within 4Å:- Chain B: Q.349, Y.352, Y.371, I.462, Q.463, F.508, L.509, H.519, I.522, V.589, Y.592, W.593
- Ligands: CLA.81, CLA.82, CLA.94
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:I.522, B:V.589, B:V.589, B:Y.592, B:Y.592, B:W.593
- Hydrogen bonds: B:Q.463
- Salt bridges: B:H.466
- pi-Stacking: B:H.519
CLA.93: 16 residues within 4Å:- Chain B: F.427, L.428, E.455, P.456, I.457, F.458, A.459, F.516, H.519, H.520, A.523, H.527
- Chain F: F.83
- Ligands: CLA.94, BCR.111, DGD.117
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain F,- Hydrophobic interactions: B:F.427, B:F.427, B:F.427, B:L.428, B:L.428, B:F.458, B:A.523, F:F.83, F:F.83
- Hydrogen bonds: B:F.458, B:A.459
- Salt bridges: B:H.519
- pi-Stacking: B:F.458, B:F.516
- Metal complexes: B:H.520
CLA.94: 10 residues within 4Å:- Chain B: I.417, W.423, A.523, L.526, H.527, T.530
- Ligands: CLA.81, CLA.87, CLA.92, CLA.93
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:I.417, B:W.423
- Salt bridges: B:H.527
- pi-Stacking: B:H.527
- Metal complexes: B:H.527
CLA.95: 18 residues within 4Å:- Chain B: T.17, I.20, W.21, I.674, L.677, A.678, H.681, I.690, R.691, W.692, R.693, D.694, P.696, V.697
- Chain H: F.23, Q.27
- Chain K: Y.81
- Ligands: CLA.41
9 PLIP interactions:8 interactions with chain B, 1 interactions with chain H,- Hydrophobic interactions: B:T.17, B:I.20, B:W.21, B:I.674, B:W.692, B:P.696, B:P.696, H:F.23
- Hydrogen bonds: B:R.693
CLA.96: 14 residues within 4Å:- Chain B: W.21, F.651, L.654, V.655, T.658, F.662, L.699, V.707, A.710, H.711
- Ligands: CLA.85, PQN.98, BCR.104, DGD.105
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.651, B:L.654, B:V.655, B:F.662, B:L.699, B:V.707
- pi-Stacking: B:H.711
CLA.97: 13 residues within 4Å:- Chain B: A.306, H.307, T.308, P.309, P.310
- Chain L: L.27, N.33, R.36, F.37
- Ligands: CLA.78, CLA.79, LHG.106, CLA.136
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain L,- Hydrophobic interactions: B:P.309, L:L.27, L:F.37
CLA.110: 6 residues within 4Å:- Chain B: F.458, W.461
- Chain F: S.74, G.75, D.76
- Ligands: BCR.111
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain B,- Hydrophobic interactions: F:D.76, B:F.458, B:W.461, B:W.461
CLA.114: 9 residues within 4Å:- Chain F: I.93, W.96, I.130
- Chain I: W.18, F.19, L.22, L.25
- Ligands: CLA.39, BCR.109
7 PLIP interactions:5 interactions with chain I, 2 interactions with chain F,- Hydrophobic interactions: I:W.18, I:F.19, I:L.22, I:L.25, F:I.93, F:I.130
- pi-Stacking: I:W.18
CLA.115: 4 residues within 4Å:- Chain I: E.28, R.31, L.32
- Ligands: BCR.51
4 PLIP interactions:4 interactions with chain I,- Hydrophobic interactions: I:E.28, I:L.32
- Salt bridges: I:R.31
- pi-Cation interactions: I:R.31
CLA.119: 8 residues within 4Å:- Chain J: R.22, G.49, D.50, P.51, F.54, T.59
- Chain M: F.5
- Ligands: BCR.122
5 PLIP interactions:4 interactions with chain J, 1 interactions with chain M,- Hydrophobic interactions: J:R.22, J:R.22, J:P.51, J:T.59, M:F.5
CLA.120: 7 residues within 4Å:- Chain J: I.68, M.69, G.72, I.73, K.78
- Ligands: CLA.16, CLA.35
4 PLIP interactions:4 interactions with chain J,- Hydrophobic interactions: J:I.68, J:I.73, J:K.78
- Salt bridges: J:K.78
CLA.121: 8 residues within 4Å:- Chain A: F.254, L.256
- Chain J: T.6, N.7, M.10, V.11, H.67
- Ligands: BCR.122
5 PLIP interactions:4 interactions with chain J, 1 interactions with chain A,- Hydrophobic interactions: J:V.11, A:L.256
- Hydrogen bonds: J:N.7
- pi-Stacking: J:H.67, J:H.67
CLA.123: 9 residues within 4Å:- Chain J: L.16, L.25, P.27, G.36, L.37, K.38, M.69
- Ligands: CLA.21, BCR.54
5 PLIP interactions:5 interactions with chain J,- Hydrophobic interactions: J:L.16, J:P.27, J:K.38
- Hydrogen bonds: J:K.38
- pi-Cation interactions: J:K.38
CLA.125: 8 residues within 4Å:- Chain G: Q.2
- Chain K: Y.15, N.18, R.23, E.34, L.37
- Ligands: CLA.126, BCR.128
2 PLIP interactions:2 interactions with chain K,- Hydrophobic interactions: K:Y.15, K:L.37
CLA.126: 15 residues within 4Å:- Chain B: L.686
- Chain K: V.6, Y.15, L.19, P.20, A.21, V.35, A.38, H.39, L.42
- Ligands: CLA.31, CLA.41, BCR.113, BCR.124, CLA.125
7 PLIP interactions:6 interactions with chain K, 1 interactions with chain B,- Hydrophobic interactions: K:V.6, K:A.21, K:V.35, K:L.42, B:L.686
- Hydrogen bonds: K:A.21
- pi-Cation interactions: K:H.39
CLA.127: 8 residues within 4Å:- Chain K: Y.41, L.42, G.45, P.46, L.49, L.137, Y.144, F.145
7 PLIP interactions:7 interactions with chain K,- Hydrophobic interactions: K:Y.41, K:L.42, K:P.46, K:L.49, K:L.137
- Hydrogen bonds: K:Y.41, K:F.145
CLA.132: 14 residues within 4Å:- Chain L: R.46, Y.121, P.122, G.123, F.126, F.131, F.138, L.141, K.142, K.144, E.145
- Ligands: LUT.129, CLA.133, CLA.141
14 PLIP interactions:14 interactions with chain L,- Hydrophobic interactions: L:R.46, L:Y.121, L:P.122, L:F.126, L:F.131, L:L.141, L:K.142, L:K.144, L:E.145, L:E.145
- Hydrogen bonds: L:G.123
- pi-Stacking: L:Y.121
- pi-Cation interactions: L:R.46, L:R.46
CLA.133: 6 residues within 4Å:- Chain L: L.141, K.144, N.148
- Ligands: LUT.129, CLA.132, CLA.138
4 PLIP interactions:4 interactions with chain L,- Hydrophobic interactions: L:L.141, L:K.144
- Salt bridges: L:K.137, L:K.144
CLA.134: 13 residues within 4Å:- Chain L: L.154, V.157, G.158, V.161, Q.162, Y.166, H.178, N.186, I.187, I.190
- Ligands: LUT.129, CLA.139, LHG.144
3 PLIP interactions:3 interactions with chain L,- Hydrophobic interactions: L:V.161, L:I.187, L:I.187
CLA.135: 14 residues within 4Å:- Chain L: L.12, P.17, G.18, D.19, F.20, G.21, F.22, F.34, F.37, K.38, E.41, R.150
- Ligands: LUT.130, CHL.145
12 PLIP interactions:12 interactions with chain L,- Hydrophobic interactions: L:F.22, L:F.34, L:K.38, L:E.41, L:E.41, L:R.150, L:R.150
- Hydrogen bonds: L:F.20, L:F.22
- pi-Stacking: L:F.22
- pi-Cation interactions: L:R.150
- Metal complexes: L:E.41
CLA.136: 6 residues within 4Å:- Chain L: S.40, H.44
- Ligands: CLA.97, BCR.102, LUT.130, CHL.142
3 PLIP interactions:3 interactions with chain L,- Salt bridges: L:R.36
- pi-Cation interactions: L:H.44
- Metal complexes: L:H.44
CLA.137: 13 residues within 4Å:- Chain L: L.50, P.53, G.54, V.57, P.58, L.63, A.69, T.81, Y.82, L.83
- Ligands: LUT.130, BCR.131, CLA.143
2 PLIP interactions:2 interactions with chain L,- Hydrophobic interactions: L:P.53
- Hydrogen bonds: L:L.83
CLA.138: 8 residues within 4Å:- Chain L: E.140, K.144, K.147, N.148, L.151
- Ligands: CLA.133, LHG.144, BCR.162
6 PLIP interactions:6 interactions with chain L,- Hydrophobic interactions: L:K.147, L:L.151, L:L.151
- Salt bridges: L:K.144, L:K.147
- pi-Cation interactions: L:K.147
CLA.139: 8 residues within 4Å:- Chain L: H.178, L.179, P.182, W.183, N.186, I.187
- Chain N: V.91
- Ligands: CLA.134
2 PLIP interactions:2 interactions with chain L,- Hydrophobic interactions: L:L.179, L:P.182
CLA.141: 10 residues within 4Å:- Chain L: Y.43, R.46, W.47, Q.109, R.110, P.122, A.125, F.126
- Ligands: LUT.129, CLA.132
8 PLIP interactions:8 interactions with chain L,- Hydrophobic interactions: L:R.110, L:R.110, L:P.122, L:F.126, L:F.126, L:F.126
- Salt bridges: L:R.110
- pi-Stacking: L:F.126
CLA.143: 9 residues within 4Å:- Chain L: Q.70, A.80, I.95, I.98, E.99, I.103
- Ligands: BCR.131, CLA.137, CHL.142
5 PLIP interactions:5 interactions with chain L,- Hydrophobic interactions: L:Q.70, L:A.80, L:I.95, L:I.95, L:I.103
CLA.149: 10 residues within 4Å:- Chain M: R.53, M.56, Y.148, P.149, G.150, F.154, N.155, L.170
- Ligands: LUT.146, CHL.158
3 PLIP interactions:3 interactions with chain M,- Hydrophobic interactions: M:R.53, M:Y.148
- Hydrogen bonds: M:G.150
CLA.150: 1 residues within 4Å:- Ligands: LUT.146
0 PLIP interactions:CLA.151: 11 residues within 4Å:- Chain M: L.183, A.184, G.187, L.190, Q.191, T.195, N.202, H.206, N.214
- Ligands: LUT.146, CLA.156
4 PLIP interactions:4 interactions with chain M,- Hydrophobic interactions: M:L.183, M:Q.191
- Hydrogen bonds: M:N.214
- Salt bridges: M:H.206
CLA.152: 15 residues within 4Å:- Chain M: L.14, L.18, G.20, D.21, F.22, G.23, F.24, L.44, A.45, E.48, N.51, R.179, M.182
- Ligands: LUT.147, CLA.153
14 PLIP interactions:14 interactions with chain M,- Hydrophobic interactions: M:L.18, M:F.22, M:F.24, M:F.24, M:L.44, M:N.51, M:R.179, M:M.182
- Hydrogen bonds: M:F.22, M:G.23, M:F.24
- Salt bridges: M:R.179
- pi-Cation interactions: M:R.179
- Metal complexes: M:E.48
CLA.153: 5 residues within 4Å:- Chain M: W.43, F.185
- Ligands: LUT.147, CLA.152, CLA.159
1 PLIP interactions:1 interactions with chain M,- Hydrophobic interactions: M:F.185
CLA.154: 10 residues within 4Å:- Chain M: G.61, A.64, P.65, V.74, T.78, Y.96, W.97
- Ligands: LUT.147, BCR.148, CLA.160
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:A.64, M:V.74, M:W.97
- Hydrogen bonds: M:T.78, M:Y.96
CLA.155: 4 residues within 4Å:- Chain M: K.173, K.176, N.177, L.180
2 PLIP interactions:2 interactions with chain M,- Hydrophobic interactions: M:K.176, M:L.180
CLA.156: 5 residues within 4Å:- Chain M: H.206, P.210, N.213, I.215
- Ligands: CLA.151
2 PLIP interactions:2 interactions with chain M,- Hydrophobic interactions: M:P.210
- Hydrogen bonds: M:N.213
CLA.157: 9 residues within 4Å:- Chain M: A.87, I.88, P.89, Y.101, F.104, E.107
- Ligands: CLA.15, LUT.147, CLA.160
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:I.88, M:P.89, M:F.104, M:F.104
- Metal complexes: M:A.87
CLA.159: 14 residues within 4Å:- Chain M: W.43, Y.46, G.47, F.50, N.51, T.54, I.111, G.112, E.115, H.116, R.118, L.119
- Ligands: CLA.153, CLA.161
6 PLIP interactions:6 interactions with chain M,- Hydrophobic interactions: M:F.50, M:I.111, M:E.115, M:L.119
- Salt bridges: M:R.118
- pi-Stacking: M:F.50
CLA.160: 11 residues within 4Å:- Chain M: A.87, Y.96, L.103, F.106, E.107, L.110, I.111
- Ligands: LUT.147, BCR.148, CLA.154, CLA.157
6 PLIP interactions:6 interactions with chain M,- Hydrophobic interactions: M:A.87, M:Y.96, M:L.103, M:L.103, M:L.110, M:I.111
CLA.161: 5 residues within 4Å:- Chain M: H.116, L.119
- Chain O: F.14
- Ligands: CLA.159, CHL.196
3 PLIP interactions:1 interactions with chain O, 2 interactions with chain M,- Hydrophobic interactions: O:F.14, M:L.119
- Metal complexes: M:H.116
CLA.165: 15 residues within 4Å:- Chain N: R.48, M.51, L.52, Y.132, P.133, F.137, N.138, P.144, N.148, K.149, K.151, E.152
- Ligands: LUT.163, CLA.166, CHL.175
11 PLIP interactions:11 interactions with chain N,- Hydrophobic interactions: N:R.48, N:R.48, N:M.51, N:P.133, N:F.137, N:N.148, N:K.149, N:K.151, N:E.152, N:E.152
- pi-Cation interactions: N:R.48
CLA.166: 5 residues within 4Å:- Chain N: K.151, N.155
- Ligands: LUT.163, CLA.165, CLA.171
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:K.151
- Salt bridges: N:K.151, N:K.151
CLA.167: 13 residues within 4Å:- Chain N: L.161, A.162, G.165, V.168, Q.169, N.180, L.181, H.184, T.192, I.193, T.196
- Ligands: LUT.163, CLA.172
8 PLIP interactions:8 interactions with chain N,- Hydrophobic interactions: N:A.162, N:V.168, N:Q.169, N:L.181, N:I.193, N:I.193
- Hydrogen bonds: N:Q.169, N:I.193
CLA.168: 19 residues within 4Å:- Chain N: L.14, A.19, G.20, D.21, N.22, G.23, F.24, L.29, A.30, F.39, V.40, A.42, E.43, N.46, R.157, M.160
- Ligands: XAT.164, CLA.169, CLA.173
18 PLIP interactions:18 interactions with chain N,- Hydrophobic interactions: N:L.14, N:F.24, N:F.24, N:L.29, N:F.39, N:F.39, N:V.40, N:A.42, N:E.43, N:N.46, N:R.157, N:R.157, N:M.160
- Hydrogen bonds: N:N.22, N:F.24, N:A.30
- Salt bridges: N:R.157
- pi-Cation interactions: N:R.157
CLA.169: 7 residues within 4Å:- Chain N: A.42, N.46, F.163, L.164
- Ligands: XAT.164, CLA.168, CLA.176
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:A.42, N:F.163, N:L.164
CLA.170: 8 residues within 4Å:- Chain N: A.55, G.56, A.71, A.77, Y.82
- Ligands: BCR.162, XAT.164, CHL.177
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:A.55, N:A.77, N:Y.82
CLA.171: 6 residues within 4Å:- Chain N: E.150, K.151, A.154, N.155
- Ligands: CLA.166, BCR.182
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:K.151, N:A.154
- Hydrogen bonds: N:N.155
CLA.172: 8 residues within 4Å:- Chain N: L.181, H.184, P.188, W.189, T.192, I.194
- Chain O: T.101
- Ligands: CLA.167
7 PLIP interactions:6 interactions with chain N, 1 interactions with chain O,- Hydrophobic interactions: N:L.181, N:P.188, N:W.189, O:T.101
- Hydrogen bonds: N:T.192
- pi-Cation interactions: N:H.184
- Metal complexes: N:H.184
CLA.173: 10 residues within 4Å:- Chain N: W.4, L.5, P.6, N.22, F.24
- Chain O: W.108, R.112, M.115
- Ligands: CLA.168, BCR.182
7 PLIP interactions:5 interactions with chain N, 2 interactions with chain O,- Hydrophobic interactions: N:W.4, N:P.6, N:F.24, N:F.24, O:W.108
- pi-Stacking: N:W.4, O:W.108
CLA.176: 11 residues within 4Å:- Chain N: W.38, A.42, V.45, N.46, F.97, H.98, E.101, R.104, W.105
- Ligands: CLA.169, CLA.178
12 PLIP interactions:12 interactions with chain N,- Hydrophobic interactions: N:V.45, N:V.45, N:F.97, N:H.98, N:E.101, N:E.101, N:W.105
- Hydrogen bonds: N:N.46
- Salt bridges: N:R.104
- pi-Cation interactions: N:R.104, N:R.104
- Metal complexes: N:E.101
CLA.178: 7 residues within 4Å:- Chain N: F.94, H.98, I.102, W.105
- Ligands: LHG.144, CHL.145, CLA.176
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:F.94, N:W.105
- Salt bridges: N:H.98
- pi-Cation interactions: N:H.98
- Metal complexes: N:H.98
CLA.183: 16 residues within 4Å:- Chain O: R.57, M.60, L.61, Y.141, P.142, G.143, F.147, D.148, W.152, G.153, L.163, R.164, E.167
- Ligands: LUT.180, CLA.184, CHL.192
10 PLIP interactions:10 interactions with chain O,- Hydrophobic interactions: O:R.57, O:M.60, O:L.61, O:F.147, O:R.164, O:E.167, O:E.167
- Hydrogen bonds: O:G.143, O:D.148
- pi-Cation interactions: O:R.57
CLA.184: 7 residues within 4Å:- Chain O: L.67, K.166, N.170, L.173
- Ligands: LUT.180, CLA.183, CLA.189
5 PLIP interactions:5 interactions with chain O,- Hydrophobic interactions: O:L.67, O:K.166, O:L.173
- Salt bridges: O:K.166, O:K.166
CLA.185: 14 residues within 4Å:- Chain O: L.176, V.179, G.180, F.183, Q.184, Y.187, T.188, N.195, H.199, N.207, I.208
- Ligands: LUT.180, CLA.190, LHG.195
6 PLIP interactions:6 interactions with chain O,- Hydrophobic interactions: O:V.179, O:F.183, O:Q.184, O:Y.187, O:I.208
- Hydrogen bonds: O:I.208
CLA.186: 20 residues within 4Å:- Chain O: L.23, G.29, D.30, F.31, G.32, F.33, D.34, F.38, F.48, A.49, A.51, E.52, H.55, R.172, M.175, L.176
- Ligands: XAT.181, CLA.187, LHG.195, CHL.196
16 PLIP interactions:16 interactions with chain O,- Hydrophobic interactions: O:F.33, O:F.38, O:F.38, O:F.48, O:A.51, O:E.52, O:R.172, O:M.175, O:L.176
- Hydrogen bonds: O:D.30, O:F.31, O:G.32, O:F.33
- Salt bridges: O:R.172
- pi-Cation interactions: O:R.172, O:R.172
CLA.187: 5 residues within 4Å:- Chain O: H.55, F.178
- Ligands: XAT.181, CLA.186, CLA.193
2 PLIP interactions:2 interactions with chain O,- Hydrophobic interactions: O:F.178
- pi-Stacking: O:H.55
CLA.188: 10 residues within 4Å:- Chain O: L.61, A.62, A.64, G.65, I.68, R.89, Y.91
- Ligands: XAT.181, BCR.182, CHL.194
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:A.64, O:I.68, O:Y.91
- Salt bridges: O:R.89
CLA.189: 8 residues within 4Å:- Chain M: Y.132
- Chain O: V.162, K.166, K.169, N.170
- Ligands: BCR.148, CLA.184, LHG.195
9 PLIP interactions:1 interactions with chain M, 8 interactions with chain O,- Hydrophobic interactions: M:Y.132, O:K.169
- Hydrogen bonds: O:K.166, O:K.169
- Salt bridges: O:K.166, O:K.166, O:K.169
- pi-Cation interactions: O:K.169, O:K.169
CLA.190: 8 residues within 4Å:- Chain M: T.102, F.106
- Chain O: H.199, P.203, N.207, F.209
- Ligands: LUT.180, CLA.185
4 PLIP interactions:1 interactions with chain O, 3 interactions with chain M,- Metal complexes: O:H.199
- Hydrophobic interactions: M:F.106, M:F.106, M:F.106
CLA.193: 12 residues within 4Å:- Chain O: W.47, A.51, M.54, H.55, W.58, M.103, M.106, G.107, E.110, R.113, W.114
- Ligands: CLA.187
5 PLIP interactions:5 interactions with chain O,- Hydrophobic interactions: O:M.54, O:W.114
- Salt bridges: O:R.113
- pi-Cation interactions: O:R.113, O:R.113
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.42: 9 residues within 4Å:- Chain A: M.675, F.676, S.679, G.680, W.684, A.708, L.709, G.714
- Ligands: BCR.109
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:F.676, A:F.676, A:W.684, A:L.709
- Hydrogen bonds: A:S.679, A:L.709
- pi-Stacking: A:W.684
PQN.98: 10 residues within 4Å:- Chain B: M.661, F.662, S.665, W.670, A.698, L.699, S.700, A.704
- Ligands: CLA.96, BCR.104
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:F.662, B:F.662, B:L.699, B:A.704
- Hydrogen bonds: B:L.699
- pi-Stacking: B:W.670
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.44: 13 residues within 4Å:- Chain A: W.39, N.40, H.42, A.43, D.44, R.562, W.579, S.710, Q.713
- Ligands: CLA.5, CLA.29, CLA.40, CLA.53
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:W.39, A:H.42
- Hydrogen bonds: A:N.40, A:D.44, A:S.710, A:Q.713
- Salt bridges: A:R.562, A:R.562
LHG.45: 10 residues within 4Å:- Chain A: G.320, P.321, F.322, T.323, H.327
- Ligands: CLA.23, CLA.30, CLA.31, CLA.43, BCR.48
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:F.322, A:T.323
LHG.106: 8 residues within 4Å:- Chain B: P.309, P.310
- Chain L: L.27, V.30, N.33
- Ligands: CLA.79, CLA.97, BCR.102
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain L- Salt bridges: B:R.313
- Hydrogen bonds: L:N.33
LHG.144: 10 residues within 4Å:- Chain L: K.147, L.151, L.154
- Chain N: F.94, I.95
- Ligands: CLA.134, CLA.138, CHL.145, BCR.162, CLA.178
4 PLIP interactions:2 interactions with chain N, 2 interactions with chain L- Hydrophobic interactions: N:F.94, N:I.95
- Salt bridges: L:K.147, L:K.147
LHG.195: 9 residues within 4Å:- Chain M: F.113, Y.132
- Chain O: K.169, L.176
- Ligands: BCR.148, CLA.185, CLA.186, CLA.189, CHL.196
3 PLIP interactions:3 interactions with chain O- Hydrophobic interactions: O:L.176
- Salt bridges: O:K.169, O:K.169
- 25 x BCR: BETA-CAROTENE(Non-covalent)(Non-functional Binders)
BCR.46: 12 residues within 4Å:- Chain A: T.151, G.154, A.155, F.158, L.200, S.201
- Ligands: CLA.4, CLA.13, CLA.14, CLA.15, BCR.47, BCR.54
Ligand excluded by PLIPBCR.47: 6 residues within 4Å:- Chain A: G.198
- Ligands: CLA.4, CLA.5, CLA.18, CLA.28, BCR.46
Ligand excluded by PLIPBCR.48: 7 residues within 4Å:- Chain A: A.340, F.401, L.416
- Ligands: CLA.23, CLA.43, LHG.45, BCR.49
Ligand excluded by PLIPBCR.49: 8 residues within 4Å:- Chain A: A.347, S.351, A.395
- Ligands: CLA.25, CLA.26, CLA.34, CLA.38, BCR.48
Ligand excluded by PLIPBCR.50: 13 residues within 4Å:- Chain A: G.665, A.666, F.668, V.669, I.727, W.731
- Chain B: V.437
- Ligands: CLA.27, CLA.40, CLA.55, CLA.88, CLA.89, BCR.116
Ligand excluded by PLIPBCR.51: 11 residues within 4Å:- Chain A: W.108, I.110
- Chain I: P.12, V.13, T.16, I.27, E.28, R.31
- Ligands: CLA.53, CLA.115, BCR.116
Ligand excluded by PLIPBCR.54: 16 residues within 4Å:- Chain A: F.253, I.292, L.295, I.296, H.299, I.307
- Chain J: A.61, C.62, A.64, V.65
- Ligands: CLA.14, CLA.19, CLA.21, BCR.46, BCR.122, CLA.123
Ligand excluded by PLIPBCR.99: 6 residues within 4Å:- Chain B: F.281, L.284, H.288
- Ligands: CLA.71, CLA.76, CLA.77
Ligand excluded by PLIPBCR.100: 5 residues within 4Å:- Chain B: I.56, F.57, G.180
- Ligands: CLA.69, CLA.84
Ligand excluded by PLIPBCR.101: 5 residues within 4Å:- Chain B: W.122, G.137, W.208
- Ligands: CLA.70, CLA.71
Ligand excluded by PLIPBCR.102: 8 residues within 4Å:- Chain B: M.410, V.534
- Ligands: CLA.78, CLA.79, CLA.86, BCR.103, LHG.106, CLA.136
Ligand excluded by PLIPBCR.103: 10 residues within 4Å:- Chain B: F.331, G.334, A.338, F.386, G.389
- Ligands: CLA.75, CLA.81, CLA.82, CLA.90, BCR.102
Ligand excluded by PLIPBCR.104: 11 residues within 4Å:- Chain A: I.435
- Chain B: W.647, M.648, F.651, I.674
- Ligands: CLA.41, CLA.59, CLA.64, CLA.65, CLA.96, PQN.98
Ligand excluded by PLIPBCR.109: 12 residues within 4Å:- Chain A: I.688
- Chain B: F.430
- Chain F: L.89, F.90, I.93
- Ligands: CLA.39, PQN.42, CLA.55, CLA.88, CLA.89, CLA.114, DGD.117
Ligand excluded by PLIPBCR.111: 7 residues within 4Å:- Chain A: L.698
- Chain F: F.83, R.102
- Ligands: CLA.39, CLA.87, CLA.93, CLA.110
Ligand excluded by PLIPBCR.112: 10 residues within 4Å:- Chain H: G.11, L.12, P.15, M.19
- Ligands: CLA.32, CLA.33, CLA.63, CLA.65, CLA.66, BCR.124
Ligand excluded by PLIPBCR.113: 9 residues within 4Å:- Chain B: I.24
- Chain H: M.19, L.22, F.23
- Chain K: L.74, C.77, L.78
- Ligands: CLA.41, CLA.126
Ligand excluded by PLIPBCR.116: 10 residues within 4Å:- Chain A: I.72
- Chain I: A.23, L.26
- Ligands: CLA.5, CLA.6, CLA.7, CLA.8, BCR.50, BCR.51, CLA.89
Ligand excluded by PLIPBCR.122: 9 residues within 4Å:- Chain J: T.14, L.18, G.63, H.67, I.68
- Ligands: CLA.19, BCR.54, CLA.119, CLA.121
Ligand excluded by PLIPBCR.124: 13 residues within 4Å:- Chain B: T.684, P.685, L.686
- Chain K: F.47, G.66, L.70, I.73
- Ligands: CLA.31, CLA.32, CLA.41, CLA.66, BCR.112, CLA.126
Ligand excluded by PLIPBCR.128: 4 residues within 4Å:- Chain K: Y.15, W.132
- Ligands: CLA.31, CLA.125
Ligand excluded by PLIPBCR.131: 2 residues within 4Å:- Ligands: CLA.137, CLA.143
Ligand excluded by PLIPBCR.148: 8 residues within 4Å:- Chain M: L.110, I.111, F.133
- Ligands: CLA.154, CLA.160, CLA.189, LHG.195, CHL.196
Ligand excluded by PLIPBCR.162: 10 residues within 4Å:- Chain N: L.96, Y.99, P.118, I.119
- Ligands: CLA.138, LHG.144, CHL.145, CLA.170, CHL.175, CHL.177
Ligand excluded by PLIPBCR.182: 8 residues within 4Å:- Chain O: L.105, W.108, V.109
- Ligands: CLA.171, CLA.173, CLA.188, CHL.192, CHL.194
Ligand excluded by PLIP- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.56: 8 residues within 4Å:- Chain A: C.565, C.574, I.711, R.715
- Chain B: C.558, P.561, C.567, W.666
2 PLIP interactions:2 interactions with chain A,- Metal complexes: A:C.565, A:C.574
SF4.107: 9 residues within 4Å:- Chain C: C.21, P.22, V.25, C.48, G.50, C.51, R.53, C.54, V.67
3 PLIP interactions:3 interactions with chain C,- Metal complexes: C:C.48, C:C.51, C:C.54
SF4.108: 12 residues within 4Å:- Chain C: C.11, I.12, G.13, C.14, T.15, Q.16, C.17, M.28, C.58, P.59, S.64, V.65
1 PLIP interactions:1 interactions with chain C,- Metal complexes: C:C.11
- 2 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.105: 21 residues within 4Å:- Chain B: S.8, L.11, W.21, F.22, A.25, T.26, D.29, S.32, S.555, W.572, F.575, Q.703, L.706, L.709, A.710, S.713
- Chain C: G.70
- Ligands: CLA.60, CLA.62, CLA.85, CLA.96
15 PLIP interactions:14 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:W.21, B:W.21, B:F.22, B:A.25, B:F.575, B:L.706, B:L.706, B:L.709
- Hydrogen bonds: B:S.8, B:T.26, B:T.26, B:S.555, B:S.555, B:S.555, C:G.70
DGD.117: 22 residues within 4Å:- Chain B: H.431, L.435, I.454, F.516, H.520
- Chain F: N.55, K.58, F.59, E.82, F.83
- Chain I: I.29, F.33, P.34, A.36, L.37, S.38, F.39, P.40, F.41
- Ligands: CLA.89, CLA.93, BCR.109
11 PLIP interactions:4 interactions with chain B, 6 interactions with chain I, 1 interactions with chain F- Hydrophobic interactions: B:H.431, B:L.435, B:I.454, B:F.516, I:I.29, I:F.33, I:F.33, I:F.41, F:F.83
- Hydrogen bonds: I:F.33, I:A.36
- 2 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.118: 7 residues within 4Å:- Chain F: R.117, I.121, V.123
- Chain I: R.2, K.5, T.6, S.9
6 PLIP interactions:2 interactions with chain I, 4 interactions with chain F- Hydrogen bonds: I:T.6, I:S.9, F:R.117, F:R.117, F:I.121, F:V.123
LMG.179: 1 residues within 4Å:- Chain N: P.26
No protein-ligand interaction detected (PLIP)- 6 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.129: 8 residues within 4Å:- Chain L: L.56, F.126, D.127, A.155
- Ligands: CLA.132, CLA.133, CLA.134, CLA.141
1 PLIP interactions:1 interactions with chain L- Hydrophobic interactions: L:L.56
LUT.130: 15 residues within 4Å:- Chain L: D.23, P.24, L.25, H.44, W.47, A.48, C.51, G.54, V.55, W.66, M.153
- Ligands: CLA.135, CLA.136, CLA.137, CHL.140
7 PLIP interactions:7 interactions with chain L- Hydrophobic interactions: L:L.25, L:W.47, L:A.48, L:C.51, L:V.55, L:M.153
- Hydrogen bonds: L:L.25
LUT.146: 11 residues within 4Å:- Chain M: M.56, V.59, F.154, N.155, P.156, L.180, A.184, L.203
- Ligands: CLA.149, CLA.150, CLA.151
6 PLIP interactions:6 interactions with chain M- Hydrophobic interactions: M:M.56, M:V.59, M:V.59, M:P.156, M:L.180, M:A.184
LUT.147: 16 residues within 4Å:- Chain M: F.24, D.25, P.26, T.54, G.58, M.62, W.82, A.85, A.87, M.182, F.185
- Ligands: CLA.152, CLA.153, CLA.154, CLA.157, CLA.160
9 PLIP interactions:9 interactions with chain M- Hydrophobic interactions: M:F.24, M:F.24, M:M.62, M:W.82, M:A.87, M:M.182, M:F.185, M:F.185
- Hydrogen bonds: M:D.25
LUT.163: 18 residues within 4Å:- Chain N: M.51, V.54, L.58, F.137, N.138, P.139, L.140, F.142, N.155, A.162, F.166, Q.169, P.177, L.181
- Ligands: CLA.165, CLA.166, CLA.167, CHL.175
11 PLIP interactions:11 interactions with chain N- Hydrophobic interactions: N:M.51, N:V.54, N:V.54, N:L.58, N:L.140, N:A.162, N:F.166, N:L.181, N:L.181
- Hydrogen bonds: N:Q.169, N:P.177
LUT.180: 18 residues within 4Å:- Chain O: M.60, V.63, F.147, D.148, W.149, G.150, N.170, L.173, A.174, A.177, F.181, P.192, L.196
- Ligands: CLA.183, CLA.184, CLA.185, CLA.190, CHL.192
10 PLIP interactions:10 interactions with chain O- Hydrophobic interactions: O:M.60, O:L.173, O:A.174, O:A.177, O:F.181, O:F.181, O:L.196
- Hydrogen bonds: O:W.149, O:G.150, O:P.192
- 11 x CHL: CHLOROPHYLL B(Non-covalent)
CHL.140: 2 residues within 4Å:- Chain L: A.73
- Ligands: LUT.130
1 PLIP interactions:1 interactions with chain L,- Hydrophobic interactions: L:A.73
CHL.142: 13 residues within 4Å:- Chain L: R.36, E.39, S.40, Y.43, H.44, W.47, I.103, A.104, E.107, Q.108, T.111
- Ligands: CLA.136, CLA.143
9 PLIP interactions:9 interactions with chain L,- Hydrophobic interactions: L:Y.43, L:I.103, L:A.104, L:Q.108, L:T.111
- Hydrogen bonds: L:H.44
- Salt bridges: L:R.36
- pi-Stacking: L:Y.43, L:Y.43
CHL.145: 13 residues within 4Å:- Chain L: E.1, W.2, F.3, P.4, F.20
- Chain N: Y.99, I.102, R.103, P.118
- Ligands: CLA.135, LHG.144, BCR.162, CLA.178
6 PLIP interactions:2 interactions with chain N, 4 interactions with chain L,- Hydrophobic interactions: N:Y.99, N:P.118, L:W.2, L:W.2, L:F.20
- pi-Stacking: L:W.2
CHL.158: 13 residues within 4Å:- Chain M: F.50, R.53, T.54, A.114, R.117, R.118, D.121, M.128, F.133, L.140, P.146, P.149
- Ligands: CLA.149
6 PLIP interactions:6 interactions with chain M,- Hydrophobic interactions: M:R.118, M:D.121, M:F.133, M:L.140, M:P.149
- Hydrogen bonds: M:R.117
CHL.174: 9 residues within 4Å:- Chain N: Y.75, G.78, K.79, S.86, L.89, F.90, E.93
- Ligands: XAT.164, CHL.177
6 PLIP interactions:6 interactions with chain N,- Hydrophobic interactions: N:Y.75, N:L.89, N:F.90
- Hydrogen bonds: N:G.78, N:K.79
- Salt bridges: N:K.79
CHL.175: 14 residues within 4Å:- Chain N: R.48, W.49, R.103, R.104, D.107, V.114, N.115, D.117, H.128, V.136, F.137
- Ligands: BCR.162, LUT.163, CLA.165
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:D.107, N:F.137
- Hydrogen bonds: N:R.48, N:R.103
- pi-Stacking: N:F.137
CHL.177: 9 residues within 4Å:- Chain N: A.77, Y.82, F.83, E.93, F.97
- Ligands: BCR.162, XAT.164, CLA.170, CHL.174
4 PLIP interactions:4 interactions with chain N,- Hydrophobic interactions: N:A.77, N:F.83, N:E.93, N:F.97
CHL.191: 9 residues within 4Å:- Chain O: Y.84, G.87, E.88, P.95, L.98, Q.102, W.182
- Ligands: XAT.181, CHL.194
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:Y.84, O:L.98
- Hydrogen bonds: O:E.88
CHL.192: 12 residues within 4Å:- Chain O: R.57, W.58, V.109, R.112, R.113, D.116, V.123, I.125, F.147
- Ligands: LUT.180, BCR.182, CLA.183
5 PLIP interactions:5 interactions with chain O,- Hydrophobic interactions: O:V.109, O:V.109, O:R.113, O:D.116
- Hydrogen bonds: O:R.57
CHL.194: 11 residues within 4Å:- Chain O: W.58, G.87, Y.91, F.92, L.98, T.101, Q.102
- Ligands: XAT.181, BCR.182, CLA.188, CHL.191
6 PLIP interactions:6 interactions with chain O,- Hydrophobic interactions: O:W.58, O:Y.91, O:F.92, O:L.98, O:Q.102
- Hydrogen bonds: O:T.101
CHL.196: 15 residues within 4Å:- Chain M: F.113, H.116, R.117, Q.120, Q.131, F.133
- Chain O: P.11, W.13, F.14, P.15, F.31
- Ligands: BCR.148, CLA.161, CLA.186, LHG.195
10 PLIP interactions:4 interactions with chain M, 6 interactions with chain O,- Hydrophobic interactions: M:F.113, M:F.133, O:P.11, O:W.13, O:W.13, O:F.14, O:P.15
- Hydrogen bonds: M:R.117
- Salt bridges: M:H.116
- Metal complexes: O:W.13
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.164: 18 residues within 4Å:- Chain N: F.24, D.25, P.26, L.27, L.29, N.46, W.49, A.50, G.53, M.57, W.74, M.160, F.163
- Ligands: CLA.168, CLA.169, CLA.170, CHL.174, CHL.177
8 PLIP interactions:8 interactions with chain N- Hydrophobic interactions: N:F.24, N:L.27, N:N.46, N:W.49, N:A.50, N:M.160
- Hydrogen bonds: N:L.27, N:W.74
XAT.181: 14 residues within 4Å:- Chain O: F.33, D.34, P.35, L.36, A.62, I.66, W.83, M.175, F.178
- Ligands: CLA.186, CLA.187, CLA.188, CHL.191, CHL.194
6 PLIP interactions:6 interactions with chain O- Hydrophobic interactions: O:L.36, O:I.66, O:W.83, O:F.178
- Hydrogen bonds: O:D.34, O:L.36
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shen, L. et al., Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare. Nature (2022)
- Release Date
- 2022-01-12
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit D: D
Photosystem I reaction center subunit E: E
Photosystem I reaction center subunit F: F
Photosystem I reaction center subunit H: G
Photosystem I reaction center subunit VIII: H
Photosystem I reaction center subunit IX: I
Photosystem I reaction center subunit K: J
Photosystem I reaction center subunit L: K
Chlorophyll a-b binding protein Lhca1: L
Chlorophyll a-b binding protein Lhca3: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein Lhca6: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
HH
II
JJ
KK
LL
1M
3N
4O
6 - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 137 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 25 x BCR: BETA-CAROTENE(Non-covalent)(Non-functional Binders)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 2 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 6 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 11 x CHL: CHLOROPHYLL B(Non-covalent)
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shen, L. et al., Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare. Nature (2022)
- Release Date
- 2022-01-12
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit D: D
Photosystem I reaction center subunit E: E
Photosystem I reaction center subunit F: F
Photosystem I reaction center subunit H: G
Photosystem I reaction center subunit VIII: H
Photosystem I reaction center subunit IX: I
Photosystem I reaction center subunit K: J
Photosystem I reaction center subunit L: K
Chlorophyll a-b binding protein Lhca1: L
Chlorophyll a-b binding protein Lhca3: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein Lhca6: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
HH
II
JJ
KK
LL
1M
3N
4O
6 - Membrane
-
We predict this structure to be a membrane protein.