- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 2 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
CL0.1: 21 residues within 4Å:- Chain A: Y.453, Y.598, N.599, V.603, F.606, I.641, W.644, L.649, A.653, F.671, H.675, W.678, Y.730, T.737, T.738, F.741
- Chain B: L.620, W.625
- Ligands: CLA.3, CLA.54, CLA.60
15 PLIP interactions:14 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: A:V.603, A:F.606, A:I.641, A:W.644, A:L.649, A:A.653, A:F.671, A:W.678, A:W.678, A:T.737, A:F.741, B:L.620
- Hydrogen bonds: A:Y.730
- pi-Stacking: A:F.671
- Metal complexes: A:H.675
CL0.111: 7 residues within 4Å:- Chain F: N.32, Q.35, F.38, F.39
- Chain H: L.103
- Ligands: CLA.115, BCR.119
4 PLIP interactions:1 interactions with chain H, 3 interactions with chain F,- Hydrophobic interactions: H:L.103, F:Q.35, F:F.38, F:F.39
- 140 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
CLA.2: 24 residues within 4Å:- Chain A: F.676, A.679, F.680, M.683, F.686, Y.691, W.692, L.695
- Chain B: S.423, S.426, L.427, G.430, F.431, L.434, L.532, I.533, L.578, F.581, W.582
- Ligands: CLA.4, CLA.31, CLA.42, BCR.52, CLA.54
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:F.676, A:A.679, A:F.680, A:F.686, A:Y.691, A:W.692, B:F.431, B:I.533, B:L.578, B:F.581
- Hydrogen bonds: A:Y.691
- pi-Stacking: B:W.582
CLA.3: 21 residues within 4Å:- Chain A: F.450, I.454, F.539, F.595, W.596, N.599, I.641, Y.730
- Chain B: W.648, L.651, H.654, L.655, W.657, A.658
- Ligands: CL0.1, CLA.60, CLA.61, CLA.67, CLA.68, BCR.102, BCR.112
9 PLIP interactions:4 interactions with chain A, 4 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: A:F.450, A:I.454, A:F.539, A:W.596, B:W.648, B:L.651, B:A.658
- Salt bridges: B:H.654
- Metal complexes: H2O.3
CLA.4: 20 residues within 4Å:- Chain A: P.29, I.46, L.49, H.50
- Chain K: A.21, P.22, S.25, T.26, F.29, G.30
- Ligands: CLA.2, CLA.5, CLA.9, CLA.12, CLA.42, PQN.44, CLA.54, CLA.55, LUT.137, BCR.139
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain K,- Hydrophobic interactions: A:P.29, A:I.46, A:L.49, K:F.29, K:F.29
- Metal complexes: A:H.50
CLA.5: 13 residues within 4Å:- Chain A: W.26, H.31, F.32, H.50, A.53, H.54, F.56, H.59, I.80
- Ligands: CLA.4, CLA.7, CLA.12, LHG.46
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:W.26, A:A.53, A:I.80
- Salt bridges: A:H.31
- Metal complexes: A:H.54
CLA.6: 19 residues within 4Å:- Chain A: H.54, F.56, V.70, A.73, H.74, I.81, F.82, L.85, W.346, H.347, L.350, N.353, L.354
- Ligands: CLA.7, CLA.14, CLA.26, CLA.31, BCR.48, BCR.49
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:F.56, A:V.70, A:A.73, A:I.81, A:I.81, A:F.82, A:L.85, A:W.346, A:L.350, A:L.350
- Hydrogen bonds: A:N.353
- Metal complexes: A:H.74
CLA.7: 11 residues within 4Å:- Chain A: H.54, Q.77, I.81, W.84
- Ligands: CLA.5, CLA.6, CLA.29, CLA.30, CLA.31, LHG.46, BCR.49
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:I.81, A:W.84
- Salt bridges: A:H.54
CLA.8: 9 residues within 4Å:- Chain A: G.87, F.90, H.91, F.95, V.114, W.116
- Ligands: CLA.10, LMU.58, BCR.139
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:F.90
- Water bridges: A:H.91
- Metal complexes: A:H.91
CLA.9: 17 residues within 4Å:- Chain A: W.84, M.88, A.112, Q.113, Q.136, I.137, T.138, S.139, Y.667, F.670
- Ligands: CLA.4, CLA.10, CLA.12, CLA.29, CLA.42, BCR.52, BCR.139
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:Y.667, A:Y.667, A:F.670
- Hydrogen bonds: A:T.138, A:S.139, A:S.139
CLA.10: 14 residues within 4Å:- Chain A: Q.113, V.114, V.115, W.116, I.118, Q.121, L.124
- Chain B: F.446
- Chain K: I.37
- Ligands: CLA.8, CLA.9, CLA.29, CLA.89, BCR.139
8 PLIP interactions:6 interactions with chain A, 1 interactions with chain K, 1 interactions with chain B,- Hydrophobic interactions: A:V.115, A:I.118, A:L.124, K:I.37, B:F.446
- Hydrogen bonds: A:Q.113, A:W.116, A:Q.121
CLA.11: 16 residues within 4Å:- Chain A: I.12, V.14, L.169, F.172, A.173, F.176, H.177, A.181, W.187
- Chain O: G.83, G.84, F.85, I.86
- Ligands: CLA.13, CLA.14, CLA.187
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain O,- Hydrophobic interactions: A:I.12, A:F.172, A:A.173, A:F.176, A:W.187
- Metal complexes: A:H.177
- Hydrogen bonds: O:F.85
CLA.12: 22 residues within 4Å:- Chain A: V.19, K.20, T.21, S.22, E.25, W.26, H.31, K.69, S.72, L.171, G.174, W.175, Y.178, H.179
- Chain K: Y.17
- Ligands: CLA.4, CLA.5, CLA.9, LHG.46, CLA.56, LMG.57, LUT.137
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:T.21, A:E.25, A:E.25, A:L.171, A:W.175, A:Y.178
- Salt bridges: A:H.31, A:K.69
- pi-Stacking: A:Y.178
- Metal complexes: A:H.179
CLA.13: 13 residues within 4Å:- Chain A: V.10, K.11, I.12, W.187, D.190, S.193, H.197, T.311
- Chain O: L.74, L.76
- Ligands: CLA.11, CLA.14, CLA.21
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.12
- Hydrogen bonds: A:V.10, A:S.193
- Salt bridges: A:K.11
- Metal complexes: A:H.197
CLA.14: 19 residues within 4Å:- Chain A: F.71, H.74, F.75, L.78, F.82, M.170, W.187, M.194, H.197, H.198, G.201, L.202
- Ligands: CLA.6, CLA.11, CLA.13, CLA.26, CLA.30, BCR.49, CLA.187
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:F.82, A:W.187, A:W.187, A:M.194, A:H.197
- Metal complexes: A:H.198
CLA.15: 14 residues within 4Å:- Chain A: S.148, G.149, Q.155, C.158, T.159, S.209, W.210, H.213, H.216, V.217, P.237, I.241
- Ligands: CLA.17, BCR.48
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.210, A:H.213, A:H.216, A:I.241
- Water bridges: A:H.238
- Metal complexes: A:H.213
CLA.16: 12 residues within 4Å:- Chain A: L.208, G.212, I.215, H.216, I.241, R.244, G.257, Y.269
- Chain O: I.240, K.267
- Ligands: BCR.48, BCR.142
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain O,- Hydrophobic interactions: A:L.208, A:I.215, O:I.240, O:K.267
- Hydrogen bonds: A:R.244
- Salt bridges: A:H.216
- Metal complexes: A:H.216
CLA.17: 6 residues within 4Å:- Chain A: Q.155, C.158, H.238
- Chain O: P.137
- Ligands: CLA.15, CLA.190
6 PLIP interactions:1 interactions with chain O, 4 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: O:P.137, A:Q.155, A:H.238
- Salt bridges: A:H.238
- pi-Stacking: A:H.238
- Metal complexes: H2O.3
CLA.18: 15 residues within 4Å:- Chain A: F.261, W.266, L.273, F.275, H.293, L.296, A.297, I.300, L.301, I.304, G.498
- Chain L: L.117, N.121
- Ligands: CLA.19, CLA.143
12 PLIP interactions:11 interactions with chain A, 1 interactions with chain L,- Hydrophobic interactions: A:F.261, A:W.266, A:W.266, A:W.266, A:W.266, A:W.266, A:L.273, A:L.296, A:L.301, A:I.304, L:L.117
- Metal complexes: A:H.293
CLA.19: 16 residues within 4Å:- Chain A: F.275, G.277, D.290, I.291, H.293, H.294, A.297, I.298, H.367, M.371, T.503
- Ligands: CLA.18, CLA.20, CLA.28, CLA.37, CLA.143
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:F.275, A:F.275, A:I.291, A:H.294, A:A.297, A:I.298
- Metal complexes: A:H.294
CLA.20: 20 residues within 4Å:- Chain A: L.203, G.206, S.207, W.210, Q.214, I.291, H.294, H.295, I.298, V.363, V.364, H.367, M.368, P.373, Y.374
- Ligands: CLA.19, CLA.22, CLA.28, CLA.30, CLA.36
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:W.210, A:I.291, A:I.298, A:V.363, A:V.364, A:P.373
- Water bridges: A:S.148, A:Q.214
- pi-Stacking: A:W.210, A:H.294
- Metal complexes: A:H.295
CLA.21: 13 residues within 4Å:- Chain A: N.196, H.197, G.201, L.205, L.303, H.307, Y.309, T.311, W.313, I.315
- Chain L: L.102
- Ligands: CLA.13, BCR.142
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:N.196, A:L.205, A:L.303
- Hydrogen bonds: A:N.196
- Water bridges: A:W.313
- Metal complexes: A:H.307
CLA.22: 19 residues within 4Å:- Chain A: F.302, A.305, M.308, Y.309, L.319, I.322, L.352, M.356, L.424, L.553
- Ligands: CLA.20, CLA.23, CLA.24, CLA.25, CLA.26, CLA.28, CLA.32, CLA.36, BCR.51
7 PLIP interactions:6 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: A:F.302, A:A.305, A:L.352, A:L.424, A:L.553
- Hydrogen bonds: A:Y.309
- Metal complexes: H2O.4
CLA.23: 8 residues within 4Å:- Chain A: H.317, A.325, H.326
- Chain L: T.76
- Ligands: CLA.22, CLA.24, CLA.25, CLA.45
2 PLIP interactions:2 interactions with chain A,- Hydrogen bonds: A:H.317
- Metal complexes: A:H.326
CLA.24: 13 residues within 4Å:- Chain A: I.304, M.308, I.315, G.316, H.317
- Chain L: P.69, K.74, A.75, T.76, G.78
- Ligands: CLA.22, CLA.23, BCR.142
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain L,- Hydrophobic interactions: A:M.308, A:I.315
- Hydrogen bonds: A:G.316, L:A.75
- Salt bridges: A:H.317, L:K.74
- Metal complexes: A:H.317
CLA.25: 17 residues within 4Å:- Chain A: L.323, H.326, H.335, L.338, N.421, L.423
- Ligands: CLA.22, CLA.23, CLA.26, CLA.27, CLA.32, CLA.36, CLA.40, CLA.45, LHG.47, BCR.50, BCR.51
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.338, A:L.423
- Salt bridges: A:H.326
- Metal complexes: A:H.335
CLA.26: 19 residues within 4Å:- Chain A: S.67, F.188, V.191, L.195, H.198, L.199, L.319, L.342, T.343, W.346, L.352, N.353, M.356
- Ligands: CLA.6, CLA.14, CLA.22, CLA.25, CLA.28, CLA.30
11 PLIP interactions:10 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.191, A:L.195, A:L.195, A:L.195, A:L.319, A:L.342, A:W.346, A:L.352, A:M.356
- Hydrogen bonds: A:H.198
- Metal complexes: H2O.4
CLA.27: 11 residues within 4Å:- Chain A: I.362, H.366, I.399, I.541, T.544
- Ligands: CLA.25, CLA.28, CLA.38, CLA.39, CLA.40, BCR.51
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: A:I.362, A:I.399, A:T.544
- Salt bridges: A:H.366
- Metal complexes: H2O.4
CLA.28: 14 residues within 4Å:- Chain A: T.360, H.366, H.367, S.370, M.371, S.504, W.507
- Ligands: CLA.19, CLA.20, CLA.22, CLA.26, CLA.27, CLA.36, CLA.38
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:W.507, A:W.507
- pi-Cation interactions: A:H.367
- Metal complexes: A:H.367
CLA.29: 18 residues within 4Å:- Chain A: W.84, S.139, F.141, S.386, T.389, H.390, W.393, F.670, I.735, W.739
- Ligands: CLA.7, CLA.9, CLA.10, CLA.30, LHG.46, BCR.52, CLA.54, BCR.139
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:T.389, A:H.390, A:W.393, A:F.670, A:I.735, A:W.739
- pi-Stacking: A:W.739
- Metal complexes: A:H.390
CLA.30: 16 residues within 4Å:- Chain A: S.139, G.140, F.141, T.361, V.364, M.368, Y.374, L.387, H.390, H.391
- Ligands: CLA.7, CLA.14, CLA.20, CLA.26, CLA.29, BCR.49
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:V.364, A:L.387
- pi-Stacking: A:H.390
- Metal complexes: A:H.391
CLA.31: 19 residues within 4Å:- Chain A: H.50, A.51, H.54, D.55, F.397, G.401, H.405, I.408, R.412, F.569, R.570, W.587
- Ligands: CLA.2, CLA.6, CLA.7, CLA.42, LHG.46, BCR.52, CLA.54
6 PLIP interactions:6 interactions with chain A,- Hydrogen bonds: A:H.54, A:R.570
- Water bridges: A:R.570
- Salt bridges: A:R.412, A:R.570
- Metal complexes: A:H.405
CLA.32: 12 residues within 4Å:- Chain A: F.330, R.426, H.430, I.434, H.437
- Chain H: V.56, P.71
- Ligands: CLA.22, CLA.25, CLA.33, CLA.40, LHG.47
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.434, A:H.437
- Hydrogen bonds: A:R.426
- Salt bridges: A:H.430
- Metal complexes: A:H.430
CLA.33: 18 residues within 4Å:- Chain A: A.433, H.437, W.440
- Chain B: W.680, A.681, T.685, P.686
- Chain F: Y.23
- Chain H: S.67, L.68, T.70, V.72, T.73, V.78
- Ligands: CLA.32, CLA.39, CLA.43, CLA.116
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: A:W.440, H:T.73, H:V.78
- Metal complexes: A:H.437
CLA.34: 14 residues within 4Å:- Chain A: W.440, I.443, F.444, F.447, H.448
- Ligands: CLA.35, CLA.43, CLA.95, PQN.97, BCR.102, BCR.112, LMU.113, BCR.114, BCR.118
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:F.444, A:F.447
- pi-Stacking: A:F.444
- Metal complexes: A:H.448
CLA.35: 21 residues within 4Å:- Chain A: F.447, G.451, L.452, I.454, H.455, T.458, M.459, R.464, D.467
- Chain H: P.112, F.113, T.116, G.117, P.118, R.120
- Ligands: CLA.34, CLA.67, CLA.68, BCR.114, CLA.116, CLA.117
9 PLIP interactions:2 interactions with chain H, 7 interactions with chain A,- Hydrophobic interactions: H:P.112, H:F.113, A:L.452, A:I.454, A:H.455
- Hydrogen bonds: A:R.464
- Water bridges: A:R.464
- Salt bridges: A:R.464
- Metal complexes: A:H.455
CLA.36: 14 residues within 4Å:- Chain A: I.487, H.488, A.491, T.495, T.503
- Ligands: CLA.20, CLA.22, CLA.25, CLA.28, CLA.37, CLA.40, BCR.50, BCR.51, CLA.143
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:I.487
- Hydrogen bonds: A:T.495
- Metal complexes: A:H.488
CLA.37: 8 residues within 4Å:- Chain A: T.495, A.496, P.497, G.498
- Ligands: CLA.19, CLA.36, BCR.51, CLA.143
2 PLIP interactions:2 interactions with chain A,- Hydrogen bonds: A:G.498
- Metal complexes: A:T.495
CLA.38: 15 residues within 4Å:- Chain A: Y.369, F.480, A.481, V.484, Q.485, W.507, H.534, H.537, V.604, H.607, F.608
- Ligands: CLA.27, CLA.28, CLA.39, CLA.40
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:F.480, A:H.537, A:V.604, A:F.608
- Hydrogen bonds: A:Q.485
- Metal complexes: A:H.534
CLA.39: 15 residues within 4Å:- Chain A: V.441, L.445, P.478, I.479, F.480, A.481, F.531, H.534, H.535
- Ligands: CLA.27, CLA.33, CLA.38, CLA.40, LMU.59, BCR.114
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:V.441, A:L.445, A:F.480
- Hydrogen bonds: A:F.480, A:A.481
- Salt bridges: A:H.534
- pi-Stacking: A:F.531
- Metal complexes: A:H.535
CLA.40: 12 residues within 4Å:- Chain A: L.438, A.538, I.541, H.542
- Ligands: CLA.25, CLA.27, CLA.32, CLA.36, CLA.38, CLA.39, BCR.50, BCR.51
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.438, A:I.541
- Salt bridges: A:H.542
- Metal complexes: A:H.542
CLA.41: 16 residues within 4Å:- Chain A: I.699, A.702, H.703, L.706
- Chain B: S.420, S.423, W.424, L.427
- Chain I: G.121, Y.124
- Ligands: PQN.44, CLA.55, CLA.88, BCR.120, CLA.121, CLA.123
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:I.699, A:L.706, I:Y.124
- Metal complexes: A:H.703
CLA.42: 16 residues within 4Å:- Chain A: W.47, F.680, Q.721, V.725, T.728, H.729, L.732
- Chain K: F.29
- Ligands: CLA.2, CLA.4, CLA.9, CLA.31, PQN.44, LHG.46, BCR.52, BCR.120
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain K,- Hydrophobic interactions: A:W.47, A:V.725, A:T.728, A:L.732, K:F.29
- Hydrogen bonds: A:Q.721, A:T.728
- Salt bridges: A:H.729
- Metal complexes: A:H.729
CLA.43: 17 residues within 4Å:- Chain A: S.436, N.439, W.440, I.443
- Chain B: L.678, A.681, H.682, T.685, I.691
- Chain H: L.109
- Ligands: CLA.33, CLA.34, CLA.95, PQN.97, BCR.102, CLA.116, BCR.118
8 PLIP interactions:1 interactions with chain A, 5 interactions with chain B, 1 interactions with chain H, 1 Ligand-Water interactions,- Hydrophobic interactions: A:I.443, B:L.678, B:T.685, B:I.691, H:L.109
- Water bridges: B:H.682
- pi-Stacking: B:H.682
- Metal complexes: H2O.3
CLA.45: 6 residues within 4Å:- Chain A: H.326, K.327, P.329
- Ligands: CLA.23, CLA.25, LHG.47
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:K.327, A:P.329
CLA.54: 20 residues within 4Å:- Chain A: L.669, L.672, G.673, H.675, F.676, W.678, A.679
- Chain B: V.438, D.441, F.581, W.582, N.585, L.616
- Ligands: CL0.1, CLA.2, CLA.4, CLA.29, CLA.31, BCR.52, CLA.60
12 PLIP interactions:6 interactions with chain B, 5 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: B:V.438, B:D.441, B:W.582, B:W.582, B:N.585, A:L.672, A:L.672, A:F.676, A:A.679
- pi-Stacking: B:W.589
- Salt bridges: A:H.675
- Metal complexes: H2O.12
CLA.55: 22 residues within 4Å:- Chain A: T.43, I.46, V.700, H.703, V.708, P.710, P.714, R.715
- Chain I: Y.124, L.125, E.138, I.141, S.147, I.150
- Chain K: A.21, L.24, S.25, W.28
- Ligands: CLA.4, CLA.41, PQN.44, LMG.129
12 PLIP interactions:2 interactions with chain I, 6 interactions with chain A, 3 interactions with chain K, 1 Ligand-Water interactions,- Hydrophobic interactions: I:L.125, I:I.150, A:T.43, A:I.46, A:V.700, A:P.710, A:P.714, A:P.714, K:L.24, K:W.28, K:W.28
- Metal complexes: H2O.4
CLA.56: 6 residues within 4Å:- Chain A: F.172, W.175, K.180
- Ligands: CLA.12, LMG.57, CLA.197
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:W.175
- Salt bridges: A:K.180
- pi-Stacking: A:F.172
CLA.60: 20 residues within 4Å:- Chain A: L.645, L.649, W.650
- Chain B: Y.437, A.522, W.589, F.592, W.619, L.624, S.628, F.650, H.654, W.657, Y.717, T.720, Y.721, F.724
- Ligands: CL0.1, CLA.3, CLA.54
18 PLIP interactions:2 interactions with chain A, 16 interactions with chain B,- Hydrophobic interactions: A:L.645, A:L.649, B:Y.437, B:A.522, B:W.589, B:F.592, B:W.619, B:W.619, B:L.624, B:F.650, B:W.657, B:W.657, B:W.657, B:W.657, B:Y.717, B:F.724
- pi-Stacking: B:F.650
- Metal complexes: B:H.654
CLA.61: 19 residues within 4Å:- Chain A: N.439, I.443, G.446, F.447, F.450, I.454, F.539, L.546, I.547, F.595, W.596
- Chain B: A.658, T.659, F.661, M.662, Y.670, W.671
- Ligands: CLA.3, BCR.102
11 PLIP interactions:7 interactions with chain A, 4 interactions with chain B,- Hydrophobic interactions: A:F.447, A:F.450, A:I.454, A:I.547, A:F.595, B:A.658, B:F.661, B:Y.670, B:W.671
- pi-Stacking: A:W.596, A:W.596
CLA.62: 10 residues within 4Å:- Chain B: F.8, I.25, A.28, H.29, F.31, H.34, S.49, I.56
- Ligands: CLA.64, LHG.106
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:I.25, B:A.28, B:F.31, B:I.56
- Metal complexes: B:H.29
CLA.63: 17 residues within 4Å:- Chain B: H.29, F.31, I.46, S.49, H.50, Q.53, L.54, R.174, H.178, I.330, L.334, A.337, L.338
- Ligands: CLA.64, CLA.71, CLA.81, CLA.86
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:F.31, B:I.46, B:I.46, B:L.334
- Metal complexes: B:H.50
CLA.64: 13 residues within 4Å:- Chain B: H.29, Q.53, I.57, W.60, F.381
- Ligands: CLA.62, CLA.63, CLA.66, CLA.84, CLA.85, CLA.86, BCR.99, DGD.104
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:I.57, B:W.60, B:F.381
- Salt bridges: B:H.29
CLA.65: 16 residues within 4Å:- Chain B: L.59, G.63, F.66, H.67, Q.71, A.90, W.92
- Chain G: L.6, P.7, F.10, V.11, V.14
- Ligands: CLA.66, CLA.67, LHG.106, BCR.112
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:F.66, B:F.66, G:F.10
- Hydrogen bonds: B:Q.71
- Salt bridges: B:H.67
- Metal complexes: B:H.67
CLA.66: 18 residues within 4Å:- Chain B: N.64, V.68, A.88, H.89, N.114, I.115, A.116, Y.117, S.118, V.645, W.646, M.649
- Ligands: CLA.64, CLA.65, CLA.67, CLA.84, BCR.102, BCR.112
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:A.88, B:V.645, B:W.646
- Hydrogen bonds: B:Y.117, B:S.118, B:S.118
- Metal complexes: B:H.89
CLA.67: 22 residues within 4Å:- Chain A: A.461, L.462
- Chain B: H.89, I.91, W.92, D.93, H.95, F.96, N.114, S.644, V.645
- Chain G: P.19, A.22
- Ligands: CLA.3, CLA.35, CLA.65, CLA.66, CLA.68, CLA.96, BCR.102, BCR.112, BCR.118
8 PLIP interactions:6 interactions with chain B, 1 interactions with chain G, 1 interactions with chain A,- Hydrophobic interactions: B:I.91, B:F.96, B:V.645, G:A.22, A:L.462
- Hydrogen bonds: B:W.92, B:N.114
- Metal complexes: B:D.93
CLA.68: 20 residues within 4Å:- Chain B: P.94, H.95
- Chain F: G.60, L.63, L.64, L.76
- Chain G: G.15, L.16, V.17
- Chain H: P.118, L.119, A.128, G.135, T.138
- Ligands: CLA.3, CLA.35, CLA.67, LMU.110, BCR.112, BCR.114
6 PLIP interactions:2 interactions with chain G, 2 interactions with chain F, 1 interactions with chain B, 1 interactions with chain H,- Hydrophobic interactions: G:L.16, G:V.17, F:L.63, F:L.64, H:A.128
- Metal complexes: B:H.95
CLA.69: 13 residues within 4Å:- Chain B: F.51, A.152, L.155, H.156, W.161, P.163, W.167
- Chain J: R.94
- Ligands: CLA.70, CLA.71, CLA.72, BCR.99, LMU.132
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain J,- Hydrophobic interactions: B:F.51, B:A.152, B:L.155, B:P.163, B:W.167
- Metal complexes: B:H.156
- Salt bridges: J:R.94
CLA.70: 13 residues within 4Å:- Chain B: W.167, N.170, S.173, H.177, T.293, N.294
- Chain J: D.92, R.94, F.98
- Ligands: CLA.69, CLA.71, CLA.77, BCR.99
2 PLIP interactions:2 interactions with chain B,- Hydrogen bonds: B:S.173
- Metal complexes: B:H.177
CLA.71: 20 residues within 4Å:- Chain B: F.47, H.50, F.51, L.54, W.123, W.167, R.174, H.177, H.178, G.181, L.182, F.183, Y.358
- Ligands: CLA.63, CLA.69, CLA.70, CLA.75, CLA.85, BCR.99, LMU.132
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:F.47, B:W.123, B:W.167, B:W.167, B:W.167, B:R.174, B:L.182, B:L.182, B:F.183
- Hydrogen bonds: B:H.50
- Salt bridges: B:H.50
- Metal complexes: B:H.178
CLA.72: 20 residues within 4Å:- Chain B: F.58, I.127, G.128, L.129, F.141, L.145, S.149, S.186, A.189, W.190, G.192, H.193, H.196, V.197, R.208, W.209
- Ligands: CLA.69, CLA.85, BCR.99, BCR.100
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:F.58, B:I.127, B:F.141, B:L.145, B:A.189, B:W.190, B:H.193, B:H.196, B:V.197, B:W.209, B:W.209
- Hydrogen bonds: B:W.209
- Salt bridges: B:R.208
- pi-Stacking: B:W.190, B:W.209
- Metal complexes: B:H.193
CLA.73: 13 residues within 4Å:- Chain B: L.188, A.189, G.192, H.196, F.212, L.213, V.215, L.216, P.217, G.221, L.222
- Ligands: BCR.100, BCR.131
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:F.212, B:P.217, B:L.222
- Metal complexes: B:H.196
CLA.74: 16 residues within 4Å:- Chain B: T.256, L.257, G.259, L.268, D.272, H.276, I.280, I.283, H.351, L.355, W.493
- Ligands: CLA.75, CLA.81, CLA.83, CLA.90, CLA.130
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.257, B:H.276, B:I.280, B:I.283, B:W.493
- Hydrogen bonds: B:H.351
- Metal complexes: B:H.276
CLA.75: 20 residues within 4Å:- Chain B: W.123, T.126, F.183, S.186, S.187, W.190, I.273, H.276, H.277, I.280, L.347, V.348, M.352, Y.358
- Ligands: CLA.71, CLA.74, CLA.83, CLA.85, CLA.90, BCR.101
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:W.190, B:I.273, B:I.280, B:L.347, B:V.348
- pi-Stacking: B:W.190, B:H.276
- Metal complexes: B:H.277
CLA.76: 11 residues within 4Å:- Chain B: F.284, A.287, M.290, Y.291, L.304
- Ligands: CLA.78, CLA.79, CLA.80, CLA.81, BCR.101, LHG.105
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:F.284, B:A.287
- Metal complexes: H2O.14
CLA.77: 14 residues within 4Å:- Chain B: N.176, S.180, V.185, L.285, H.289, T.293, F.295, I.297
- Chain J: L.116, S.120
- Ligands: CLA.70, BCR.131, CLA.133, BCR.135
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain J,- Hydrophobic interactions: B:N.176, B:V.185, B:L.285, B:F.295, J:L.116
- Hydrogen bonds: B:N.176, B:T.293
- Metal complexes: B:H.289
CLA.78: 14 residues within 4Å:- Chain B: I.286, M.290, I.297, G.298, H.299
- Chain J: F.67, F.70, Q.71, N.74, V.75, Q.78
- Ligands: CLA.76, CLA.79, BCR.131
7 PLIP interactions:3 interactions with chain B, 4 interactions with chain J,- Hydrogen bonds: B:G.298, J:Q.71
- Salt bridges: B:H.299
- Metal complexes: B:H.299
- Hydrophobic interactions: J:F.67, J:F.67, J:F.70
CLA.79: 18 residues within 4Å:- Chain B: F.282, I.286, H.299, D.303, L.304, A.307, H.308
- Chain J: Q.78, I.124
- Ligands: CLA.76, CLA.78, CLA.98, BCR.103, BCR.131, LMU.136, LMU.146, CLA.149, CLA.154
6 PLIP interactions:2 interactions with chain J, 4 interactions with chain B,- Hydrophobic interactions: J:I.124, B:F.282, B:I.286, B:L.304
- Hydrogen bonds: J:Q.78
- Metal complexes: B:H.308
CLA.80: 12 residues within 4Å:- Chain B: L.305, H.308, H.319, L.322, I.326, V.407, M.411
- Ligands: CLA.76, CLA.81, CLA.87, CLA.98, BCR.103
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.305, B:H.308, B:L.322, B:I.326, B:V.407
- Salt bridges: B:H.308
- Metal complexes: B:H.319
CLA.81: 15 residues within 4Å:- Chain B: A.171, R.174, L.175, H.178, L.179, I.301, Y.323, A.337, S.340, I.344
- Ligands: CLA.63, CLA.74, CLA.76, CLA.80, CLA.83
8 PLIP interactions:7 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.175, B:L.175, B:L.175, B:I.301, B:Y.323, B:A.337, B:I.344
- Metal complexes: H2O.14
CLA.82: 15 residues within 4Å:- Chain B: V.343, S.346, L.347, Q.350, Q.376, L.527, T.530, T.531, I.587
- Ligands: CLA.83, CLA.92, CLA.93, CLA.94, BCR.101, BCR.125
7 PLIP interactions:6 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:T.530, B:T.531, B:I.587
- Hydrogen bonds: B:S.346, B:Q.350, B:Q.376
- Metal complexes: H2O.12
CLA.83: 17 residues within 4Å:- Chain B: V.343, L.347, Q.350, H.351, S.354, L.508, F.509
- Ligands: CLA.74, CLA.75, CLA.81, CLA.82, CLA.90, CLA.92, CLA.94, BCR.101, BCR.103, LHG.105
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:V.343, B:V.343, B:L.508, B:F.509, B:F.509
- pi-Cation interactions: B:H.351
- Metal complexes: B:H.351
CLA.84: 16 residues within 4Å:- Chain B: W.60, N.64, S.118, A.370, T.373, H.374, Y.377, M.649, I.718, A.722, I.726
- Ligands: CLA.64, CLA.66, CLA.85, CLA.86, DGD.104
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:A.370, B:T.373, B:H.374, B:Y.377, B:A.722
- Metal complexes: B:H.374
CLA.85: 21 residues within 4Å:- Chain B: W.60, T.61, S.118, G.119, W.123, L.341, I.344, T.345, V.348, M.352, Y.358, L.371, H.374, H.375, I.378
- Ligands: CLA.64, CLA.71, CLA.72, CLA.75, CLA.84, BCR.99
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.123, B:L.341, B:I.344, B:V.348, B:L.371, B:I.378
- Hydrogen bonds: B:Y.358
- pi-Stacking: B:H.374
- Metal complexes: B:H.375
CLA.86: 20 residues within 4Å:- Chain B: A.26, H.29, D.30, F.381, T.384, G.385, H.389, I.392, R.396, Y.555, W.573, F.576, L.707, V.715, F.719
- Ligands: CLA.63, CLA.64, CLA.84, CLA.96, DGD.104
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:A.26, B:F.576, B:F.576, B:F.576, B:L.707, B:V.715, B:F.719
- Hydrogen bonds: B:H.29
- Salt bridges: B:R.396
- Metal complexes: B:H.389
CLA.87: 10 residues within 4Å:- Chain B: R.314, L.315, R.410, M.411, H.414, H.421
- Ligands: CLA.80, CLA.88, CLA.94, CLA.98
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.315, B:H.421
- Hydrogen bonds: B:R.410
- Salt bridges: B:R.410, B:H.414
- Metal complexes: B:H.414
CLA.88: 18 residues within 4Å:- Chain A: W.701
- Chain B: A.417, H.421
- Chain I: V.108, Y.112, W.156, P.157, W.164, V.170, D.173
- Ligands: CLA.41, CLA.87, CLA.94, CLA.98, CLA.121, LMU.122, BCR.125, CLA.203
8 PLIP interactions:7 interactions with chain I, 1 interactions with chain B,- Hydrophobic interactions: I:Y.112, I:W.156, I:P.157, I:P.157, I:W.164, I:W.164, I:W.164
- Metal complexes: B:H.421
CLA.89: 23 residues within 4Å:- Chain A: V.119
- Chain B: G.435, V.438, H.439, M.443, K.451, I.453
- Chain I: Y.112, I.113, F.154
- Chain K: I.39, N.40, D.45, A.46, L.47
- Ligands: CLA.10, BCR.52, BCR.120, CLA.121, CLA.123, BCR.139, DGD.140, CLA.203
14 PLIP interactions:6 interactions with chain K, 5 interactions with chain B, 2 interactions with chain I, 1 interactions with chain A,- Hydrophobic interactions: K:I.39, B:V.438, B:H.439, B:I.453, I:I.113, I:F.154, A:V.119
- Hydrogen bonds: K:N.40, K:D.45, K:A.46
- Water bridges: K:D.45, K:D.45
- Salt bridges: B:K.451
- Metal complexes: B:H.439
CLA.90: 12 residues within 4Å:- Chain B: H.467, L.477, L.478, W.493, W.497
- Ligands: CLA.74, CLA.75, CLA.83, CLA.91, CLA.92, BCR.101, LMU.126
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:L.477
- Metal complexes: B:H.467
CLA.91: 7 residues within 4Å:- Chain B: A.488, L.492, W.493
- Chain J: P.139
- Ligands: CLA.90, CLA.92, BCR.101
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:A.488, B:W.493
- Metal complexes: H2O.12
CLA.92: 20 residues within 4Å:- Chain B: Q.350, Y.353, Y.372, F.459, A.460, I.463, Q.464, L.510, I.512, H.520, I.523, V.590, Y.593, W.594
- Ligands: CLA.82, CLA.83, CLA.90, CLA.91, CLA.93, LMU.126
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:F.459, B:I.463, B:I.512, B:I.523, B:V.590, B:Y.593, B:Y.593
- Hydrogen bonds: B:Q.464
- Metal complexes: B:H.520
CLA.93: 17 residues within 4Å:- Chain B: F.428, P.457, I.458, F.459, A.460, F.517, H.520, H.521
- Chain I: F.103, I.104
- Ligands: CLA.82, CLA.92, CLA.94, CLA.121, CLA.124, BCR.125, DGD.140
9 PLIP interactions:8 interactions with chain B, 1 interactions with chain I,- Hydrophobic interactions: B:F.428, B:F.459, B:F.459, I:F.103
- Hydrogen bonds: B:F.459, B:A.460
- Salt bridges: B:H.520
- pi-Stacking: B:F.517
- Metal complexes: B:H.521
CLA.94: 11 residues within 4Å:- Chain B: L.422, A.524, L.527, H.528
- Ligands: CLA.82, CLA.83, CLA.87, CLA.88, CLA.93, CLA.98, BCR.101
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:L.422
- Salt bridges: B:H.528
- Metal complexes: B:H.528
CLA.95: 19 residues within 4Å:- Chain B: T.18, A.679, H.682, I.691, R.692, W.693, R.694, P.697, V.698
- Chain G: L.16, F.27, Q.31
- Chain H: Y.147, S.151
- Ligands: CLA.34, CLA.43, PQN.97, BCR.112, BCR.118
7 PLIP interactions:5 interactions with chain B, 1 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:T.18, B:W.693, B:P.697, B:P.697, G:F.27
- Hydrogen bonds: B:R.694
- Metal complexes: H2O.12
CLA.96: 16 residues within 4Å:- Chain B: F.652, L.655, V.656, T.659, M.662, F.663, H.712
- Chain G: A.20
- Chain H: V.143
- Ligands: CLA.67, CLA.86, PQN.97, BCR.102, DGD.104, BCR.112, BCR.118
8 PLIP interactions:6 interactions with chain B, 1 interactions with chain H, 1 interactions with chain G,- Hydrophobic interactions: B:F.652, B:L.655, B:V.656, B:F.663, H:V.143, G:A.20
- Salt bridges: B:H.712
- Metal complexes: B:H.712
CLA.98: 16 residues within 4Å:- Chain B: H.308, T.309, P.310, P.311, R.314
- Chain M: N.76, F.80
- Ligands: CLA.79, CLA.80, CLA.87, CLA.88, CLA.94, LHG.105, LMU.146, CLA.148, CLA.149
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain M,- Hydrophobic interactions: B:P.310, M:F.80
- Water bridges: B:R.314
CLA.115: 9 residues within 4Å:- Chain F: P.30, Y.31, Q.35
- Chain H: N.84, R.89, E.100, L.103
- Ligands: CL0.111, BCR.119
5 PLIP interactions:2 interactions with chain F, 3 interactions with chain H,- Hydrophobic interactions: F:P.30, H:E.100, H:L.103
- Hydrogen bonds: F:Q.35
- Metal complexes: H:E.100
CLA.116: 15 residues within 4Å:- Chain B: L.687
- Chain H: Y.81, L.85, P.86, A.87, E.100, V.101, H.105, L.108
- Ligands: CLA.33, CLA.35, CLA.43, BCR.114, BCR.118, BCR.119
5 PLIP interactions:5 interactions with chain H,- Hydrophobic interactions: H:A.87, H:L.108
- Hydrogen bonds: H:A.87
- Salt bridges: H:H.105
- Metal complexes: H:H.105
CLA.117: 10 residues within 4Å:- Chain H: Y.107, G.111, P.112, L.115, L.203, Y.210, F.211, F.212
- Ligands: CLA.35, BCR.119
7 PLIP interactions:6 interactions with chain H, 1 Ligand-Water interactions,- Hydrophobic interactions: H:Y.107, H:P.112, H:L.203, H:F.212
- Hydrogen bonds: H:Y.107, H:F.211
- Metal complexes: H2O.25
CLA.121: 16 residues within 4Å:- Chain B: W.424, L.427, F.428, F.431, H.432
- Chain I: F.103, G.107, F.110, A.114
- Ligands: CLA.41, CLA.88, CLA.89, CLA.93, BCR.120, BCR.125, DGD.140
10 PLIP interactions:7 interactions with chain I, 3 interactions with chain B,- Hydrophobic interactions: I:F.103, I:F.110, I:F.110, I:F.110, I:A.114, B:F.428
- pi-Stacking: I:F.110, I:F.110, B:F.428
- Metal complexes: B:H.432
CLA.123: 12 residues within 4Å:- Chain I: W.116, I.117, V.120, I.150, F.154
- Chain K: W.28, F.29, L.32
- Ligands: CLA.41, CLA.89, BCR.120, LMG.220
11 PLIP interactions:6 interactions with chain I, 4 interactions with chain K, 1 Ligand-Water interactions,- Hydrophobic interactions: I:I.117, I:V.120, I:F.154, I:F.154, I:F.154, I:F.154, K:F.29, K:F.29, K:L.32
- pi-Stacking: K:W.28
- Metal complexes: H2O.26
CLA.124: 12 residues within 4Å:- Chain B: I.458, F.459, W.462
- Chain I: S.94, G.95, D.96, Q.97, W.100
- Ligands: CLA.93, LMU.126, LMU.127, CLA.160
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain I,- Hydrophobic interactions: B:I.458, B:F.459, B:F.459
- Hydrogen bonds: I:Q.97, I:Q.97
- Metal complexes: I:S.94
CLA.130: 16 residues within 4Å:- Chain B: W.230, L.255, L.257, H.275, L.278, A.279, F.282, L.492
- Chain J: I.124, Y.128, A.131, N.135, G.136, Y.137, D.138
- Ligands: CLA.74
14 PLIP interactions:5 interactions with chain J, 9 interactions with chain B,- Hydrophobic interactions: J:I.124, J:A.131, J:D.138, B:W.230, B:W.230, B:W.230, B:L.278, B:A.279, B:F.282, B:F.282, B:F.282
- Hydrogen bonds: J:Y.137, J:D.138
- Metal complexes: B:H.275
CLA.133: 9 residues within 4Å:- Chain B: L.226
- Chain J: S.49, I.52, S.53, T.56, H.123, Y.127
- Ligands: CLA.77, BCR.135
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain J,- Hydrophobic interactions: B:L.226, J:I.52
- Metal complexes: J:H.123
CLA.134: 10 residues within 4Å:- Chain J: L.60, R.64, F.65, S.104, N.105, D.106, P.107, F.110, N.111
- Ligands: BCR.135
7 PLIP interactions:7 interactions with chain J,- Hydrophobic interactions: J:R.64, J:R.64, J:F.65, J:F.110, J:F.110
- pi-Cation interactions: J:R.64
- Metal complexes: J:D.106
CLA.138: 3 residues within 4Å:- Chain K: E.38, R.41
- Ligands: LUT.137
3 PLIP interactions:3 interactions with chain K,- Hydrophobic interactions: K:E.38
- Salt bridges: K:R.41
- Metal complexes: K:E.38
CLA.141: 9 residues within 4Å:- Chain L: R.64, F.65, G.91, D.92, P.93, F.96, L.98, T.101
- Ligands: BCR.145
8 PLIP interactions:8 interactions with chain L,- Hydrophobic interactions: L:R.64, L:F.65, L:F.96, L:F.96, L:L.98, L:T.101
- pi-Cation interactions: L:R.64
- Metal complexes: L:D.92
CLA.143: 9 residues within 4Å:- Chain L: L.111, G.118, N.121, T.122
- Ligands: CLA.18, CLA.19, CLA.36, CLA.37, BCR.51
4 PLIP interactions:3 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: L:L.111, L:N.121, L:T.122
- Metal complexes: H2O.27
CLA.144: 9 residues within 4Å:- Chain A: F.262
- Chain L: Y.43, N.49, M.52, I.53, T.56, T.57, H.109
- Ligands: BCR.145
6 PLIP interactions:5 interactions with chain L, 1 interactions with chain A,- Hydrophobic interactions: L:M.52, A:F.262
- Hydrogen bonds: L:Y.43, L:N.49, L:T.56
- Metal complexes: L:H.109
CLA.148: 22 residues within 4Å:- Chain M: L.55, S.59, G.61, D.62, F.63, G.64, F.65, A.71, F.77, F.80, K.81, S.83, E.84, H.87, R.193, M.196, L.197, V.200
- Ligands: CLA.98, CLA.149, XAT.162, LHG.164
14 PLIP interactions:14 interactions with chain M,- Hydrophobic interactions: M:F.63, M:F.77, M:F.80, M:K.81, M:H.87, M:R.193, M:M.196, M:L.197, M:V.200
- Hydrogen bonds: M:F.63, M:G.64, M:F.65
- pi-Cation interactions: M:R.193
- Metal complexes: M:E.84
CLA.149: 10 residues within 4Å:- Chain M: F.80, S.83, H.87
- Ligands: CLA.79, CLA.98, LMU.146, CLA.148, CHL.152, CLA.154, XAT.162
1 PLIP interactions:1 interactions with chain M,- Metal complexes: M:H.87
CLA.150: 11 residues within 4Å:- Chain M: L.93, G.97, P.101, L.106, A.112, T.124, Y.125, L.126
- Ligands: CLA.151, XAT.162, LUT.163
4 PLIP interactions:3 interactions with chain M, 1 Ligand-Water interactions,- Hydrophobic interactions: M:P.101, M:Y.125
- Hydrogen bonds: M:L.126
- Metal complexes: H2O.27
CLA.151: 11 residues within 4Å:- Chain M: W.115, A.116, A.123, W.132, I.138, I.141, E.142, I.146
- Ligands: CLA.150, CHL.152, LUT.163
8 PLIP interactions:8 interactions with chain M,- Hydrophobic interactions: M:W.115, M:A.116, M:A.123, M:I.138, M:I.138, M:I.141, M:E.142, M:I.146
CLA.153: 11 residues within 4Å:- Chain M: Y.86, R.89, W.90, F.148, Q.152, R.153, E.156, P.165, F.169
- Ligands: CLA.155, LMU.165
6 PLIP interactions:5 interactions with chain M, 1 Ligand-Water interactions,- Hydrophobic interactions: M:F.148, M:Q.152, M:P.165, M:P.165
- Hydrogen bonds: M:R.89
- Metal complexes: H2O.27
CLA.154: 17 residues within 4Å:- Chain M: R.79, E.82, S.83, Y.86, H.87, W.90, F.143, I.146, A.147, E.150, Q.151, R.153, T.154
- Ligands: CLA.79, LMU.136, LMU.146, CLA.149
11 PLIP interactions:11 interactions with chain M,- Hydrophobic interactions: M:Y.86, M:W.90, M:F.143, M:I.146, M:A.147, M:T.154
- Hydrogen bonds: M:R.79
- Salt bridges: M:R.153
- pi-Stacking: M:Y.86
- pi-Cation interactions: M:R.153
- Metal complexes: M:E.150
CLA.155: 13 residues within 4Å:- Chain M: R.89, M.92, Y.164, P.165, F.169, F.174, F.181, L.184, K.185, E.188
- Ligands: CLA.153, CLA.157, LUT.161
9 PLIP interactions:9 interactions with chain M,- Hydrophobic interactions: M:M.92, M:F.169, M:F.174, M:F.181, M:L.184, M:K.185, M:E.188
- pi-Cation interactions: M:R.89
- Metal complexes: M:E.188
CLA.156: 8 residues within 4Å:- Chain M: L.186, K.187, K.190, N.191
- Ligands: CLA.157, CLA.158, LHG.164, BCR.218
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:K.190
- Hydrogen bonds: M:N.191
- Salt bridges: M:K.187, M:K.190
- pi-Cation interactions: M:K.190
CLA.157: 6 residues within 4Å:- Chain M: K.187, N.191, L.194
- Ligands: CLA.155, CLA.156, LUT.161
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:K.187, M:L.194
- Hydrogen bonds: M:K.187
- Salt bridges: M:K.187, M:K.187
CLA.158: 15 residues within 4Å:- Chain M: L.197, G.201, V.204, Q.205, Y.209, N.217, L.218, H.221, N.229, I.230
- Ligands: CHL.147, CLA.156, CLA.159, LUT.161, LHG.164
3 PLIP interactions:3 interactions with chain M,- Hydrophobic interactions: M:V.204, M:I.230, M:I.230
CLA.159: 10 residues within 4Å:- Chain M: H.221, L.222, P.225, W.226, N.229
- Chain P: T.134, V.137, I.141
- Ligands: CHL.147, CLA.158
4 PLIP interactions:3 interactions with chain M, 1 interactions with chain P,- Hydrophobic interactions: M:P.225, M:W.226, P:T.134
- Metal complexes: M:H.221
CLA.160: 8 residues within 4Å:- Chain M: V.234, I.235, P.236
- Chain P: F.136
- Ligands: CLA.124, LMU.127, LHG.164, C7Z.167
3 PLIP interactions:1 interactions with chain P, 2 interactions with chain M,- Hydrophobic interactions: P:F.136, M:I.235
- Metal complexes: M:V.234
CLA.168: 18 residues within 4Å:- Chain N: I.8, W.9, F.10, P.11, F.27, F.29
- Chain O: A.156, G.159, F.160, H.163, R.164, M.175
- Ligands: LMG.57, CLA.169, CLA.180, LHG.184, CLA.197, BCR.198
11 PLIP interactions:8 interactions with chain N, 3 interactions with chain O,- Hydrophobic interactions: N:W.9, N:W.9, N:F.10, N:P.11, N:F.27, N:F.29, O:F.160
- pi-Stacking: N:W.9
- Metal complexes: N:W.9
- Hydrogen bonds: O:R.164
- Salt bridges: O:H.163
CLA.169: 20 residues within 4Å:- Chain N: L.19, P.24, G.25, D.26, F.27, G.28, F.29, D.30, L.34, G.35, N.44, V.45, E.48, H.51, R.168, M.171, F.179
- Ligands: CLA.168, CLA.170, XAT.183
13 PLIP interactions:13 interactions with chain N,- Hydrophobic interactions: N:F.29, N:L.34, N:N.44, N:V.45, N:H.51, N:F.179
- Hydrogen bonds: N:F.27, N:G.28, N:F.29, N:N.44
- Salt bridges: N:R.168
- pi-Cation interactions: N:R.168
- Metal complexes: N:E.48
CLA.170: 8 residues within 4Å:- Chain N: W.43, A.47, H.51, M.175
- Ligands: CLA.169, CHL.173, CLA.175, XAT.183
2 PLIP interactions:2 interactions with chain N,- Hydrophobic interactions: N:A.47
- Metal complexes: N:H.51
CLA.171: 7 residues within 4Å:- Chain N: L.57, G.61, L.74, T.76, P.77
- Ligands: CHL.172, XAT.183
1 PLIP interactions:1 interactions with chain N,- Hydrophobic interactions: N:L.74
CLA.175: 15 residues within 4Å:- Chain N: W.43, Q.46, A.47, H.51, W.54, E.98, L.99, I.102, G.103, E.106, R.109, W.110
- Ligands: CLA.170, CHL.172, CLA.201
9 PLIP interactions:9 interactions with chain N,- Hydrophobic interactions: N:W.54, N:L.99, N:E.106, N:E.106, N:W.110, N:W.110
- Hydrogen bonds: N:H.51
- Salt bridges: N:R.109
- Metal complexes: N:E.106
CLA.176: 13 residues within 4Å:- Chain N: R.53, M.56, L.57, Y.137, P.138, F.143, D.144, Y.148, L.159, E.163
- Ligands: CHL.174, CLA.178, LUT.182
8 PLIP interactions:8 interactions with chain N,- Hydrophobic interactions: N:R.53, N:R.53, N:M.56, N:L.57, N:L.159, N:E.163
- pi-Cation interactions: N:R.53
- Metal complexes: N:E.163
CLA.177: 8 residues within 4Å:- Chain N: E.158, K.162, K.165, N.166
- Chain O: L.181
- Ligands: CLA.178, LHG.184, BCR.198
5 PLIP interactions:1 interactions with chain O, 4 interactions with chain N,- Hydrophobic interactions: O:L.181, N:K.165
- Hydrogen bonds: N:N.166
- Salt bridges: N:K.165
- pi-Cation interactions: N:K.165
CLA.178: 7 residues within 4Å:- Chain N: K.162, N.166, L.169
- Ligands: CLA.176, CLA.177, CLA.179, LUT.182
4 PLIP interactions:4 interactions with chain N,- Hydrophobic interactions: N:K.162, N:L.169
- Salt bridges: N:K.162, N:K.162
CLA.179: 13 residues within 4Å:- Chain N: L.172, G.176, F.179, Q.180, T.184, N.191, H.195, T.203, I.204
- Ligands: CLA.178, CLA.180, LUT.182, LHG.184
4 PLIP interactions:4 interactions with chain N,- Hydrophobic interactions: N:F.179, N:Q.180
- Hydrogen bonds: N:T.184, N:I.204
CLA.180: 11 residues within 4Å:- Chain N: H.195, L.196, P.199, T.203, I.204, F.205
- Chain O: T.149, F.153
- Ligands: CLA.168, CLA.179, LHG.184
6 PLIP interactions:3 interactions with chain N, 3 interactions with chain O,- Hydrophobic interactions: N:L.196, N:P.199, O:T.149, O:F.153, O:F.153
- Metal complexes: N:H.195
CLA.187: 10 residues within 4Å:- Chain O: F.85, W.90, L.91, N.98, F.232
- Ligands: CLA.11, CLA.14, CHL.186, CLA.192, LUT.200
2 PLIP interactions:2 interactions with chain O,- Hydrophobic interactions: O:F.85, O:F.232
CLA.188: 7 residues within 4Å:- Chain O: M.104, A.111, T.125, Y.143
- Ligands: CLA.189, BCR.198, LUT.200
1 PLIP interactions:1 interactions with chain O,- Hydrophobic interactions: O:A.111
CLA.189: 12 residues within 4Å:- Chain O: A.132, A.134, Y.143, W.144, L.150, F.153, E.154, I.158
- Ligands: CLA.188, CLA.190, BCR.198, LUT.200
6 PLIP interactions:5 interactions with chain O, 1 Ligand-Water interactions,- Hydrophobic interactions: O:A.134, O:Y.143, O:Y.143, O:L.150, O:I.158
- Metal complexes: H2O.27
CLA.190: 10 residues within 4Å:- Chain O: G.133, A.134, I.135, P.136, P.137, Y.148, E.154
- Ligands: CLA.17, CLA.189, LUT.200
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:I.135, O:P.137
- Metal complexes: O:A.134
CLA.192: 13 residues within 4Å:- Chain O: F.85, W.90, G.94, F.97, N.98, M.155, G.159, E.162, H.163, R.165, L.166
- Ligands: CLA.187, CLA.197
9 PLIP interactions:9 interactions with chain O,- Hydrophobic interactions: O:F.97, O:E.162, O:E.162, O:L.166
- Hydrogen bonds: O:N.98
- Salt bridges: O:R.165
- pi-Stacking: O:F.97, O:F.97
- Metal complexes: O:E.162
CLA.193: 17 residues within 4Å:- Chain O: R.100, M.103, Y.195, P.196, G.197, F.201, N.202, F.206, M.214, L.217, K.218, K.220, E.221, N.224
- Ligands: CHL.191, CLA.194, LUT.199
11 PLIP interactions:11 interactions with chain O,- Hydrophobic interactions: O:R.100, O:R.100, O:M.103, O:L.217, O:K.218, O:K.220, O:E.221, O:N.224
- Hydrogen bonds: O:G.197
- pi-Cation interactions: O:R.100
- Metal complexes: O:E.221
CLA.194: 5 residues within 4Å:- Chain O: K.220, N.224, L.227
- Ligands: CLA.193, LUT.199
4 PLIP interactions:4 interactions with chain O,- Hydrophobic interactions: O:K.220, O:L.227
- Salt bridges: O:K.220, O:K.220
CLA.195: 11 residues within 4Å:- Chain O: L.230, L.233, G.234, L.237, Q.238, N.249, L.250, H.253, N.261
- Ligands: CLA.196, LUT.199
8 PLIP interactions:8 interactions with chain O,- Hydrophobic interactions: O:L.233, O:L.237, O:Q.238, O:L.250, O:H.253
- Hydrogen bonds: O:N.249, O:N.261
- Salt bridges: O:H.253
CLA.196: 6 residues within 4Å:- Chain O: H.253, L.254, P.257, N.260, N.261
- Ligands: CLA.195
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:P.257, O:P.257
- Metal complexes: O:H.253
CLA.197: 6 residues within 4Å:- Chain O: H.163, L.166
- Ligands: CLA.56, LMG.57, CLA.168, CLA.192
1 PLIP interactions:1 interactions with chain O,- Metal complexes: O:H.163
CLA.201: 15 residues within 4Å:- Chain N: I.100, G.103, W.104, G.107, R.108
- Chain P: A.49, W.50, L.51, P.52, N.68, F.70
- Ligands: CLA.175, CLA.202, LMG.219, LMG.220
9 PLIP interactions:7 interactions with chain P, 2 interactions with chain N,- Hydrophobic interactions: P:W.50, P:W.50, P:L.51, P:P.52, P:F.70, N:W.104
- pi-Stacking: P:W.50
- Metal complexes: P:W.50
- Hydrogen bonds: N:R.108
CLA.202: 21 residues within 4Å:- Chain P: L.60, A.65, G.66, D.67, N.68, G.69, F.70, D.71, L.75, A.76, F.85, V.86, A.88, E.89, N.92, R.203, M.206
- Ligands: CLA.201, CLA.203, QDL.217, LMG.219
12 PLIP interactions:12 interactions with chain P,- Hydrophobic interactions: P:L.75, P:F.85, P:V.86, P:A.88, P:N.92, P:R.203, P:M.206
- Hydrogen bonds: P:N.68, P:F.70
- Salt bridges: P:R.203
- pi-Cation interactions: P:R.203
- Metal complexes: P:E.89
CLA.203: 15 residues within 4Å:- Chain I: Y.112, F.154, P.157, V.158, Y.161
- Chain P: W.84, N.92, F.209
- Ligands: CLA.88, CLA.89, CLA.202, CHL.206, CLA.208, QDL.217, LMU.223
6 PLIP interactions:5 interactions with chain I, 1 interactions with chain P,- Hydrophobic interactions: I:Y.112, I:F.154, I:V.158, I:Y.161, I:Y.161, P:F.209
CLA.204: 10 residues within 4Å:- Chain P: G.102, I.105, P.106, A.117, P.118, A.123
- Ligands: CHL.205, QDL.217, BCR.218, DGD.222
3 PLIP interactions:2 interactions with chain P, 1 Ligand-Water interactions,- Hydrophobic interactions: P:I.105, P:A.123
- Metal complexes: H2O.27
CLA.208: 18 residues within 4Å:- Chain P: W.84, Q.87, A.88, V.91, N.92, W.95, E.139, F.140, F.143, H.144, E.147, R.150, W.151
- Ligands: C7Z.167, CLA.203, CHL.205, CLA.214, LMU.223
10 PLIP interactions:10 interactions with chain P,- Hydrophobic interactions: P:V.91, P:W.95, P:F.140, P:F.143, P:E.147, P:E.147, P:W.151
- Hydrogen bonds: P:N.92
- Salt bridges: P:R.150
- Metal complexes: P:E.147
CLA.209: 15 residues within 4Å:- Chain P: R.94, M.97, Y.178, P.179, G.180, F.183, N.184, F.188, P.190, K.195, E.198, N.201
- Ligands: CHL.207, CLA.211, LUT.216
8 PLIP interactions:8 interactions with chain P,- Hydrophobic interactions: P:R.94, P:F.188, P:K.195, P:E.198, P:E.198, P:N.201
- pi-Cation interactions: P:R.94
- Metal complexes: P:E.198
CLA.210: 7 residues within 4Å:- Chain P: E.196, K.197, A.200, N.201
- Ligands: CLA.211, CLA.212, LMG.219
2 PLIP interactions:2 interactions with chain P,- Hydrophobic interactions: P:A.200
- Hydrogen bonds: P:N.201
CLA.211: 7 residues within 4Å:- Chain P: K.197, N.201, L.204
- Ligands: CLA.209, CLA.210, CLA.212, LUT.216
3 PLIP interactions:3 interactions with chain P,- Hydrophobic interactions: P:L.204
- Salt bridges: P:K.197, P:K.197
CLA.212: 15 residues within 4Å:- Chain P: L.207, G.211, V.214, Q.215, T.219, N.226, L.227, H.230, T.238, I.239, T.242
- Ligands: CLA.210, CLA.211, CLA.213, LUT.216
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:V.214, P:Q.215, P:L.227
- Hydrogen bonds: P:I.239
CLA.213: 8 residues within 4Å:- Chain N: V.96, V.97
- Chain P: H.230, L.231, P.234, W.235, T.238
- Ligands: CLA.212
4 PLIP interactions:1 interactions with chain N, 3 interactions with chain P,- Hydrophobic interactions: N:V.97, P:P.234, P:W.235
- Metal complexes: P:H.230
CLA.214: 9 residues within 4Å:- Chain P: F.140, H.144, W.151
- Ligands: CHL.147, LHG.164, LMU.166, C7Z.167, CLA.208, LMU.221
4 PLIP interactions:4 interactions with chain P,- Hydrophobic interactions: P:F.140, P:W.151
- pi-Stacking: P:F.140
- Metal complexes: P:H.144
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.44: 12 residues within 4Å:- Chain A: M.683, F.684, S.687, R.689, W.692, A.716, L.717
- Ligands: CLA.4, CLA.41, CLA.42, CLA.55, BCR.120
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:F.684, A:F.684, A:R.689, A:W.692, A:L.717
- Hydrogen bonds: A:S.687, A:L.717
- pi-Stacking: A:W.692
PQN.97: 15 residues within 4Å:- Chain B: M.662, F.663, S.666, W.667, R.668, W.671, A.699, L.700, A.705
- Ligands: CLA.34, CLA.43, CLA.95, CLA.96, DGD.104, BCR.118
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:F.663, B:R.668, B:W.671, B:W.671, B:W.671, B:L.700, B:A.705
- Hydrogen bonds: B:L.700
- 6 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.46: 21 residues within 4Å:- Chain A: W.47, N.48, H.50, A.51, D.52, R.570, W.587, L.594, S.718, I.720, Q.721, A.724, T.728, L.731
- Ligands: CLA.5, CLA.7, CLA.12, CLA.29, CLA.31, CLA.42, BCR.52
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:W.47, A:W.587, A:L.594, A:L.731
- Hydrogen bonds: A:D.52, A:R.570, A:S.718
- Water bridges: A:R.570
- Salt bridges: A:R.570, A:R.570
LHG.47: 7 residues within 4Å:- Chain A: G.328, P.329, R.426
- Ligands: CLA.25, CLA.32, CLA.45, BCR.50
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.327, A:R.426, A:R.426
LHG.105: 10 residues within 4Å:- Chain B: P.310, P.311, G.312, R.314
- Chain M: G.69, L.70, T.72
- Ligands: CLA.76, CLA.83, CLA.98
7 PLIP interactions:3 interactions with chain M, 4 interactions with chain B- Hydrogen bonds: M:L.70, M:T.72, M:T.72, B:G.312, B:R.314
- Salt bridges: B:R.314, B:R.314
LHG.106: 14 residues within 4Å:- Chain B: E.2, R.7, H.34, D.35, R.41, N.45, A.48, G.52, I.56, L.150, L.157
- Chain G: Y.29
- Ligands: CLA.62, CLA.65
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain G- Hydrophobic interactions: B:A.48, B:I.56, B:L.150, B:L.150, B:L.157
- Hydrogen bonds: B:H.34, B:R.41
- Water bridges: G:Y.29
LHG.164: 9 residues within 4Å:- Chain M: K.190, L.197
- Ligands: CHL.147, CLA.148, CLA.156, CLA.158, CLA.160, CLA.214, BCR.218
3 PLIP interactions:3 interactions with chain M- Hydrophobic interactions: M:L.197
- Salt bridges: M:K.190, M:K.190
LHG.184: 8 residues within 4Å:- Chain N: P.7, K.165
- Ligands: LMG.57, CLA.168, CLA.177, CLA.179, CLA.180, BCR.198
1 PLIP interactions:1 interactions with chain N- Salt bridges: N:K.165
- 23 x BCR: BETA-CAROTENE(Non-covalent)
BCR.48: 10 residues within 4Å:- Chain A: T.159, A.163, L.205, L.208, S.209
- Ligands: CLA.6, CLA.15, CLA.16, BCR.49, BCR.142
Ligand excluded by PLIPBCR.49: 6 residues within 4Å:- Chain A: G.201
- Ligands: CLA.6, CLA.7, CLA.14, CLA.30, BCR.48
Ligand excluded by PLIPBCR.50: 9 residues within 4Å:- Chain A: A.348, S.351, L.352, A.406, F.409
- Ligands: CLA.25, CLA.36, CLA.40, LHG.47
Ligand excluded by PLIPBCR.51: 10 residues within 4Å:- Chain A: S.359, A.403, L.548
- Ligands: CLA.22, CLA.25, CLA.27, CLA.36, CLA.37, CLA.40, CLA.143
Ligand excluded by PLIPBCR.52: 15 residues within 4Å:- Chain A: F.670, G.673, F.676, V.677, L.732, W.739
- Ligands: CLA.2, CLA.9, CLA.29, CLA.31, CLA.42, LHG.46, CLA.54, CLA.89, BCR.120
Ligand excluded by PLIPBCR.99: 10 residues within 4Å:- Chain B: L.54, G.181, L.182, S.186
- Ligands: CLA.64, CLA.69, CLA.70, CLA.71, CLA.72, CLA.85
Ligand excluded by PLIPBCR.100: 7 residues within 4Å:- Chain B: L.65, G.138, F.141, L.142
- Ligands: CLA.72, CLA.73, BCR.131
Ligand excluded by PLIPBCR.101: 15 residues within 4Å:- Chain B: G.335, L.336, M.383, A.386, F.387, G.390, F.394
- Ligands: CLA.75, CLA.76, CLA.82, CLA.83, CLA.90, CLA.91, CLA.94, BCR.103
Ligand excluded by PLIPBCR.102: 10 residues within 4Å:- Chain B: W.648, F.652, W.671
- Ligands: CLA.3, CLA.34, CLA.43, CLA.61, CLA.66, CLA.67, CLA.96
Ligand excluded by PLIPBCR.103: 6 residues within 4Å:- Chain B: V.535
- Ligands: CLA.79, CLA.80, CLA.83, BCR.101, LMU.146
Ligand excluded by PLIPBCR.112: 11 residues within 4Å:- Chain G: L.16, F.18, P.19
- Ligands: CLA.3, CLA.34, CLA.65, CLA.66, CLA.67, CLA.68, CLA.95, CLA.96
Ligand excluded by PLIPBCR.114: 6 residues within 4Å:- Chain H: G.132
- Ligands: CLA.34, CLA.35, CLA.39, CLA.68, CLA.116
Ligand excluded by PLIPBCR.118: 15 residues within 4Å:- Chain B: I.25
- Chain G: L.26, F.27
- Chain H: L.140, V.143, L.144, Y.147, F.188
- Ligands: CLA.34, CLA.43, CLA.67, CLA.95, CLA.96, PQN.97, CLA.116
Ligand excluded by PLIPBCR.119: 11 residues within 4Å:- Chain H: Y.81, L.103, A.104, Y.107, S.194, I.197, W.198
- Ligands: CL0.111, CLA.115, CLA.116, CLA.117
Ligand excluded by PLIPBCR.120: 13 residues within 4Å:- Chain B: L.427, F.431
- Chain I: P.106, L.109, F.110, I.113
- Ligands: CLA.41, CLA.42, PQN.44, BCR.52, CLA.89, CLA.121, CLA.123
Ligand excluded by PLIPBCR.125: 7 residues within 4Å:- Chain A: L.706
- Chain I: V.93
- Ligands: CLA.82, CLA.88, CLA.93, CLA.121, LMU.122
Ligand excluded by PLIPBCR.131: 18 residues within 4Å:- Chain B: L.188, L.222, L.225, F.282, L.285, I.286, H.289
- Chain J: A.117, W.118, S.120, I.121, I.124
- Ligands: CLA.73, CLA.77, CLA.78, CLA.79, BCR.100, BCR.135
Ligand excluded by PLIPBCR.135: 12 residues within 4Å:- Chain J: L.60, V.115, L.116, G.119, S.120, H.123, I.124, Y.127
- Ligands: CLA.77, BCR.131, CLA.133, CLA.134
Ligand excluded by PLIPBCR.139: 7 residues within 4Å:- Chain K: N.40
- Ligands: CLA.4, CLA.8, CLA.9, CLA.10, CLA.29, CLA.89
Ligand excluded by PLIPBCR.142: 17 residues within 4Å:- Chain A: F.261, F.262, I.300, L.303, H.307, I.315
- Chain L: M.59, P.69, A.103, S.106, V.107
- Chain O: K.267
- Ligands: CLA.16, CLA.21, CLA.24, BCR.48, BCR.145
Ligand excluded by PLIPBCR.145: 8 residues within 4Å:- Chain L: L.102, G.105, S.106, H.109, I.110
- Ligands: CLA.141, BCR.142, CLA.144
Ligand excluded by PLIPBCR.198: 8 residues within 4Å:- Chain O: L.157, F.160, F.180
- Ligands: CLA.168, CLA.177, LHG.184, CLA.188, CLA.189
Ligand excluded by PLIPBCR.218: 11 residues within 4Å:- Chain P: L.142, F.143, Y.145, V.146
- Ligands: CHL.147, CLA.156, LHG.164, CLA.204, CHL.205, CHL.207, DGD.222
Ligand excluded by PLIP- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.53: 9 residues within 4Å:- Chain A: C.573, G.575, P.576, C.582, R.723
- Chain B: C.559, G.561, P.562, C.568
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A,- Metal complexes: B:C.559, B:C.568, A:C.573, A:C.582
SF4.108: 12 residues within 4Å:- Chain C: C.21, P.22, T.23, V.25, C.48, V.49, G.50, C.51, K.52, R.53, C.54, V.67
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.21, C:C.48, C:C.51, C:C.54
SF4.109: 10 residues within 4Å:- Chain C: C.11, I.12, G.13, C.14, T.15, C.17, C.58, P.59, S.64, V.65
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.11, C:C.14, C:C.17, C:C.58
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.57: 13 residues within 4Å:- Chain A: K.20, T.21, S.22, F.23, E.24
- Chain K: S.10, D.13
- Chain N: P.31
- Ligands: CLA.12, CLA.56, CLA.168, LHG.184, CLA.197
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain K- Hydrogen bonds: A:K.20, A:F.23, A:E.24, K:S.10, K:S.10
LMG.129: 12 residues within 4Å:- Chain I: R.137, I.141, D.142, V.143, E.144
- Chain K: R.12, K.15, T.16, S.19, L.24, L.27
- Ligands: CLA.55
9 PLIP interactions:5 interactions with chain K, 4 interactions with chain I- Hydrophobic interactions: K:L.24, K:L.27
- Hydrogen bonds: K:T.16, K:S.19, I:R.137, I:R.137, I:I.141, I:V.143
- Salt bridges: K:K.15
LMG.219: 12 residues within 4Å:- Chain N: I.100, W.104
- Chain P: G.66, E.196, L.199, A.200, R.203, L.204, L.207
- Ligands: CLA.201, CLA.202, CLA.210
1 PLIP interactions:1 interactions with chain N- Hydrophobic interactions: N:I.100
LMG.220: 6 residues within 4Å:- Chain P: L.54, A.55, P.72, L.207
- Ligands: CLA.123, CLA.201
3 PLIP interactions:2 interactions with chain P, 1 interactions with chain I- Hydrophobic interactions: P:L.207
- Hydrogen bonds: P:A.55, I:R.152
- 18 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)(Non-functional Binders)
LMU.58: 3 residues within 4Å:- Chain A: W.116
- Ligands: CLA.8, LUT.137
Ligand excluded by PLIPLMU.59: 6 residues within 4Å:- Chain A: Q.475, L.476, Q.477, H.535
- Ligands: CLA.39, LMU.113
Ligand excluded by PLIPLMU.107: 3 residues within 4Å:- Chain B: F.66, W.70, Y.136
Ligand excluded by PLIPLMU.110: 8 residues within 4Å:- Chain F: V.67, S.68, S.70, A.71, S.72, L.76
- Chain H: Q.127
- Ligands: CLA.68
Ligand excluded by PLIPLMU.113: 7 residues within 4Å:- Chain A: H.448, I.474
- Chain H: L.115, T.116, R.120
- Ligands: CLA.34, LMU.59
Ligand excluded by PLIPLMU.122: 7 residues within 4Å:- Chain A: K.705
- Chain I: V.170, D.172, D.173
- Ligands: CLA.88, BCR.125, LMU.128
Ligand excluded by PLIPLMU.126: 9 residues within 4Å:- Chain B: W.462, F.474
- Chain I: D.21, I.22, R.98
- Ligands: CLA.90, CLA.92, CLA.124, LMU.127
Ligand excluded by PLIPLMU.127: 6 residues within 4Å:- Chain I: D.96, Q.97, R.98
- Ligands: CLA.124, LMU.126, CLA.160
Ligand excluded by PLIPLMU.128: 7 residues within 4Å:- Chain I: W.164, I.165, G.167, V.170, D.172
- Ligands: LMU.122, C7Z.167
Ligand excluded by PLIPLMU.132: 3 residues within 4Å:- Chain J: R.94
- Ligands: CLA.69, CLA.71
Ligand excluded by PLIPLMU.136: 8 residues within 4Å:- Chain J: F.70, E.73
- Chain M: E.142, F.143, Q.151
- Ligands: CLA.79, LMU.146, CLA.154
Ligand excluded by PLIPLMU.146: 7 residues within 4Å:- Chain M: R.79
- Ligands: CLA.79, CLA.98, BCR.103, LMU.136, CLA.149, CLA.154
Ligand excluded by PLIPLMU.165: 6 residues within 4Å:- Chain M: E.156, G.166, G.167, F.169
- Ligands: CLA.153, LUT.163
Ligand excluded by PLIPLMU.166: 4 residues within 4Å:- Chain M: W.45, P.67
- Ligands: CLA.214, LMU.221
Ligand excluded by PLIPLMU.185: 4 residues within 4Å:- Chain N: T.91, T.92, F.95
- Ligands: CHL.173
Ligand excluded by PLIPLMU.221: 5 residues within 4Å:- Chain P: W.151, K.155
- Ligands: LMU.166, C7Z.167, CLA.214
Ligand excluded by PLIPLMU.223: 9 residues within 4Å:- Chain P: K.125, G.126, S.132, S.133, F.136
- Ligands: CLA.203, CHL.206, CLA.208, LMU.224
Ligand excluded by PLIPLMU.224: 2 residues within 4Å:- Ligands: CHL.206, LMU.223
Ligand excluded by PLIP- 3 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.104: 17 residues within 4Å:- Chain B: S.9, L.12, W.22, F.23, A.26, S.33, W.573, F.576, S.701, Q.704, L.707, S.714
- Ligands: CLA.64, CLA.84, CLA.86, CLA.96, PQN.97
14 PLIP interactions:13 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:W.22, B:F.23, B:A.26, B:F.576, B:Q.704, B:L.707
- Hydrogen bonds: B:S.9, B:S.33, B:S.701
- Water bridges: B:Q.10, B:G.11, B:G.11, B:S.556, C:E.72
DGD.140: 23 residues within 4Å:- Chain B: H.432, T.433, H.521
- Chain I: R.71, N.75, K.78, F.79, L.91, E.102, F.103, P.106
- Chain K: F.43, P.44, D.45, A.46, L.47, S.48, F.49, P.50, F.51
- Ligands: CLA.89, CLA.93, CLA.121
15 PLIP interactions:9 interactions with chain I, 5 interactions with chain K, 1 interactions with chain B- Hydrophobic interactions: I:L.91, I:F.103, I:F.103, I:P.106, I:P.106, K:F.43, K:F.51, K:F.51, B:H.432
- Hydrogen bonds: I:R.71, I:K.78, K:F.43, K:P.44
- Water bridges: I:N.75
- Salt bridges: I:K.78
DGD.222: 4 residues within 4Å:- Chain P: E.127
- Ligands: CLA.204, LUT.216, BCR.218
1 PLIP interactions:1 interactions with chain P- Hydrogen bonds: P:E.127
- 7 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.137: 12 residues within 4Å:- Chain A: W.116, I.118
- Chain K: Y.17, P.22, V.23, T.26, G.30, I.37
- Ligands: CLA.4, CLA.12, LMU.58, CLA.138
6 PLIP interactions:2 interactions with chain K, 4 interactions with chain A- Hydrophobic interactions: K:T.26, K:I.37, A:W.116, A:W.116, A:W.116, A:I.118
LUT.161: 16 residues within 4Å:- Chain M: M.92, V.95, F.169, D.170, L.172, F.174, N.191, A.195, A.198, F.202, Q.205, P.214, L.218
- Ligands: CLA.155, CLA.157, CLA.158
9 PLIP interactions:9 interactions with chain M- Hydrophobic interactions: M:M.92, M:V.95, M:A.195, M:A.198, M:F.202, M:L.218
- Hydrogen bonds: M:D.170, M:Q.205, M:P.214
LUT.163: 6 residues within 4Å:- Chain J: F.65
- Chain M: Y.125, F.148
- Ligands: CLA.150, CLA.151, LMU.165
3 PLIP interactions:1 interactions with chain M, 2 interactions with chain J- Hydrogen bonds: M:Y.125
- Hydrophobic interactions: J:F.65, J:F.65
LUT.182: 18 residues within 4Å:- Chain N: M.56, A.60, F.63, F.143, D.144, P.145, L.146, N.166, L.169, A.170, A.173, Q.180, P.188, N.191
- Ligands: CHL.174, CLA.176, CLA.178, CLA.179
11 PLIP interactions:11 interactions with chain N- Hydrophobic interactions: N:M.56, N:A.60, N:F.63, N:F.63, N:L.146, N:L.169, N:A.170, N:A.173
- Hydrogen bonds: N:L.146, N:Q.180, N:P.188
LUT.199: 17 residues within 4Å:- Chain O: M.103, V.106, V.107, F.201, N.202, P.203, L.204, F.206, N.224, L.227, A.231, M.235, Q.238, P.246
- Ligands: CLA.193, CLA.194, CLA.195
7 PLIP interactions:7 interactions with chain O- Hydrophobic interactions: O:V.106, O:F.206, O:L.227, O:A.231
- Hydrogen bonds: O:L.204, O:Q.238, O:P.246
LUT.200: 17 residues within 4Å:- Chain O: F.71, D.72, P.73, L.74, N.98, T.101, A.102, M.104, G.105, M.109, M.229, F.232
- Ligands: CHL.186, CLA.187, CLA.188, CLA.189, CLA.190
9 PLIP interactions:9 interactions with chain O- Hydrophobic interactions: O:F.71, O:L.74, O:T.101, O:A.102, O:M.229, O:F.232, O:F.232, O:F.232
- Hydrogen bonds: O:L.74
LUT.216: 19 residues within 4Å:- Chain P: M.97, V.100, A.101, N.184, P.185, L.186, N.187, F.188, N.201, L.204, A.205, A.208, F.212, Q.215, P.223
- Ligands: CLA.209, CLA.211, CLA.212, DGD.222
12 PLIP interactions:12 interactions with chain P- Hydrophobic interactions: P:M.97, P:A.101, P:L.186, P:F.188, P:L.204, P:A.205, P:A.208, P:F.212
- Hydrogen bonds: P:L.186, P:N.187, P:Q.215, P:P.223
- 12 x CHL: CHLOROPHYLL B(Non-covalent)
CHL.147: 16 residues within 4Å:- Chain M: E.44, W.45, F.46, P.47, F.63
- Chain P: I.141, H.144, Y.145, I.148, R.149, V.160
- Ligands: CLA.158, CLA.159, LHG.164, CLA.214, BCR.218
14 PLIP interactions:6 interactions with chain P, 8 interactions with chain M,- Hydrophobic interactions: P:I.141, P:Y.145, P:I.148, M:E.44, M:W.45, M:W.45, M:F.46, M:P.47, M:F.63
- Hydrogen bonds: P:H.144, P:R.149
- Salt bridges: P:R.149
- pi-Stacking: M:W.45
- Metal complexes: M:W.45
CHL.152: 8 residues within 4Å:- Chain M: V.110, Q.113, A.116, A.117, E.142
- Ligands: CLA.149, CLA.151, XAT.162
1 PLIP interactions:1 interactions with chain M,- Hydrophobic interactions: M:A.116
CHL.172: 8 residues within 4Å:- Chain N: G.83, Y.87, L.94, V.97, E.98
- Ligands: CLA.171, CHL.173, CLA.175
3 PLIP interactions:2 interactions with chain N, 1 Ligand-Water interactions,- Hydrophobic interactions: N:Y.87, N:Y.87
- Metal complexes: H2O.27
CHL.173: 10 residues within 4Å:- Chain N: Y.80, T.81, G.83, E.84, E.98, W.178
- Ligands: CLA.170, CHL.172, XAT.183, LMU.185
2 PLIP interactions:1 interactions with chain N, 1 Ligand-Water interactions,- Hydrophobic interactions: N:W.178
- Metal complexes: H2O.27
CHL.174: 15 residues within 4Å:- Chain N: V.50, R.53, W.54, W.104, A.105, R.108, R.109, D.112, V.119, G.136, F.143, P.145
- Ligands: CLA.176, CHL.181, LUT.182
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:R.109, N:D.112, N:F.143
- Hydrogen bonds: N:R.53
- pi-Stacking: N:F.143
CHL.181: 13 residues within 4Å:- Chain N: R.108, V.119, N.120, T.121, D.122, P.123, I.124, F.125, N.128, K.129, L.130, W.142
- Ligands: CHL.174
7 PLIP interactions:7 interactions with chain N,- Hydrophobic interactions: N:I.124, N:F.125, N:N.128, N:L.130
- pi-Stacking: N:F.125, N:W.142
- Metal complexes: N:D.122
CHL.186: 17 residues within 4Å:- Chain O: W.51, L.61, G.67, D.68, F.69, G.70, F.71, D.72, L.76, S.77, L.91, E.95, R.226, M.229, L.233
- Ligands: CLA.187, LUT.200
12 PLIP interactions:12 interactions with chain O,- Hydrophobic interactions: O:W.51, O:F.71, O:L.76, O:L.91, O:E.95
- Hydrogen bonds: O:F.69, O:G.70, O:F.71, O:L.76, O:S.77
- pi-Cation interactions: O:R.226
- Metal complexes: O:E.95
CHL.191: 15 residues within 4Å:- Chain O: Y.93, F.97, R.100, T.101, A.161, R.164, R.165, D.168, M.175, F.180, L.187, P.193, P.196, F.201
- Ligands: CLA.193
8 PLIP interactions:7 interactions with chain O, 1 Ligand-Water interactions,- Hydrophobic interactions: O:R.165, O:D.168, O:F.180, O:P.196
- Hydrogen bonds: O:R.100
- pi-Stacking: O:F.201
- pi-Cation interactions: O:R.165
- Metal complexes: H2O.27
CHL.205: 14 residues within 4Å:- Chain P: A.123, G.124, Y.128, L.135, E.139, V.182, F.183
- Ligands: CLA.204, CHL.206, CHL.207, CLA.208, CHL.215, QDL.217, BCR.218
6 PLIP interactions:5 interactions with chain P, 1 Ligand-Water interactions,- Hydrophobic interactions: P:Y.128, P:Y.128, P:V.182, P:F.183, P:F.183
- Metal complexes: H2O.27
CHL.206: 11 residues within 4Å:- Chain P: Y.121, D.122, G.124, K.125, S.132, E.139
- Ligands: CLA.203, CHL.205, QDL.217, LMU.223, LMU.224
1 PLIP interactions:1 Ligand-Water interactions,- Metal complexes: H2O.27
CHL.207: 14 residues within 4Å:- Chain P: R.94, W.95, Y.145, V.146, R.149, R.150, D.153, V.160, F.183, P.185
- Ligands: CHL.205, CLA.209, CHL.215, BCR.218
8 PLIP interactions:8 interactions with chain P,- Hydrophobic interactions: P:Y.145, P:V.146, P:R.150, P:D.153, P:P.185
- Hydrogen bonds: P:R.94, P:R.149
- pi-Cation interactions: P:R.150
CHL.215: 14 residues within 4Å:- Chain P: Y.145, R.149, N.161, Q.162, D.163, P.164, I.165, F.166, Y.169, S.170, L.171, V.182
- Ligands: CHL.205, CHL.207
7 PLIP interactions:7 interactions with chain P,- Hydrophobic interactions: P:I.165, P:F.166, P:Y.169, P:Y.169, P:V.182
- pi-Stacking: P:Y.169
- Metal complexes: P:D.163
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.162: 17 residues within 4Å:- Chain M: F.65, D.66, P.67, L.68, H.87, A.94, G.97, V.98, W.109, Q.113, M.196, F.199, V.200
- Ligands: CLA.148, CLA.149, CLA.150, CHL.152
8 PLIP interactions:8 interactions with chain M- Hydrophobic interactions: M:L.68, M:A.94, M:V.98, M:F.199, M:V.200
- Hydrogen bonds: M:L.68, M:G.69, M:W.109
XAT.183: 14 residues within 4Å:- Chain N: F.29, D.30, P.31, W.32, W.54, G.58, I.62, M.171, V.174, M.175
- Ligands: CLA.169, CLA.170, CLA.171, CHL.173
2 PLIP interactions:2 interactions with chain N- Hydrophobic interactions: N:W.32
- Hydrogen bonds: N:W.32
- 1 x C7Z: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol(Non-covalent)
C7Z.167: 9 residues within 4Å:- Chain I: Y.161, I.165
- Chain M: S.207
- Chain P: W.151
- Ligands: LMU.128, CLA.160, CLA.208, CLA.214, LMU.221
3 PLIP interactions:1 interactions with chain P, 1 interactions with chain I, 1 interactions with chain M- Hydrophobic interactions: P:W.151, I:I.165
- Hydrogen bonds: M:S.207
- 1 x QDL: Antheraxanthin(Non-covalent)
QDL.217: 17 residues within 4Å:- Chain P: F.70, D.71, P.72, L.73, N.92, A.96, G.99, M.103, W.120, A.123, M.206, F.209
- Ligands: CLA.202, CLA.203, CLA.204, CHL.205, CHL.206
7 PLIP interactions:7 interactions with chain P- Hydrophobic interactions: P:F.70, P:L.73, P:A.96, P:W.120, P:F.209
- Hydrogen bonds: P:L.73, P:W.120
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Naschberger, A. et al., Photosystem I assembly intermediate of Avena sativa. To Be Published
- Release Date
- 2023-11-01
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit VI: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit XI: H
Photosystem I reaction center subunit III: I
Photosystem I reaction center subunit V: J
Photosystem I reaction center subunit IX: K
Photosystem I reaction center subunit X: L
Chlorophyll a-b binding protein 1, chloroplastic: M
Chlorophyll a-b binding protein 2, chloroplastic: N
Chlorophyll a-b binding protein 3, chloroplastic: O
Chlorophyll a-b binding protein 4, chloroplastic: P - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
HG
IH
LI
FJ
GK
JL
KM
1N
2O
3P
4 - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 2 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 140 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 6 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 23 x BCR: BETA-CAROTENE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 18 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)(Non-functional Binders)
- 3 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 7 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 12 x CHL: CHLOROPHYLL B(Non-covalent)
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 1 x C7Z: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol(Non-covalent)
- 1 x QDL: Antheraxanthin(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Naschberger, A. et al., Photosystem I assembly intermediate of Avena sativa. To Be Published
- Release Date
- 2023-11-01
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit VI: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit XI: H
Photosystem I reaction center subunit III: I
Photosystem I reaction center subunit V: J
Photosystem I reaction center subunit IX: K
Photosystem I reaction center subunit X: L
Chlorophyll a-b binding protein 1, chloroplastic: M
Chlorophyll a-b binding protein 2, chloroplastic: N
Chlorophyll a-b binding protein 3, chloroplastic: O
Chlorophyll a-b binding protein 4, chloroplastic: P - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
HG
IH
LI
FJ
GK
JL
KM
1N
2O
3P
4 - Membrane
-
We predict this structure to be a membrane protein.