SMTL ID : 7f9o.1

PSI-NDH supercomplex of Barley

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
273 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)
4 x PQN: PHYLLOQUINONE(Non-covalent)
11 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
51 x BCR: BETA-CAROTENE(Non-covalent)(Non-functional Binders)
7 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
4 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
7 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
12 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
23 x CHL: CHLOROPHYLL B(Non-covalent)
4 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Shen, L. et al., Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare. Nature (2022)
Release Date
2021-12-22
Peptides
Photosystem I P700 chlorophyll a apoprotein A1: Ae
Photosystem I P700 chlorophyll a apoprotein A2: Bf
Photosystem I iron-sulfur center: Cg
Photosystem I reaction center subunit II, chloroplastic: Dh
Photosystem I reaction center subunit IV, chloroplastic: Ei
Photosystem I reaction center subunit III, chloroplastic: Fj
Photosystem I reaction center subunit VI, chloroplastic: Gk
Photosystem I reaction center subunit VIII: Hl
Photosystem I reaction center subunit IX: Im
Photosystem I reaction center subunit psaK, chloroplastic: Jn
Photosystem I reaction center subunit XI, chloroplastic: Ko
Chlorophyll a-b binding protein Lhca1: Lp
Chlorophyll a-b binding protein, chloroplastic: M
Chlorophyll a-b binding protein, chloroplastic: Nq
Chlorophyll a-b binding protein Lhca5: O
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic: P
NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic: Q
NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic: R
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic: S
NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic: T
NADH-plastoquinone oxidoreductase subunit 5: U
NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic: V
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic: W
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic: X
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic: Y
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic: Z
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic: 0
NAD(P)H-quinone oxidoreductase subunit M, chloroplastic: 1
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic: 2
Unidentified stromal protein: 3
Photosynthetic NDH subunit of subcomplex L1: 4
Photosynthetic NDH subunit of subcomplex L2: 5
Photosynthetic NDH subunit of subcomplex L2: 6
Photosynthetic NDH subunit of subcomplex L4: 7
Photosynthetic NDH subunit of subcomplex L5: 8
Photosynthetic NDH subunit of subcomplex B1: 9
Photosynthetic NDH subunit of subcomplex B2: a
Photosynthetic NDH subunit of subcomplex B3: b
Photosynthetic NDH subunit of subcomplex B4: c
Photosynthetic NDH subunit of subcomplex B5: d
Chlorophyll a-b binding protein Lhca4: r
Chlorophyll a-b binding protein, chloroplastic: s
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
e
e
B
B
f
f
C
C
g
g
D
D
h
h
E
E
i
i
F
F
j
j
G
H
k
k
H
I
l
l
I
J
m
m
J
K
n
n
K
L
o
o
L
1
p
p
M
2
N
3
q
q
O
5
P
G
Q
M
R
N
S
O
T
P
U
Q
V
R
W
S
X
T
Y
U
Z
V
0
W
1
X
2
Y
3
Z
4
a
5
b
6
c
7
4
8
d
9
6
a
7
b
8
c
9
d
0
r
r
s
s
Membrane
We predict this structure to be a membrane protein.

Photosystem I P700 chlorophyll a apoprotein A1

Toggle Identical (Ae)

Photosystem I P700 chlorophyll a apoprotein A2

Toggle Identical (Bf)

Photosystem I iron-sulfur center

Toggle Identical (Cg)

Photosystem I reaction center subunit II, chloroplastic

Toggle Identical (Dh)

Photosystem I reaction center subunit IV, chloroplastic

Toggle Identical (Ei)

Photosystem I reaction center subunit III, chloroplastic

Toggle Identical (Fj)

Photosystem I reaction center subunit VI, chloroplastic

Toggle Identical (Gk)

Photosystem I reaction center subunit VIII

Toggle Identical (Hl)

Photosystem I reaction center subunit IX

Toggle Identical (Im)

Photosystem I reaction center subunit psaK, chloroplastic

Toggle Identical (Jn)

Photosystem I reaction center subunit XI, chloroplastic

Toggle Identical (Ko)

Chlorophyll a-b binding protein Lhca1

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein, chloroplastic

Toggle Identical (Nq)

Chlorophyll a-b binding protein Lhca5

NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

NADH-plastoquinone oxidoreductase subunit 5

NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

NAD(P)H-quinone oxidoreductase subunit L, chloroplastic

NAD(P)H-quinone oxidoreductase subunit M, chloroplastic

NAD(P)H-quinone oxidoreductase subunit N, chloroplastic

Unidentified stromal protein

Photosynthetic NDH subunit of subcomplex L1

Photosynthetic NDH subunit of subcomplex L2

Photosynthetic NDH subunit of subcomplex L2

Photosynthetic NDH subunit of subcomplex L4

Photosynthetic NDH subunit of subcomplex L5

Photosynthetic NDH subunit of subcomplex B1

Photosynthetic NDH subunit of subcomplex B2

Photosynthetic NDH subunit of subcomplex B3

Photosynthetic NDH subunit of subcomplex B4

Photosynthetic NDH subunit of subcomplex B5

Chlorophyll a-b binding protein Lhca4

Chlorophyll a-b binding protein, chloroplastic

Related Entries With Identical Sequence

2wsf.1 | 5zji.1 | 6z1p.7 | 7eu3.1 | 7ew6.1 | 7ewk.1 | 8bcv.1 | 8bcw.1